CuGenDBv2

Gene ID	CmoCh19G003290
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	F-box protein At1g10780-like
Genome location	Cmo_Chr19:2691946..2693902
RNA-Seq Expression	CmoCh19G003290
Synteny	CmoCh19G003290
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR032675 - Leucine-rich repeat domain superfamily IPR036047 - F-box-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571722.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-244

99.76

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQY+LSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

KAG7011446.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-244

99.76

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQY+LSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

XP_022963853.1 F-box protein At1g10780-like isoform X1 [Cucurbita moschata]

2.5e-244

100

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

XP_022963854.1 F-box protein At1g10780-like isoform X2 [Cucurbita moschata]

2.5e-244

100

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

XP_023554775.1 F-box protein At1g10780-like [Cucurbita pepo subsp. pepo]

7.2e-244

99.52

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQY+LSHMSNARDVAVCNCVSKRWKYSTPYI+SLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DL82 F-box protein At1g10780

1.5e-223

90.69

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAI QY+LSHMSNARDVAVCNCVSKRWK STPYI+SLYFPRNSFDNHSGG+SPD +IW+I+SSIVHLEELVVYSPFSGAGL+SWLS+VGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQ+S SKLEC+K AANLESLKLWGVLMTHSP+WDVF KL+NLEIVGAKL+DPALNTALR CPNLS LLLL CEGLTSVSI+LK+LE+C
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSP IQLLEVQGCSWIRA GTSSLRSLSI+NNAGRVYMV FD+LVSLESLS+RGVQWCWDAISKMLE GS+VKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSL+NVDPDFVISCLEEVSV VRSPLNAEQKM+TLESLIKYGKNL+TMVIKIL+MKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRY NRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

A0A6J1HJ43 F-box protein At1g10780-like isoform X1

1.2e-244

100

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

A0A6J1HLE6 F-box protein At1g10780-like isoform X2

1.2e-244

100

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

A0A6J1HSM0 F-box protein At1g10780-like

4.6e-244

99.52

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAIFQY+LSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNN GRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRYWNRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

A0A6J1JKP5 F-box protein At1g10780-like

3.0e-219

90.21

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAI QY+LSHM+NARDVAVCNCVSKRWK STPYIKSLYFPRNSFD+HSG  SPD+I+ RI+SSIV LEELVVYSPF+ AGLASWLSS+GPSLRRL
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNLVDLQACQDS SKLE LKSA  LESLKLWGVLMTH+PRWDVFQKL+NLEIVGAK++DPALN+ALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYGLGNCSLMINSP +QLLEVQG SWIRA GTSSL SLSI+NNAGRVYMVDFD+L SLESLSIRGVQWCWDAISKMLE GSEVKHLYMKVEFTGDFD
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        ALEPFPEIDFVEFFN+HPKLQKFDIHGAMFAALC KN +KNVDPDFVISCLEEVS+ VRSPLNAEQKMNTLESLIKYGKNLKT+VIKILRMKSSHSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        FFDEICKFRY NRKIVRIE
Subjt:  FFDEICKFRYWNRKIVRIE

SwissProt top hits

e value

%identity

Alignment

Q9SAC4 F-box protein At1g10780

3.7e-158

65.87

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Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAI QY+LS++++ARDVA CNCVSKRWK ST  +KS+ F RNSF++       D I+ ++ISS   LEELVVYSPF+ +GLASW+  V  SLR L
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNL   +   +   KL+C+  A NLE LKLWGVLM   P+WD+F  LR+LEIVGAK+DD +L+ ALRACPNLSNLLLL CEG+ S+SI+L +LE C
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYG GN  L++ S  +  L+VQGCSWIR   T  L++LSIS+  GRVYMVDF+ L SLE+LSIRGVQWCWDAI  +L+   +VKHL+MKVEFTG+ +
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK ++  F I CLEEV ++VRSPLNAEQKMNTLESL+KY + LK MVI+ILRMKS+HSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        F D+ICKFR+ N  +V IE
Subjt:  FFDEICKFRYWNRKIVRIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G10780.1 F-box/RNI-like superfamily protein

2.6e-159

65.87

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL
        MDSLPDAI QY+LS++++ARDVA CNCVSKRWK ST  +KS+ F RNSF++       D I+ ++ISS   LEELVVYSPF+ +GLASW+  V  SLR L
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRL

Query:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC
        ELRMDNL   +   +   KL+C+  A NLE LKLWGVLM   P+WD+F  LR+LEIVGAK+DD +L+ ALRACPNLSNLLLL CEG+ S+SI+L +LE C
Subjt:  ELRMDNLVDLQACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQC

Query:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD
        KLDFYG GN  L++ S  +  L+VQGCSWIR   T  L++LSIS+  GRVYMVDF+ L SLE+LSIRGVQWCWDAI  +L+   +VKHL+MKVEFTG+ +
Subjt:  KLDFYGLGNCSLMINSPNIQLLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFD

Query:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD
        AL+PFPEIDFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK ++  F I CLEEV ++VRSPLNAEQKMNTLESL+KY + LK MVI+ILRMKS+HSSADD
Subjt:  ALEPFPEIDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADD

Query:  FFDEICKFRYWNRKIVRIE
        F D+ICKFR+ N  +V IE
Subjt:  FFDEICKFRYWNRKIVRIE

AT5G56390.1 F-box/RNI-like/FBD-like domains-containing protein

2.2e-04

21.96

Show/hide

Query:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSP-------FSGAGLASWLSSV
        +  L D +   +LS + NA+DV     +SKRW+Y    + SL +  +  D   G  S      R +   + L +  V            G+G     ++ 
Subjt:  MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSP-------FSGAGLASWLSSV

Query:  GPSLRRLELRMDNLVDLQACQDSHSKLECLKSAAN--LESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKL-DDPALNTALRACPNLSNLLLLGC--EGLT
           +R+L +++D+     +  D       L S  +  L  LKL  V++        F  L+ L +   K   +  +N  + +CP L +L++  C  + +T
Subjt:  GPSLRRLELRMDNLVDLQACQDSHSKLECLKSAAN--LESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKL-DDPALNTALRACPNLSNLLLLGC--EGLT

Query:  SVSIELKHLEQCKL
         +++ +  L++  L
Subjt:  SVSIELKHLEQCKL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTCGCTCCCGGATGCTATTTTTCAGTACGTTTTGTCACATATGAGCAATGCTCGGGATGTGGCAGTCTGCAACTGTGTATCTAAGCGATGGAAATACTCAACACC
ATACATTAAAAGTCTCTATTTTCCTCGCAATTCCTTCGACAATCATTCAGGTGGGTTGAGTCCCGACATCATCATTTGGAGAATAATATCATCCATTGTTCACTTAGAGG
AGCTTGTTGTTTATAGCCCATTTTCTGGTGCTGGTCTTGCTTCATGGCTGTCTAGTGTCGGCCCTTCGCTTCGACGTCTCGAGCTAAGAATGGACAATCTGGTTGATCTT
CAGGCTTGTCAAGATAGCCATTCCAAGTTAGAATGCCTTAAATCTGCAGCAAATTTGGAGTCACTTAAATTATGGGGTGTCTTAATGACACATTCACCAAGGTGGGATGT
GTTTCAAAAGCTAAGAAACCTTGAGATTGTTGGTGCTAAGTTAGATGATCCTGCTTTGAACACGGCTCTTCGTGCATGTCCTAATCTATCCAACTTATTGCTCCTTGGCT
GTGAAGGCCTTACTTCAGTTTCAATTGAACTGAAGCATTTGGAGCAGTGTAAGCTGGATTTCTATGGCTTGGGAAACTGCTCACTCATGATCAATTCTCCTAACATTCAA
CTCCTTGAAGTTCAAGGCTGTAGCTGGATTAGAGCCTGTGGGACAAGTTCCTTGAGAAGTCTGTCAATATCCAACAATGCAGGAAGAGTTTACATGGTGGATTTTGATCA
GCTGGTTTCATTGGAGTCATTGTCCATAAGAGGAGTTCAATGGTGCTGGGATGCAATAAGCAAAATGCTTGAATTAGGGAGTGAGGTGAAGCATCTTTACATGAAAGTTG
AGTTCACCGGAGACTTTGATGCACTTGAACCTTTCCCAGAGATTGACTTTGTTGAGTTTTTCAATAACCATCCAAAGTTGCAAAAGTTTGACATTCATGGAGCCATGTTT
GCTGCTCTTTGCCAGAAGAACAGCCTTAAAAATGTGGATCCAGATTTTGTAATCTCGTGTTTGGAGGAAGTATCGGTTTCGGTTAGATCGCCGTTGAATGCCGAACAGAA
GATGAATACTCTCGAATCGTTGATAAAGTATGGCAAGAATTTGAAGACCATGGTAATAAAAATTCTTCGAATGAAGAGTAGCCATAGCAGTGCAGATGATTTCTTTGATG
AGATTTGCAAGTTTAGATATTGGAATCGCAAGATCGTTCGTATCGAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDSLPDAIFQYVLSHMSNARDVAVCNCVSKRWKYSTPYIKSLYFPRNSFDNHSGGLSPDIIIWRIISSIVHLEELVVYSPFSGAGLASWLSSVGPSLRRLELRMDNLVDL
QACQDSHSKLECLKSAANLESLKLWGVLMTHSPRWDVFQKLRNLEIVGAKLDDPALNTALRACPNLSNLLLLGCEGLTSVSIELKHLEQCKLDFYGLGNCSLMINSPNIQ
LLEVQGCSWIRACGTSSLRSLSISNNAGRVYMVDFDQLVSLESLSIRGVQWCWDAISKMLELGSEVKHLYMKVEFTGDFDALEPFPEIDFVEFFNNHPKLQKFDIHGAMF
AALCQKNSLKNVDPDFVISCLEEVSVSVRSPLNAEQKMNTLESLIKYGKNLKTMVIKILRMKSSHSSADDFFDEICKFRYWNRKIVRIE

CmoCh19G003290 (gene) of Cucurbita moschata (Rifu) v1 genome