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CmoCh19G003260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPlant protein of unknown function (DUF639)
Genome locationCmo_Chr19:2585126..2586787
RNA-Seq ExpressionCmoCh19G003260
SyntenyCmoCh19G003260
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006927 - Protein of unknown function DUF639


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011441.1 hypothetical protein SDJN02_26347 [Cucurbita argyrosperma subsp. argyrosperma]6.6e-2498.46Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

XP_022963792.1 uncharacterized protein LOC111463987 [Cucurbita moschata]6.6e-2498.46Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

XP_022967569.1 uncharacterized protein LOC111467032 [Cucurbita maxima]6.6e-2498.46Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

XP_023554740.1 uncharacterized protein LOC111811914 [Cucurbita pepo subsp. pepo]6.6e-2498.46Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

XP_038887911.1 uncharacterized protein LOC120077886 isoform X1 [Benincasa hispida]6.8e-2189.23Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVAL  L S+IILL+VPFKYVLS+LIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

TrEMBL top hitse value%identityAlignment
A0A5D3BB47 Uncharacterized protein2.8e-2086.15Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVAL  L S+IILL+VPF YVLS+LIFDLFTRELQFRQETVKRFMKFLRERWDSVPA+PV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

A0A6J1DS40 uncharacterized protein LOC111023786 isoform X25.6e-2187.69Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVAL  L S+IILL+VPFKYV+S+LIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

A0A6J1DTB7 uncharacterized protein LOC111023786 isoform X15.6e-2187.69Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVAL  L S+IILL+VPFKYV+S+LIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

A0A6J1HG64 uncharacterized protein LOC1114639873.2e-2498.46Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

A0A6J1HX34 uncharacterized protein LOC1114670323.2e-2498.46Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71240.1 Plant protein of unknown function (DUF639)4.9e-1764.62Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALA L  + +L++VPFKYVL+ +++D FTREL+FR+E VK+F  FLRERW+ VPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

AT1G71240.2 Plant protein of unknown function (DUF639)4.9e-1764.62Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        QITTEVALA L  + +L++VPFKYVL+ +++D FTREL+FR+E VK+F  FLRERW+ VPAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

AT3G18350.1 Plant protein of unknown function (DUF639)5.6e-0536.92Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM
        Q + + A+A + ++ ++  VP +Y+LS++  +LFTR    R+ + +R ++ LRE W S+PAAPV+
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVM

AT5G23390.1 Plant protein of unknown function (DUF639)2.5e-0539.06Show/hide
Query:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV
        Q T   A++ +  ++IL VVP KY++++   + FTRE+ +R+ +  R  + +RE W  VPAAPV
Subjt:  QITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTCCAGATAACCACTGAAGTGGCACTGGCGGCGTTGTGTTCTTCAATTATCCTCCTTGTTGTTCCTTTCAAGTATGTGCTATCTATGTTAATATTTGATCTCTT
CACACGTGAGTTACAATTTCGACAAGAAACTGTAAAGAGATTCATGAAATTCTTGAGAGAGCGTTGGGATTCTGTGCCTGCAGCCCCTGTGATGAACAAATCCTTCCGGA
TTCCTAATGGTGCACATTTTCCCAGGAAAGATCGCCGAATACCTCTTCCAATGTTCATTTCAGTGCTGCAGCCCACTATAACTTTCTTCTCGGCGTTTGAGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTCCAGATAACCACTGAAGTGGCACTGGCGGCGTTGTGTTCTTCAATTATCCTCCTTGTTGTTCCTTTCAAGTATGTGCTATCTATGTTAATATTTGATCTCTT
CACACGTGAGTTACAATTTCGACAAGAAACTGTAAAGAGATTCATGAAATTCTTGAGAGAGCGTTGGGATTCTGTGCCTGCAGCCCCTGTGATGAACAAATCCTTCCGGA
TTCCTAATGGTGCACATTTTCCCAGGAAAGATCGCCGAATACCTCTTCCAATGTTCATTTCAGTGCTGCAGCCCACTATAACTTTCTTCTCGGCGTTTGAGGTTTAGAGT
CTAGAGTTTAAGGTTCGAGGTTCAAATGTAACTTCGTGCTCAAGTCTCTGTAGCAATGACTGAATTATGAAATTCCTGTCACCATCAGAGAATTTTAAGGGTTTAAATCT
TTTTATGTTATTATGGTTTATGCTTGG
Protein sequenceShow/hide protein sequence
MPFQITTEVALAALCSSIILLVVPFKYVLSMLIFDLFTRELQFRQETVKRFMKFLRERWDSVPAAPVMNKSFRIPNGAHFPRKDRRIPLPMFISVLQPTITFFSAFEV