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CmoCh19G002060 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G002060
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNAC domain-containing protein
Genome locationCmo_Chr19:1352166..1353390
RNA-Seq ExpressionCmoCh19G002060
SyntenyCmoCh19G002060
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003441 - NAC domain
IPR036093 - NAC domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571607.1 NAC domain-containing protein 68, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6899.19Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NSTDPIFAAKTDKTIIGYRKRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

KAG6571617.1 NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6292.74Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHD PLLPVGVRFRPTDQQLLQYL WKIH QPYF+RAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS  PIFA KTDKTIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

KAG6571624.1 NAC transcription factor, partial [Cucurbita argyrosperma subsp. sororia]2.0e-6493.65Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHD PLLPVGVRFRPTDQQLLQYL WK+H QPYFKRAVLDCDLYGEMEPWE+WLRFGG DGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRFVL
        NS DPIFAAKTD TIIGYRKRFRFVL
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRFVL

XP_022963780.1 NAC transcription factor 25-like [Cucurbita moschata]2.5e-6291.94Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHD PLLPVGVRFRPTDQQLLQYL WKIHDQPYFKRAVLDCDLYG+MEPWEIWLRFGGTDGE+LYFFTKLKRSTNNSGRLS HINRKVGL NGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS +PIFAAKTDKTIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

XP_022963781.1 NAC domain-containing protein 30-like [Cucurbita moschata]3.8e-6393.55Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHDCPLLPVGVRFRPTDQQLLQYL WKIH QPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS   IFA KTDKTIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

TrEMBL top hitse value%identityAlignment
A0A6J1HH13 NAC domain-containing protein 30-like1.9e-6393.55Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHDCPLLPVGVRFRPTDQQLLQYL WKIH QPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS   IFA KTDKTIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

A0A6J1HIZ2 NAC transcription factor 25-like1.2e-6291.94Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHD PLLPVGVRFRPTDQQLLQYL WKIHDQPYFKRAVLDCDLYG+MEPWEIWLRFGGTDGE+LYFFTKLKRSTNNSGRLS HINRKVGL NGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS +PIFAAKTDKTIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

A0A6J1HSR6 NAC domain-containing protein 72-like1.3e-6190.32Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHDCPLLPVGVRF+PTD QLLQYL WKIH QPYFKRAVLDCDLYGEMEPWEIWLRFGG DGE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS  PIFA KTD TIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

A0A6J1HVP9 NAC domain-containing protein 18-like1.1e-6089.52Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDSHDCPLLPVGVRF+PTD QLLQYL WKIH QPYFKRAVLDCDLYGEMEPWEIWLRFGG DGE LYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS  PIFA KTD TIIGY KRFR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

A0A6J1HXC3 NAC transcription factor 25-like2.8e-5182.26Show/hide
Query:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
        MDS +  LLPVGVRFRPTD QLL+YL +KIH  PYFK AVLD DLYGEMEPWEIWLRFGG  GE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE
Subjt:  MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGE

Query:  NSTDPIFAAKTDKTIIGYRKRFRF
        NS  PIFA KTDK IIGY K FR+
Subjt:  NSTDPIFAAKTDKTIIGYRKRFRF

SwissProt top hitse value%identityAlignment
A0SPJ6 NAC transcription factor NAM-B21.0e-0533.33Show/hide
Query:  PLLPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGE-DLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTD
        P LP G RF PTD++L + YL+ K    P     + + DLY + +PWE  L    T GE + YFF+   R   N  R     NR     +G W    +  
Subjt:  PLLPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGE-DLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTD

Query:  PIFAAKTDKTIIGYRKRFRF
        PI A+   +  +G +K   F
Subjt:  PIFAAKTDKTIIGYRKRFRF

A2YMR0 NAC transcription factor ONAC0107.6e-0631.4Show/hide
Query:  PLLPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI--WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENST
        P LP G RF PTD++L + YL+ K    P     + + DLY + +PWE+     FG    ++ YFF+   R   N  R     NR     +G W    + 
Subjt:  PLLPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI--WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENST

Query:  DPIFAAKTDKTIIGYRKRFRF
         PI A+ + +  +G +K   F
Subjt:  DPIFAAKTDKTIIGYRKRFRF

F4JN35 Protein NTM1-like 92.2e-0533.9Show/hide
Query:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI
        LP+G RFRPTD++L+  YL+ KI+ +    R + D D+  + EPW++  L    TD  + +FF    R   N  R     NR     +G W        I
Subjt:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI

Query:  FAAKTDKTIIGYRKRFRF
           K+ KT+IG +K   F
Subjt:  FAAKTDKTIIGYRKRFRF

Q52QH4 NAC domain-containing protein 682.9e-0532.77Show/hide
Query:  LPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLR--FGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDP
        LP G RF PTD++L + YL  K+  QP     + + DLY +++PW++  +  FG    ++ YFFT   R   N  R     NR  G   G W    +  P
Subjt:  LPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLR--FGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDP

Query:  IFAAKTDKTIIGYRKRFRF
        + A K     +G +K   F
Subjt:  IFAAKTDKTIIGYRKRFRF

Q8H4S4 NAC domain-containing protein 103.8e-0529.75Show/hide
Query:  PLLPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI--WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENST
        P LP G RF PTD++L + YL+ K    P     + + DLY + +PW++     FG    ++ YFF+   R   N  R     NR     +G W    + 
Subjt:  PLLPVGVRFRPTDQQL-LQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI--WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENST

Query:  DPIFAAKTDKTIIGYRKRFRF
         PI ++ + +  +G +K   F
Subjt:  DPIFAAKTDKTIIGYRKRFRF

Arabidopsis top hitse value%identityAlignment
AT2G24430.1 NAC domain containing protein 388.4e-0833.33Show/hide
Query:  LPVGVRFRPTDQQLLQ-YLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPIF
        LP G RF PTD++L+  YL  KI DQ +  +A+ D DL  + EPWE+  +     G++ YFF+   R      R +   N       G W        IF
Subjt:  LPVGVRFRPTDQQLLQ-YLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPIF

Query:  AAKTD------KTIIGYRKR
         + T       KT++ YR R
Subjt:  AAKTD------KTIIGYRKR

AT2G24430.2 NAC domain containing protein 388.4e-0833.33Show/hide
Query:  LPVGVRFRPTDQQLLQ-YLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPIF
        LP G RF PTD++L+  YL  KI DQ +  +A+ D DL  + EPWE+  +     G++ YFF+   R      R +   N       G W        IF
Subjt:  LPVGVRFRPTDQQLLQ-YLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPIF

Query:  AAKTD------KTIIGYRKR
         + T       KT++ YR R
Subjt:  AAKTD------KTIIGYRKR

AT4G35580.1 NAC transcription factor-like 91.6e-0633.9Show/hide
Query:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI
        LP+G RFRPTD++L+  YL+ KI+ +    R + D D+  + EPW++  L    TD  + +FF    R   N  R     NR     +G W        I
Subjt:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI

Query:  FAAKTDKTIIGYRKRFRF
           K+ KT+IG +K   F
Subjt:  FAAKTDKTIIGYRKRFRF

AT4G35580.2 NAC transcription factor-like 91.6e-0633.9Show/hide
Query:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI
        LP+G RFRPTD++L+  YL+ KI+ +    R + D D+  + EPW++  L    TD  + +FF    R   N  R     NR     +G W        I
Subjt:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI

Query:  FAAKTDKTIIGYRKRFRF
           K+ KT+IG +K   F
Subjt:  FAAKTDKTIIGYRKRFRF

AT4G35580.3 NAC transcription factor-like 91.6e-0633.9Show/hide
Query:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI
        LP+G RFRPTD++L+  YL+ KI+ +    R + D D+  + EPW++  L    TD  + +FF    R   N  R     NR     +G W        I
Subjt:  LPVGVRFRPTDQQLL-QYLQWKIHDQPYFKRAVLDCDLYGEMEPWEI-WLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPI

Query:  FAAKTDKTIIGYRKRFRF
           K+ KT+IG +K   F
Subjt:  FAAKTDKTIIGYRKRFRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTCAGATTCAGACCTACTGATCAACAACTTCTTCAATATCTACAATGGAAGATTCACGACCAACCATATTTCAA
ACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGTTTTGGAGGCACCGACGGCGAAGATCTCTATTTCTTCACCAAACTCAAGA
GGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTCGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAACCGATCCAATTTTTGCTGCCAAA
ACCGATAAAACAATAATCGGCTATCGCAAACGCTTTAGGTTCGTTCTTTACTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTCAGATTCAGACCTACTGATCAACAACTTCTTCAATATCTACAATGGAAGATTCACGACCAACCATATTTCAA
ACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGTTTTGGAGGCACCGACGGCGAAGATCTCTATTTCTTCACCAAACTCAAGA
GGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTCGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCAACCGATCCAATTTTTGCTGCCAAA
ACCGATAAAACAATAATCGGCTATCGCAAACGCTTTAGGTTCGTTCTTTACTTATGA
Protein sequenceShow/hide protein sequence
MDSHDCPLLPVGVRFRPTDQQLLQYLQWKIHDQPYFKRAVLDCDLYGEMEPWEIWLRFGGTDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSTDPIFAAK
TDKTIIGYRKRFRFVLYL