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CmoCh19G003340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationCmo_Chr19:2810054..2814563
RNA-Seq ExpressionCmoCh19G003340
SyntenyCmoCh19G003340
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsIPR033205 - COP9 signalosome, subunit CSN8
IPR033464 - CSN8/PSMD8/EIF3K


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571729.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]3.8e-5680Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDFARLTEALAFKSYEKIADICDDLMLQ                         AAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPST+KE+RPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQG+LVAFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

XP_022963990.1 COP9 signalosome complex subunit 8-like [Cucurbita moschata]2.6e-5782.14Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDFARLTEALAFKSYEKIADICDDLMLQ                         AAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

XP_022967528.1 COP9 signalosome complex subunit 8-like [Cucurbita maxima]3.2e-5579.29Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDFARLTEALAFKSYEKIADICD+LMLQ                         AAAEGVDYQDEWPYVIHFLG+LYVDDINSARF WKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKIAQ+LWIQDHRGVYEAIHGFDWCQEVQGILVAFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

XP_023553641.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]4.4e-5781.43Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDFARLTEALAFKSYEKIADICDDLMLQ                         AAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQG+LVAFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

XP_031743776.1 COP9 signalosome complex subunit 8 isoform X2 [Cucumis sativus]5.8e-4970Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDF RLTEALA KSY+KIADICDDLMLQ                         AAAEG+ Y+DEWPY IHFLGY YVDDINSARF WKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVA+WKI QKLW++DHRGVYEAIH  DWCQEVQG+L AFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

TrEMBL top hitse value%identityAlignment
A0A0A0KJG9 CSN8_PSD8_EIF3K domain-containing protein1.5e-5069.93Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDF RLTEALA KSY+KIADICDDLMLQ                         AAAEG+ Y+DEWPY IHFLGY YVDDINSARF WKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFSGNS
        LVA+WKI QKLW++DHRGVYEAIH  DWCQEVQG+L AFSG S
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFSGNS

A0A1S3BMN0 COP9 signalosome complex subunit 8 isoform X11.4e-4870Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDF RLTEALA KSY+KIADICDDLMLQ                         AAAEG+ Y+DEWPY IHFLGY YVDDINSARF WK+IPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKI QKLW +DHRGVYEAIH  DWCQEVQG+L AFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

A0A1S3BMY1 COP9 signalosome complex subunit 8 isoform X21.4e-4870Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDF RLTEALA KSY+KIADICDDLMLQ                         AAAEG+ Y+DEWPY IHFLGY YVDDINSARF WK+IPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKI QKLW +DHRGVYEAIH  DWCQEVQG+L AFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

A0A6J1HJJ3 COP9 signalosome complex subunit 8-like1.3e-5782.14Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDFARLTEALAFKSYEKIADICDDLMLQ                         AAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

A0A6J1HVB2 COP9 signalosome complex subunit 8-like1.5e-5579.29Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MDFARLTEALAFKSYEKIADICD+LMLQ                         AAAEGVDYQDEWPYVIHFLG+LYVDDINSARF WKSIPSTIKENRPE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        LVAVWKIAQ+LWIQDHRGVYEAIHGFDWCQEVQGILVAFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 82.0e-3651.43Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MD + + EALA KS++KIADICD LMLQ                          A+EG++Y D+WPY IH LGY YVDD +SARF WK IP+ IKE +PE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        +VA W I QKLW  D+ GVYEAI G+DW QE + ++ AFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS

Q6GQA6 COP9 signalosome complex subunit 83.5e-1239.44Show/hide
Query:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFSGNSQ
        YL  +D+N+AR+ WK IPS IK +  EL  +W++ QK+W +D  G+Y +I  + W + +Q I+ A    +Q
Subjt:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFSGNSQ

Q6P4Z9 COP9 signalosome complex subunit 84.2e-1040Show/hide
Query:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVA
        YL  +D+N+AR+ WK IP  IK    EL  +W + Q++W +D  G+Y  I+   W + VQ I+ A
Subjt:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVA

Q7ZUZ0 COP9 signalosome complex subunit 83.8e-1138.46Show/hide
Query:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVA
        YL  +D+N+AR+ WK IP  IK   PE+ A+W + Q++W +D  G+Y AI  + W + +  ++ A
Subjt:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVA

Q8VBV7 COP9 signalosome complex subunit 84.2e-1040Show/hide
Query:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVA
        YL  +D+N+AR+ WK IP  IK    EL  +W + Q++W +D  G+Y  I+   W + VQ I+ A
Subjt:  YLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVA

Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN81.4e-3751.43Show/hide
Query:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE
        MD + + EALA KS++KIADICD LMLQ                          A+EG++Y D+WPY IH LGY YVDD +SARF WK IP+ IKE +PE
Subjt:  MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPE

Query:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS
        +VA W I QKLW  D+ GVYEAI G+DW QE + ++ AFS
Subjt:  LVAVWKIAQKLWIQDHRGVYEAIHGFDWCQEVQGILVAFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCAACTGAATTTCTCACTTTTTCATT
TTCTTCACCTTTAATTTCTTCCCCTCACCTCATTTTTCCTCTCCGGTTTGCTGCAGCCGAGGGCGTTGATTATCAGGATGAATGGCCTTACGTGATCCATTTTCTTGGCT
ACCTTTACGTCGATGACATCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATAAAAGAAAACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAG
CTATGGATTCAGGACCATAGGGGCGTGTACGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCATATTAGTTGCATTTTCAGGCAATTCTCAGAGTATCTT
AGGTGTTTCAGTTCTGAGAGTATCTCAGCTTTTGGAGGTCGCTCTTAATTGGTTATTTGTAGCTGTTGGAGCTGTTAAGGATGTTATGTCTATTCAATGCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGCTCGTCTCACTGAGGCTTTGGCTTTCAAATCTTACGAAAAGATCGCTGATATTTGCGACGACCTAATGCTCCAGGCAACTGAATTTCTCACTTTTTCATT
TTCTTCACCTTTAATTTCTTCCCCTCACCTCATTTTTCCTCTCCGGTTTGCTGCAGCCGAGGGCGTTGATTATCAGGATGAATGGCCTTACGTGATCCATTTTCTTGGCT
ACCTTTACGTCGATGACATCAATAGTGCTCGATTTTTCTGGAAATCAATACCTTCCACTATAAAAGAAAACCGACCAGAACTGGTTGCCGTTTGGAAAATTGCCCAAAAG
CTATGGATTCAGGACCATAGGGGCGTGTACGAGGCTATTCATGGATTTGATTGGTGTCAAGAAGTTCAGGGCATATTAGTTGCATTTTCAGGCAATTCTCAGAGTATCTT
AGGTGTTTCAGTTCTGAGAGTATCTCAGCTTTTGGAGGTCGCTCTTAATTGGTTATTTGTAGCTGTTGGAGCTGTTAAGGATGTTATGTCTATTCAATGCCTATAA
Protein sequenceShow/hide protein sequence
MDFARLTEALAFKSYEKIADICDDLMLQATEFLTFSFSSPLISSPHLIFPLRFAAAEGVDYQDEWPYVIHFLGYLYVDDINSARFFWKSIPSTIKENRPELVAVWKIAQK
LWIQDHRGVYEAIHGFDWCQEVQGILVAFSGNSQSILGVSVLRVSQLLEVALNWLFVAVGAVKDVMSIQCL