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CmoCh19G003350 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003350
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCOP9 signalosome complex subunit 8-like
Genome locationCmo_Chr19:2814658..2818444
RNA-Seq ExpressionCmoCh19G003350
SyntenyCmoCh19G003350
Gene Ontology termsGO:0000338 - protein deneddylation (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0009753 - response to jasmonic acid (biological process)
GO:0010387 - COP9 signalosome assembly (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008180 - COP9 signalosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571729.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0997.44Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
KAG7011450.1 COP9 signalosome complex subunit 8, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0997.44Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
XP_022963990.1 COP9 signalosome complex subunit 8-like [Cucurbita moschata]1.7e-10100Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
XP_022967528.1 COP9 signalosome complex subunit 8-like [Cucurbita maxima]1.4e-0997.44Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
XP_023553641.1 COP9 signalosome complex subunit 8-like [Cucurbita pepo subsp. pepo]1.4e-0997.44Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
TrEMBL top hitse value%identityAlignment
A0A6J1DU53 COP9 signalosome complex subunit 81.6e-0682.05Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT  GWIVD+AS+MLTVKKQ+I  EQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
A0A6J1EJA8 COP9 signalosome complex subunit 8-like7.1e-0782.05Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT +GWIVDVAS+M TVKKQ+I  EQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
A0A6J1HJJ3 COP9 signalosome complex subunit 8-like8.1e-11100Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
A0A6J1HVB2 COP9 signalosome complex subunit 8-like6.8e-1097.44Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT RGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
A0A6J1JQ49 COP9 signalosome complex subunit 8-like9.2e-0782.05Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        VT +GWIVDVAS+M TVKKQ+I  EQKLDSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
SwissProt top hitse value%identityAlignment
P43255 COP9 signalosome complex subunit 88.9e-0769.23Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        V   GW VD AS+M +VKKQ + REQK+DSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
Arabidopsis top hitse value%identityAlignment
AT4G14110.1 COP9 signalosome, subunit CSN86.3e-0869.23Show/hide
Query:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY
        V   GW VD AS+M +VKKQ + REQK+DSSKLQRLTEY
Subjt:  VTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTACAATCAAGAGTAGTAGAGAAAATTGTCACCAAGTACATAGCATGCACCACTGCTACCCCACCACTCGGGAGACAGACCATTTTGCTTTTGATTTGGGGAGA
AACTCAGCTGCTACCGATCGGGGCGGATGTAACAGGGCGAGGATGGATTGTTGATGTTGCTTCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGT
TAGATTCCAGTAAATTGCAGCGCTTGACCGAATATAAAACGAACGATGGAGAAGAAGCTTATAGGTCATTGAGTCAGTACGAGATGGGATGGTATGAAGATTTAACGGAA
TATCTACAAACCGAGTACGTGACGATGGGGTATCGATCACTTGCAGCACCCAATACAATCGTGTACTTGTGCCAAATACATGGACCGGCTACGACACCGAGCGTACATCC
TTTTGTATTCGTTATTCAACAACTCCGATTCGGATGCTACGACAGACATGGAATAAGAACGAGATCTGCTCTCGCCTCGCTTAATACTTCTCAATTTCGACTCCTCCATC
CTGTGTTGAACGACGCAATAGCACATCGAGCCAATTGTTGTAAGCATTATTGTGCTACCGATCACGGTTGCACTAATGGCAAGCCACTTGTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTACAATCAAGAGTAGTAGAGAAAATTGTCACCAAGTACATAGCATGCACCACTGCTACCCCACCACTCGGGAGACAGACCATTTTGCTTTTGATTTGGGGAGA
AACTCAGCTGCTACCGATCGGGGCGGATGTAACAGGGCGAGGATGGATTGTTGATGTTGCTTCTGAAATGTTGACTGTGAAGAAACAAGAAATTGGGAGAGAGCAGAAGT
TAGATTCCAGTAAATTGCAGCGCTTGACCGAATATAAAACGAACGATGGAGAAGAAGCTTATAGGTCATTGAGTCAGTACGAGATGGGATGGTATGAAGATTTAACGGAA
TATCTACAAACCGAGTACGTGACGATGGGGTATCGATCACTTGCAGCACCCAATACAATCGTGTACTTGTGCCAAATACATGGACCGGCTACGACACCGAGCGTACATCC
TTTTGTATTCGTTATTCAACAACTCCGATTCGGATGCTACGACAGACATGGAATAAGAACGAGATCTGCTCTCGCCTCGCTTAATACTTCTCAATTTCGACTCCTCCATC
CTGTGTTGAACGACGCAATAGCACATCGAGCCAATTGTTGTAAGCATTATTGTGCTACCGATCACGGTTGCACTAATGGCAAGCCACTTGTGGTTTGA
Protein sequenceShow/hide protein sequence
MMLQSRVVEKIVTKYIACTTATPPLGRQTILLLIWGETQLLPIGADVTGRGWIVDVASEMLTVKKQEIGREQKLDSSKLQRLTEYKTNDGEEAYRSLSQYEMGWYEDLTE
YLQTEYVTMGYRSLAAPNTIVYLCQIHGPATTPSVHPFVFVIQQLRFGCYDRHGIRTRSALASLNTSQFRLLHPVLNDAIAHRANCCKHYCATDHGCTNGKPLVV