; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G002770 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G002770
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPolyprotein
Genome locationCmo_Chr19:2036804..2037365
RNA-Seq ExpressionCmoCh19G002770
SyntenyCmoCh19G002770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
M1DF71 Gag-pol polyprotein3.7e-0537.35Show/hide
Query:  GFNNQQGFKTRFDLNSSKSQQQAPQRQFDLQQAPRGQFNRQPPSTIERPKCGRCGRDHDRKCIDGSRACFNYGKSEHRMADCP
        G   +QGFK RF   S++     P+   D    P+ Q      S + RP C +CGR H+ KC+ GS  C++ GKS  ++ DCP
Subjt:  GFNNQQGFKTRFDLNSSKSQQQAPQRQFDLQQAPRGQFNRQPPSTIERPKCGRCGRDHDRKCIDGSRACFNYGKSEHRMADCP
M1DRV3 Polyprotein8.2e-0538.37Show/hide
Query:  AKTQGFNNQQGFKTRFDLNSSKSQQQAPQRQFDLQQAPRGQFNRQPPSTIERPKCGRCGRDHDRKCIDGSRACFNYGKSEHRMADC
        AK+ G   +Q FK RF    S S  +   +  D    P+ Q      S + RP C +CGR H+ KC+ GS  C+  GKS H M DC
Subjt:  AKTQGFNNQQGFKTRFDLNSSKSQQQAPQRQFDLQQAPRGQFNRQPPSTIERPKCGRCGRDHDRKCIDGSRACFNYGKSEHRMADC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCGCCAAAACACAAGGGTTTAACAATCAACAAGGCTTCAAAACAAGGTTCGACCTAAACTCTTCCAAGTCTCAGCAGCAAGCTCCACAGAGACAGTTT
GATCTACAACAAGCACCACGAGGGCAGTTTAATCGACAGCCACCTTCAACTATTGAGAGACCAAAATGTGGGCGTTGTGGTAGAGATCATGATAGGAAGTGCATA
GATGGTTCAAGAGCTTGTTTTAACTATGGAAAAAGCGAGCACCGAATGGCCGACTGTCCCCATGCTCTTTGGTCCATTGGTTTCTCTGCCTTCACTACAGATATT
ACCTTTGTCATAGTTCTTTGCGAGCCAATCCATTCCCAAGATGATGTCGAACTCAACCATGTCAATGACTATCAGCGTTACCTCAAGCTGGCGTTCCGCTACTAC
TATCATTCCCTCACTGATTCTCTCCTTAGGGCATTATCGTGCCAGCTGGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCGCCAAAACACAAGGGTTTAACAATCAACAAGGCTTCAAAACAAGGTTCGACCTAAACTCTTCCAAGTCTCAGCAGCAAGCTCCACAGAGACAGTTT
GATCTACAACAAGCACCACGAGGGCAGTTTAATCGACAGCCACCTTCAACTATTGAGAGACCAAAATGTGGGCGTTGTGGTAGAGATCATGATAGGAAGTGCATA
GATGGTTCAAGAGCTTGTTTTAACTATGGAAAAAGCGAGCACCGAATGGCCGACTGTCCCCATGCTCTTTGGTCCATTGGTTTCTCTGCCTTCACTACAGATATT
ACCTTTGTCATAGTTCTTTGCGAGCCAATCCATTCCCAAGATGATGTCGAACTCAACCATGTCAATGACTATCAGCGTTACCTCAAGCTGGCGTTCCGCTACTAC
TATCATTCCCTCACTGATTCTCTCCTTAGGGCATTATCGTGCCAGCTGGAGTAG
Protein sequenceShow/hide protein sequence
MPTAKTQGFNNQQGFKTRFDLNSSKSQQQAPQRQFDLQQAPRGQFNRQPPSTIERPKCGRCGRDHDRKCIDGSRACFNYGKSEHRMADCPHALWSIGFSAFTTDI
TFVIVLCEPIHSQDDVELNHVNDYQRYLKLAFRYYYHSLTDSLLRALSCQLE