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CmoCh19G003400 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003400
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCyclopropane-fatty-acyl-phospholipid synthase
Genome locationCmo_Chr19:2857355..2859405
RNA-Seq ExpressionCmoCh19G003400
SyntenyCmoCh19G003400
Gene Ontology termsGO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR026669 - Arsenite methyltransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3591713.1 hypothetical protein DY000_02022856, partial [Brassica cretica]5.0e-2443.64Show/hide
Query:  VLSLIEKGTRLFITRFLVVEKKKIKYN--------------------LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDD------RSSWHEFI
        VLSL E G RLF+TR  ++E+    +N                     + ++  + DLGLA AYING+FS +D++ GLLN +++         +  HEF+
Subjt:  VLSLIEKGTRLFITRFLVVEKKKIKYN--------------------LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDD------RSSWHEFI

Query:  EDFFGCCESVLEENGLL---FILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
        E FF  CE+ L ENGL+   FI +P+E   E+RLSS FIKEYIFPG C+P L+R+T+AM+S+SRL
Subjt:  EDFFGCCESVLEENGLL---FILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

KAG7011453.1 ufaA1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-2033.7Show/hide
Query:  VLSLIEKGTRLFITRFL------------------------VVEKKKIKYN---LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL----------
        + SL  KG RLF+TRFL                         ++K  +K +    + ++  + DLGLA AYINGEFSLMDKEEGLLNLIL          
Subjt:  VLSLIEKGTRLFITRFL------------------------VVEKKKIKYN---LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL----------

Query:  --------------------------------------------RDDRS-----------------------------SW--------------------
                                                    R+D                                W                    
Subjt:  --------------------------------------------RDDRS-----------------------------SW--------------------

Query:  -------HEFIEDFFGCCESVLEENGLL---FILVPD---EEHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
               HEF+EDFFG CESVL++NGLL   FI VPD   EE+RLS+GFIKEYIF G C+P LSRITTAM SASRL
Subjt:  -------HEFIEDFFGCCESVLEENGLL---FILVPD---EEHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

RID53175.1 hypothetical protein BRARA_G00593 [Brassica rapa]8.2e-1937.11Show/hide
Query:  SLIEKGTRLFITRFL-------------------VVEKKKIKYNL-----------FLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDRSSW--
        S+ EKG R   TRFL                     +   ++ NL           + ++  + DLGLA AYING+FS  DK+ GLLNLI+  DR ++  
Subjt:  SLIEKGTRLFITRFL-------------------VVEKKKIKYNL-----------FLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDRSSW--

Query:  -------------------------HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
                                 HEF++ FF  CE+ L E+G   L FI +P+E   E+RL+S FIKEYIFPG C+P L+R+ +AMAS+SRL
Subjt:  -------------------------HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

XP_022974371.1 uncharacterized protein LOC111473008 isoform X1 [Cucurbita maxima]3.1e-1851.15Show/hide
Query:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL
        + + K+++KY      +   DLGL     + EF L D  E  L+   + DR        +  HEF+EDFFG CESVLE+NGLL   FI +PDE   E+RL
Subjt:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL

Query:  SSGFIKEYIFPGECVPLLSRITTAMASASRL
        S+GFIKEYIF G C+P LSRITTAMASASRL
Subjt:  SSGFIKEYIFPGECVPLLSRITTAMASASRL

XP_023521277.1 uncharacterized protein LOC111785027 [Cucurbita pepo subsp. pepo]2.4e-1851.91Show/hide
Query:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPD---EEHRL
        + + K+++KY      +   DLGL     + EF L D  E  L+   + DR        +  HEF+EDFFG CESVLE+NGLL   FI VPD   EE+RL
Subjt:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPD---EEHRL

Query:  SSGFIKEYIFPGECVPLLSRITTAMASASRL
        S+GFIKEYIF G C+P LSRITTAMASASRL
Subjt:  SSGFIKEYIFPGECVPLLSRITTAMASASRL

TrEMBL top hitse value%identityAlignment
A0A397YI84 Amino_oxidase domain-containing protein4.0e-1937.11Show/hide
Query:  SLIEKGTRLFITRFL-------------------VVEKKKIKYNL-----------FLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDRSSW--
        S+ EKG R   TRFL                     +   ++ NL           + ++  + DLGLA AYING+FS  DK+ GLLNLI+  DR ++  
Subjt:  SLIEKGTRLFITRFL-------------------VVEKKKIKYNL-----------FLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDRSSW--

Query:  -------------------------HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
                                 HEF++ FF  CE+ L E+G   L FI +P+E   E+RL+S FIKEYIFPG C+P L+R+ +AMAS+SRL
Subjt:  -------------------------HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

A0A6J1IA38 uncharacterized protein LOC111473008 isoform X21.5e-1851.15Show/hide
Query:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL
        + + K+++KY      +   DLGL     + EF L D  E  L+   + DR        +  HEF+EDFFG CESVLE+NGLL   FI +PDE   E+RL
Subjt:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL

Query:  SSGFIKEYIFPGECVPLLSRITTAMASASRL
        S+GFIKEYIF G C+P LSRITTAMASASRL
Subjt:  SSGFIKEYIFPGECVPLLSRITTAMASASRL

A0A6J1IB60 uncharacterized protein LOC111473008 isoform X11.5e-1851.15Show/hide
Query:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL
        + + K+++KY      +   DLGL     + EF L D  E  L+   + DR        +  HEF+EDFFG CESVLE+NGLL   FI +PDE   E+RL
Subjt:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL

Query:  SSGFIKEYIFPGECVPLLSRITTAMASASRL
        S+GFIKEYIF G C+P LSRITTAMASASRL
Subjt:  SSGFIKEYIFPGECVPLLSRITTAMASASRL

A0A6J1ICH0 uncharacterized protein LOC111472470 isoform X21.5e-1851.15Show/hide
Query:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL
        + + K+++KY      +   DLGL     + EF L D  E  L+   + DR        +  HEF+EDFFG CESVLE+NGLL   FI +PDE   E+RL
Subjt:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL

Query:  SSGFIKEYIFPGECVPLLSRITTAMASASRL
        S+GFIKEYIF G C+P LSRITTAMASASRL
Subjt:  SSGFIKEYIFPGECVPLLSRITTAMASASRL

A0A6J1IFX4 uncharacterized protein LOC111472470 isoform X11.5e-1851.15Show/hide
Query:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL
        + + K+++KY      +   DLGL     + EF L D  E  L+   + DR        +  HEF+EDFFG CESVLE+NGLL   FI +PDE   E+RL
Subjt:  LVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDR--------SSWHEFIEDFFGCCESVLEENGLL---FILVPDE---EHRL

Query:  SSGFIKEYIFPGECVPLLSRITTAMASASRL
        S+GFIKEYIF G C+P LSRITTAMASASRL
Subjt:  SSGFIKEYIFPGECVPLLSRITTAMASASRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G23470.1 Cyclopropane-fatty-acyl-phospholipid synthase1.1e-1657.97Show/hide
Query:  HEFIEDFFGCCESVLEENG---LLFILVPD---EEHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
        HEF++ FF CCE  L ENG   L F  +P+   +E RL+SGFI EYIFPG C+P L+R+T+AMAS+SRL
Subjt:  HEFIEDFFGCCESVLEENG---LLFILVPD---EEHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

AT3G23470.1 Cyclopropane-fatty-acyl-phospholipid synthase4.5e-0735.92Show/hide
Query:  VLSLIEKGTRLFITRFL----------VVEKKKIKY--------------------NLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL-----RD
        VLSL E G RLF+TRFL          ++E+    +                      + ++  + DLGLA AYI+G+FS +DK+ GLLNLI+     RD
Subjt:  VLSLIEKGTRLFITRFL----------VVEKKKIKY--------------------NLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL-----RD

Query:  DRS
         RS
Subjt:  DRS

AT3G23480.1 Cyclopropane-fatty-acyl-phospholipid synthase4.5e-1556.52Show/hide
Query:  HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
        H+F+E FF  CE+ L E+G   L F  +P+E   E RL+SGFI EYIFPG C+P L+R+T+AMAS+SRL
Subjt:  HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

AT3G23480.1 Cyclopropane-fatty-acyl-phospholipid synthase8.5e-0636.96Show/hide
Query:  VLSLIEKGTRLFITRFL----------VVE----------------KKKIKYN---LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL
        V SL E G RLF+TRF           ++E                K  +K +    + ++    DLGLA AYING+FS +DK+ GLLNLI+
Subjt:  VLSLIEKGTRLFITRFL----------VVE----------------KKKIKYN---LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL

AT3G23480.2 Cyclopropane-fatty-acyl-phospholipid synthase4.5e-1556.52Show/hide
Query:  HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
        H+F+E FF  CE+ L E+G   L F  +P+E   E RL+SGFI EYIFPG C+P L+R+T+AMAS+SRL
Subjt:  HEFIEDFFGCCESVLEENG---LLFILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

AT3G23480.2 Cyclopropane-fatty-acyl-phospholipid synthase8.5e-0636.96Show/hide
Query:  VLSLIEKGTRLFITRFL----------VVE----------------KKKIKYN---LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL
        V SL E G RLF+TRF           ++E                K  +K +    + ++    DLGLA AYING+FS +DK+ GLLNLI+
Subjt:  VLSLIEKGTRLFITRFL----------VVE----------------KKKIKYN---LFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL

AT3G23510.1 Cyclopropane-fatty-acyl-phospholipid synthase3.1e-1659.42Show/hide
Query:  HEFIEDFFGCCESVLEENGLL---FILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
        HEF+E FF  CE+ L E+GL+   FI  P+E   E+RLSS FIKEYIFPG CVP L+++T+AM+S+SRL
Subjt:  HEFIEDFFGCCESVLEENGLL---FILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

AT3G23510.1 Cyclopropane-fatty-acyl-phospholipid synthase1.0e-0635.58Show/hide
Query:  VLSLIEKGTRLFITRFL----------VVEKKKIKY--------------------NLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL-----RD
        V SL E G RLF+TRFL          ++E+    +                      + ++  + DLGLA AYING+FS +DKE GLLNLI+     RD
Subjt:  VLSLIEKGTRLFITRFL----------VVEKKKIKY--------------------NLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL-----RD

Query:  DRSS
         +S+
Subjt:  DRSS

AT3G23530.1 Cyclopropane-fatty-acyl-phospholipid synthase1.7e-1762.32Show/hide
Query:  HEFIEDFFGCCESVLEENGLL---FILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL
        HEF+E FF  CE+ L ENGL+   FI +P+E   E+RLSS FIKEYIFPG C+P L+R+TTAM+S+SRL
Subjt:  HEFIEDFFGCCESVLEENGLL---FILVPDE---EHRLSSGFIKEYIFPGECVPLLSRITTAMASASRL

AT3G23530.1 Cyclopropane-fatty-acyl-phospholipid synthase1.0e-0635.58Show/hide
Query:  VLSLIEKGTRLFITRFL----------VVEKKKIKY--------------------NLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL-----RD
        V SL E G RLF+TRFL          ++E+    +                      + ++  + DLGLA AYING+FS +DKE GLLNLI+     RD
Subjt:  VLSLIEKGTRLFITRFL----------VVEKKKIKY--------------------NLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLIL-----RD

Query:  DRSS
         +S+
Subjt:  DRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCACGTAATGTTTTGTCTCTAATAGAAAAAGGAACACGCCTTTTTATTACAAGATTTCTTGTTGTTGAAAAAAAAAAGATAAAATATAATTTATTTTTACGATT
ACGAGAGAAGCTAGACTTGGGGCTTGCAGGTGCATATATCAATGGAGAATTTTCATTAATGGATAAAGAAGAGGGTCTTCTTAACCTTATTTTGCGAGATGATAGAAGCA
GTTGGCACGAATTCATAGAAGATTTCTTTGGTTGTTGTGAATCAGTGTTAGAGGAAAATGGTCTTCTTTTCATATTAGTGCCAGACGAGGAGCATCGGCTAAGTTCTGGT
TTTATAAAAGAATATATATTTCCAGGAGAGTGCGTACCGTTATTAAGTAGAATAACAACGGCCATGGCTAGTGCATCAAGGCTTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCACGTAATGTTTTGTCTCTAATAGAAAAAGGAACACGCCTTTTTATTACAAGATTTCTTGTTGTTGAAAAAAAAAAGATAAAATATAATTTATTTTTACGATT
ACGAGAGAAGCTAGACTTGGGGCTTGCAGGTGCATATATCAATGGAGAATTTTCATTAATGGATAAAGAAGAGGGTCTTCTTAACCTTATTTTGCGAGATGATAGAAGCA
GTTGGCACGAATTCATAGAAGATTTCTTTGGTTGTTGTGAATCAGTGTTAGAGGAAAATGGTCTTCTTTTCATATTAGTGCCAGACGAGGAGCATCGGCTAAGTTCTGGT
TTTATAAAAGAATATATATTTCCAGGAGAGTGCGTACCGTTATTAAGTAGAATAACAACGGCCATGGCTAGTGCATCAAGGCTTTGGTAA
Protein sequenceShow/hide protein sequence
MQARNVLSLIEKGTRLFITRFLVVEKKKIKYNLFLRLREKLDLGLAGAYINGEFSLMDKEEGLLNLILRDDRSSWHEFIEDFFGCCESVLEENGLLFILVPDEEHRLSSG
FIKEYIFPGECVPLLSRITTAMASASRLW