CuGenDBv2

Gene ID	CmoCh19G002340
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	GTPase
Genome location	Cmo_Chr19:1642744..1646235
RNA-Seq Expression	CmoCh19G002340
Synteny	CmoCh19G002340
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6571645.1 hypothetical protein SDJN03_28373, partial [Cucurbita argyrosperma subsp. sororia]

6.6e-107

99.49

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRN+SSWISQWLNRTKPSAGIHQHPSGTNTGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

KAG7011374.1 hypothetical protein SDJN02_26279, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-105

98.46

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        MIKQVSNSYMKH+ASTRAAIGQKVDKYLSFTSSVH WPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNY+RGRFEHGIRDDIKQWMIRN
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

XP_022963557.1 uncharacterized protein LOC111463851 [Cucurbita moschata]

5.0e-107

100

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

XP_022967340.1 uncharacterized protein LOC111466890 [Cucurbita maxima]

2.2e-102

96.91

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI+HRDIKVG +VSSWISQWLNR KPSAGIHQHPSGTNTGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR
        MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVH WPKAFPTIAMI RQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR

XP_023511569.1 uncharacterized protein LOC111776368 [Cucurbita pepo subsp. pepo]

6.8e-104

97.44

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLK+TFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAH TIEHRDIKVGRNVSSWISQWLNR KPSAGIHQHPSGT+TGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKT+YRRGRFEHGIRDDIKQWMIRN
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LH53 Uncharacterized protein

2.9e-76

73.6

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGM
        MVLWEIALAT YFLGLKR FKL LKTQRR+VSP +PRIR+FL  RTRA+FDVT+K H+TI+ +DIKV RN+ SWIS+WLNR KPSA   +HPSG+ NTGM
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGM

Query:  KMIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        KM+K+VSNSY+KHRASTRA IGQK D+YL+ TSSVH WPK  FPTIAMIMRQRKP G + QHRQFSIC S G+KTN RR RF+HGIR+DI QWM++N
Subjt:  KMIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

A0A1S3CRP2 uncharacterized protein LOC103503568

3.4e-77

75.63

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGM
        MVLWEIALAT YFLGLKRTFKLVLKTQRRLVSP +PRIR+FL  RTRA+FDVT+K H+TI+ +DIK  RN+ SWIS+WLNR+KPSA   +HP+GT NTGM
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGT-NTGM

Query:  KMIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        KMIK+VSNSY+KHRASTRA IGQK D+YLS TSSVH WPK  FPTIAMIMRQRKPAG + QHRQFSI  S G+KTN RR RF+HGIR+DI QWM++N
Subjt:  KMIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKA-FPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

A0A6J1DZV3 uncharacterized protein LOC111025863 isoform X1

5.3e-70

68.21

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEI LATAYFLGLKRT+KL LK QRRLVSP HPRIR+FL  RTR+IFDV +K H+ ++H+DI+VG+N  + I QWLN+ KPSA I +H  G  TGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        MIKQVSNSY+KHRAS RA I QK D+Y+S TSS+  WPK FPT AMIMRQ KPAGT  Q+RQ+SIC SE M+TNYRRG F+  IR+DI QWM+R+
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

A0A6J1HFJ9 uncharacterized protein LOC111463851

2.4e-107

100

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
        MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

A0A6J1HU73 uncharacterized protein LOC111466890

1.1e-102

96.91

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTI+HRDIKVG +VSSWISQWLNR KPSAGIHQHPSGTNTGMK
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR
        MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVH WPKAFPTIAMI RQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR
Subjt:  MIKQVSNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G32260.1 unknown protein

1.6e-39

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPS---GTNT
        MV WEI L TAYFLGL+RT++L LK QRRLV+P HP+IR+FLHRRTR IFDV +  H+ I+ RDI+VGRN+ +WI +WL++ KP+A I   P     +N+
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPS---GTNT

Query:  GMKMIKQVS--NSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQF---SICSSEGMKTNYRRGRFEHGIRDDIKQWM
         M   K+++  +    H  +T+    ++ D++L FTS  H   K FP+++M+++  +P GT  Q+R +    + +S    +    G F   +R DI QWM
Subjt:  GMKMIKQVS--NSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQF---SICSSEGMKTNYRRGRFEHGIRDDIKQWM

AT2G35480.1 unknown protein

8.2e-39

43.88

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Query:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK
        MVLWE+AL TAYFLG++RT++L LKTQRRLVSP HPRIR F+HRRT  IFD+ L+ H+ I+ RD+ +GRN+ +WI + L+R KPSA +   P  T   + 
Subjt:  MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMK

Query:  MIKQV-SNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIM-RQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR
          K+V  ++ +K   +T+    ++VD+ L    S+  +   +P  +M+M +  +  GT  Q+R +S+  S  +K  Y RG F   IR DI QWM++
Subjt:  MIKQV-SNSYMKHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIM-RQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTGTTATGGGAGATTGCACTGGCAACAGCCTATTTCTTGGGGCTCAAGCGAACATTTAAGCTCGTTTTGAAGACTCAGCGGCGCCTTGTTTCCCCCAACCACCCTCG
GATTCGTCGATTTCTTCACCGACGAACACGAGCTATATTCGACGTTACTCTGAAAGCTCACCGGACCATTGAGCATCGTGACATAAAAGTTGGTAGGAATGTTAGCAGCT
GGATTTCGCAATGGCTTAATCGAACGAAACCGTCTGCTGGGATTCATCAACATCCCAGTGGCACTAACACAGGTATGAAAATGATAAAACAGGTCTCCAACTCGTACATG
AAACATCGAGCCAGCACTCGAGCAGCGATCGGTCAAAAAGTCGATAAATATCTATCATTTACCTCATCAGTACACGGATGGCCTAAGGCCTTCCCTACCATTGCAATGAT
CATGAGGCAACGAAAGCCTGCTGGGACTATGAATCAACACAGACAATTTAGCATTTGTAGCTCTGAAGGAATGAAAACAAATTATAGAAGAGGACGTTTCGAGCACGGTA
TTCGAGACGATATTAAGCAATGGATGATCCGAAACTAG

mRNA sequence

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Protein sequence

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MVLWEIALATAYFLGLKRTFKLVLKTQRRLVSPNHPRIRRFLHRRTRAIFDVTLKAHRTIEHRDIKVGRNVSSWISQWLNRTKPSAGIHQHPSGTNTGMKMIKQVSNSYM
KHRASTRAAIGQKVDKYLSFTSSVHGWPKAFPTIAMIMRQRKPAGTMNQHRQFSICSSEGMKTNYRRGRFEHGIRDDIKQWMIRN

CmoCh19G002340 (gene) of Cucurbita moschata (Rifu) v1 genome