; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G003130 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003130
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationCmo_Chr19:2356529..2357275
RNA-Seq ExpressionCmoCh19G003130
SyntenyCmoCh19G003130
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571707.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. sororia]3.1e-133100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
        MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM

Query:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
        KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
Subjt:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ

Query:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

KAG7011432.1 Nuclear transcription factor Y subunit C-2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-13198.8Show/hide
Query:  MDQSERSQHQQQSQQPAGGV---GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQPAGGV   GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQPAGGV---GGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

XP_022963852.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]3.1e-133100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
        MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM

Query:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
        KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
Subjt:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ

Query:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

XP_022967619.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]3.0e-12896.81Show/hide
Query:  MDQSERSQHQQQSQQP---AGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQP   AGGVGG GGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQP---AGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR DVFDFLVDIIPRDELKEEG GITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQ RPPMPFMPWPHTQP+QQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

XP_023511463.1 nuclear transcription factor Y subunit C-2-like [Cucurbita pepo subsp. pepo]8.9e-13399.6Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
        MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM

Query:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
        KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
Subjt:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ

Query:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        HPVGATGMIMGKQLDQANVYGAT QQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein1.3e-11887.83Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQTTD
        MDQSERSQHQQQSQQPAGGVG   G   YSNPYQTAP+VASGTPAIT+PPT           QLA+QQAQHFHH QQQQ     QMFWANQMQEIEQTTD
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPV
        FKNHSLPLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PV
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPV

Query:  VGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        VGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQQPRP MPFMPWPHTQPQQQQQ Q
Subjt:  VGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

A0A1S3C190 nuclear transcription factor Y subunit C-21.3e-11887.83Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQTTD
        MDQSERSQHQQQSQQPAGGVG   G   YSNPYQTAP+VASGTPAIT+PPT           QLA+QQAQHFHH QQQQ     QMFWANQMQEIEQTTD
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPV
        FKNHSLPLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PV
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPV

Query:  VGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        VGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQQPRP MPFMPWPHTQPQQQQQ Q
Subjt:  VGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

A0A5A7SLP2 Nuclear transcription factor Y subunit C-21.3e-11887.83Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQTTD
        MDQSERSQHQQQSQQPAGGVG   G   YSNPYQTAP+VASGTPAIT+PPT           QLA+QQAQHFHH QQQQ     QMFWANQMQEIEQTTD
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPT-----------QLAFQQAQHFHHHQQQQH----QMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPV
        FKNHSLPLARIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PV
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPV

Query:  VGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        VGSPAD+PYYYVPSQHPVGATGMIMGKQLDQAN+YGATAQQPRP MPFMPWPHTQPQQQQQ Q
Subjt:  VGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

A0A6J1HGB3 nuclear transcription factor Y subunit C-2-like1.5e-133100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
        MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIM

Query:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
        KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ
Subjt:  KADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQ

Query:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
Subjt:  HPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

A0A6J1HX86 nuclear transcription factor Y subunit C-2-like1.4e-12896.81Show/hide
Query:  MDQSERSQHQQQSQQP---AGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
        MDQSERSQHQQQSQQP   AGGVGG GGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK
Subjt:  MDQSERSQHQQQSQQP---AGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV
        KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISR DVFDFLVDIIPRDELKEEG GITKASIPVVGSPADIPYYYV
Subjt:  KIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV

Query:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ
        PSQHPVGATGMIMGKQLDQANVYGATAQQ RPPMPFMPWPHTQP+QQQQQQ
Subjt:  PSQHPVGATGMIMGKQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQQQ

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-41.2e-5857.61Show/hide
Query:  QQSQQPAGGVG-GAGGAGTYS--NPYQTAP-----LVASGTPAITVPPT--------QLAFQQAQHFH----HHQQQQHQMFWANQMQEIEQTTDFKNHS
        + S QP   +G  AGG+  Y    P  T P     + A   PA + P          QL +QQAQ FH      QQ+Q Q FWA ++ +IEQTTDFKNHS
Subjt:  QQSQQPAGGVG-GAGGAGTYS--NPYQTAP-----LVASGTPAITVPPT--------QLAFQQAQHFH----HHQQQQHQMFWANQMQEIEQTTDFKNHS

Query:  LPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA
        LPLARIKKIMKADEDVRMISAEAPV+FAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PA
Subjt:  LPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPA

Query:  D-IPY-YYVPSQHPVGATGMIMGKQLDQANVY-GATAQQPRPP
        D  PY YYVP Q   GA     G+Q     ++     QQ  PP
Subjt:  D-IPY-YYVPSQHPVGATGMIMGKQLDQANVY-GATAQQPRPP

Q8L4B2 Nuclear transcription factor Y subunit C-92.4e-5659.57Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ
              N  GA      PP P+M  P  Q Q   Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ

Q8LCG7 Nuclear transcription factor Y subunit C-25.2e-6771.01Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLA
        M+QSE  Q QQQ            G   Y  P  YQ+ P+ A+         + +AFQQA HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+LPLA
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLA

Query:  RIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADIP
        RIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP   P
Subjt:  RIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADIP

Query:  YYYVPSQ
        YYY+  Q
Subjt:  YYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-18.5e-5459.69Show/hide
Query:  QTAPLVASGTPAITVPPTQLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTL
        Q  P  A+G P      T  A      +HH    QQQQ Q+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+
Subjt:  QTAPLVASGTPAITVPPTQLAFQQAQHFHH---HQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFAKACEMFILELTL

Query:  RSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGK-QLDQANVY
        RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++G+  +D   VY
Subjt:  RSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGK-QLDQANVY

Q9ZVL3 Nuclear transcription factor Y subunit C-36.1e-5256.96Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQH-----QMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
        G   A  Y SNPYQ        T A+T  PT  +   A H  H QQQQ      Q FW  Q +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQH-----QMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPV

Query:  VFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV-PSQHPVGATGMIMGKQL
        VFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+ P   P+G  GM+MG   
Subjt:  VFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYV-PSQHPVGATGMIMGKQL

Query:  DQANVYGATAQQPRPPMPFMPWPHTQPQQQ
                 A  P P M    W    P+QQ
Subjt:  DQANVYGATAQQPRPPMPFMPWPHTQPQQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C91.7e-5759.57Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ
              N  GA      PP P+M  P  Q Q   Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ

AT1G08970.3 nuclear factor Y, subunit C91.7e-5759.57Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ
              N  GA      PP P+M  P  Q Q   Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ

AT1G08970.4 nuclear factor Y, subunit C91.7e-5759.57Show/hide
Query:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA
        G  GA  Y +NPYQT P+    T A TV      P QLAF Q       QQ  QQ Q FW NQ +EIE+TTDFKNHSLPLARIKKIMKADEDVRMISAEA
Subjt:  GAGGAGTY-SNPYQTAPLVASGTPAITV-----PPTQLAFQQAQHFHHHQQ--QQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEA

Query:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG
        PVVFA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y+P+   P+G  GM+MG
Subjt:  PVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADIPYYYVPS-QHPVGATGMIMG

Query:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ
              N  GA      PP P+M  P  Q Q   Q
Subjt:  KQLDQANVYGATAQQPRPPMPFMPWPHTQPQQQQQ

AT1G56170.1 nuclear factor Y, subunit C23.7e-6871.01Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLA
        M+QSE  Q QQQ            G   Y  P  YQ+ P+ A+         + +AFQQA HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+LPLA
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLA

Query:  RIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADIP
        RIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP   P
Subjt:  RIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADIP

Query:  YYYVPSQ
        YYY+  Q
Subjt:  YYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C23.7e-6871.01Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLA
        M+QSE  Q QQQ            G   Y  P  YQ+ P+ A+         + +AFQQA HFHHH    QQQQ QMFWANQMQEIE TTDFKNH+LPLA
Subjt:  MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNP--YQTAPLVASGTPAITVPPTQLAFQQAQHFHHH----QQQQHQMFWANQMQEIEQTTDFKNHSLPLA

Query:  RIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADIP
        RIKKIMKADEDVRMISAEAPV+FAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP   P
Subjt:  RIKKIMKADEDVRMISAEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADIP

Query:  YYYVPSQ
        YYY+  Q
Subjt:  YYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCAAACAGCTCC
GTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAATGTTTTGGG
CAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTTGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGAATGATTTCA
GCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAA
CGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAGCCTCTATTC
CTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCGAATGTGTAC
GGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATCAATCAGAGCGTTCACAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTGGGCGGTGCGGGCGGTGCAGGCACATATTCTAATCCTTACCAAACAGCTCC
GTTGGTGGCTTCCGGAACACCCGCCATTACAGTTCCCCCAACTCAGCTTGCCTTTCAGCAGGCTCAGCACTTCCACCACCACCAGCAACAACAGCACCAAATGTTTTGGG
CAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCATAGTCTCCCCCTTGCTCGAATCAAGAAGATAATGAAAGCGGATGAAGACGTTCGAATGATTTCA
GCTGAAGCACCCGTTGTATTCGCAAAGGCGTGTGAAATGTTCATCTTGGAATTGACTCTACGATCCTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAA
CGATATCGCAGCTGCAATTTCGAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGAGACGAACTGAAAGAGGAAGGCCTCGGAATCACTAAAGCCTCTATTC
CTGTAGTTGGTTCCCCAGCTGATATTCCTTATTACTATGTTCCCTCGCAGCATCCAGTTGGTGCGACGGGGATGATCATGGGGAAGCAATTGGATCAAGCGAATGTGTAC
GGTGCCACTGCTCAACAGCCACGACCACCTATGCCGTTCATGCCATGGCCGCACACTCAACCTCAGCAGCAGCAGCAGCAGCAATGA
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQPAGGVGGAGGAGTYSNPYQTAPLVASGTPAITVPPTQLAFQQAQHFHHHQQQQHQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMIS
AEAPVVFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADIPYYYVPSQHPVGATGMIMGKQLDQANVY
GATAQQPRPPMPFMPWPHTQPQQQQQQQ