; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G003550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationCmo_Chr19:3065427..3066518
RNA-Seq ExpressionCmoCh19G003550
SyntenyCmoCh19G003550
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571735.1 Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.0e-20699.17Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKSAMEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGR RDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

KAG7011461.1 Protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-20498.89Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKSAMEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGR RDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQ+
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV

XP_022932961.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]7.2e-208100Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

XP_022973877.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita maxima]2.2e-20498.07Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIE+YSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKS+MEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGR RDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLH+DRFLSLCGRRDK+CNSPQVRF
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

XP_023511734.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]4.0e-20699.17Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        +RHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGR RDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

TrEMBL top hitse value%identityAlignment
A0A0A0LVT2 PORR domain-containing protein9.6e-18289.78Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKI
        MRHKSSGGMRPKRKIYYRV ELDKVM+LQKKPSLILKLINIIQSQK+KFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS R  PYVRL+NKAE I
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKI

Query:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE
        ASEE KVKSAMEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIP+YPEFFSVKEVDGKAHLHLENWDSSLAI ARE+ F + RD+SSC 
Subjt:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE

Query:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL
          KRVRISKDGNFSGPFAFKMCFP GFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RKRVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKL
Subjt:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL

Query:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV
        LLCL+KHQGIFYITNKGARSTV LKE YEGS+L DKCPLLLH DRFLSLCGRRD +CNS QV
Subjt:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV

A0A1S3CE49 protein ROOT PRIMORDIUM DEFECTIVE 11.1e-18289.5Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKI
        MRHKSSGGMRPKRKIYYRV ELDKVM+LQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS R  PYVRL+NKAE I
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKI

Query:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE
        ASEE KVKSAMEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIP+YPEFFSVKE DGKAHL+LENWDSSLA+ ARE+GFG+ RD+SSC 
Subjt:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE

Query:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL
        + KRVRISKDGNF GPFAFKMCFPPGFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RKRVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKL
Subjt:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL

Query:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV
        LLCL+KHQGIFYITNKGARSTV LKE YEGS L DKCPLLLH DRFLSLCGRRD +CN+ QV
Subjt:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV

A0A5A7T281 Protein ROOT PRIMORDIUM DEFECTIVE 11.1e-18289.5Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKI
        MRHKSSGGMRPKRKIYYRV ELDKVM+LQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIEKYSSIFYV SGS R  PYVRL+NKAE I
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCR-RPYVRLTNKAEKI

Query:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE
        ASEE KVKSAMEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIP+YPEFFSVKE DGKAHL+LENWDSSLA+ ARE+GFG+ RD+SSC 
Subjt:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE

Query:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL
        + KRVRISKDGNF GPFAFKMCFPPGFRPN SYLEHLERWQKMDFPSPYLNARRFD ADPK RKRVVAVLHEFLSLTMEKRM STQLDAFHREFLLPSKL
Subjt:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL

Query:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV
        LLCL+KHQGIFYITNKGARSTV LKE YEGS L DKCPLLLH DRFLSLCGRRD +CN+ QV
Subjt:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQV

A0A6J1F3A5 protein WHAT'S THIS FACTOR 1 homolog3.5e-208100Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

A0A6J1I8Q3 protein WHAT'S THIS FACTOR 1 homolog1.1e-20498.07Show/hide
Query:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA
        MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFI LRDLEKEVGFVQKWNFMAVIE+YSSIFYVDSGSCRRPYVRLTNKAEKIA
Subjt:  MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIA

Query:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        SEEHKVKS+MEPI+VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGR RDVSSCEN
Subjt:  SEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
        RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLL

Query:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF
        LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLH+DRFLSLCGRRDK+CNSPQVRF
Subjt:  LCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic3.8e-4231.5Show/hide
Query:  MRPKRKIYYRVDEL--DKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK---EVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEE
        + P R    R  EL  D V++  KK  L+L +  I+ SQ  + +SLR L K   ++G  ++  F+A++ KY  +F +          ++T++AE++  +E
Subjt:  MRPKRKIYYRVDEL--DKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK---EVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEE

Query:  HKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKR
         ++++ +E ++V  LRKL+M+S+D R+ LE I  + ++LGLP +F+ ++   YP++F V        L L +WD  LA+SA E        +S  +NR R
Subjt:  HKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKR

Query:  VRISKDGNFSGPFAF-KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLC
            ++     P  F ++  P G   + S    + +++ M + SPY +     +   +  K    V+HE LSLT EKR     L  F  EF    +L   
Subjt:  VRISKDGNFSGPFAF-KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLC

Query:  LLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL
        L++H  +FY++ KG R +V L+EAY  S L DK PL L  ++  +L
Subjt:  LLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL

B6TTV8 Protein WHAT'S THIS FACTOR 1, chloroplastic2.3e-3930.61Show/hide
Query:  DKVMELQKKPSLILKLINIIQSQKHKFISLRDL---EKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLR
        D V++  KK  L+LKL NI+ +Q  + +SLR+L    +++G  +K   +A++ ++  +F V          RLT  AE++  +E ++++  E + V  LR
Subjt:  DKVMELQKKPSLILKLINIIQSQKHKFISLRDL---EKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLR

Query:  KLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKDGNFSGPFAF-
        KLLM+S + R+ +E +  +  +LGLP +F+ ++   YP++F V  +D    L L +WD  LA+SA E        ++  E+R R    ++     P  F 
Subjt:  KLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKDGNFSGPFAF-

Query:  KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGAR
        ++  P G +        + R+++M + SPY +     +   +  K    V+HE LSLT+EKR     L  F  EF     L   +++H  +FY++ KG R
Subjt:  KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGAR

Query:  STVLLKEAYEGSVLSDKCPLLLHYDRFLSL
         +V L+EAY+ S L +K  L+L  ++  +L
Subjt:  STVLLKEAYEGSVLSDKCPLLLHYDRFLSL

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic2.9e-4232.42Show/hide
Query:  DKVMELQKKPSLILKLINIIQSQKHKFISLRDL---EKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLR
        D V++  KK  L+LKL NI+ S   + +SLRDL    +++G  +K   +A+++++  +F V          RLT  AE++  +E  +K+  E + V  LR
Subjt:  DKVMELQKKPSLILKLINIIQSQKHKFISLRDL---EKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIVVKNLR

Query:  KLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKDGNFSGPFAF-
        KLLM+S D R+ +E I  + ++LGLP +F+ ++   YP++F V ++D    L L +WD  LA+SA E        V+  ENR R    ++     P  F 
Subjt:  KLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKDGNFSGPFAF-

Query:  KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGAR
        ++  P G + +      + ++++M + SPY +     +   +  K    V+HE LSLT+EKR     L  F  EF     L   L++H  +FY++ KG R
Subjt:  KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNKGAR

Query:  STVLLKEAYEGSVLSDKCPLLLHYDRFLSL
         +V L+EAY+ S L +K  L+L  ++  +L
Subjt:  STVLLKEAYEGSVLSDKCPLLLHYDRFLSL

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 12.3e-3132.11Show/hide
Query:  PKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK-----EVGFVQKWNFMAVIEKYSSIFYVDSGSCRR-PYVRLTNKAEKIASEEH
        PK++   R    D  ME++KK   ++K  ++I SQ +  I++  L+       +GF Q     A + K+  +F +     +R  Y RLT KA      EH
Subjt:  PKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK-----EVGFVQKWNFMAVIEKYSSIFYVDSGSCRR-PYVRLTNKAEKIASEEH

Query:  KVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----AHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        +      P  V  LRKL+M+S   R+ LE++    +E GLP DF+ S+I ++P+FF +  +DG+     ++ +   D +L+I A E        V   E 
Subjt:  KVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----AHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP
        R +   ++D  FS    F + FPPGF+    +   + +WQ++ + SPY +   +D     A  +  KR VA +HE LSLT+EK++   ++  F     LP
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP

Query:  SKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL
         KL   LL+HQGIFYI+   N G   TV L+E Y+   L +   + L   R   L
Subjt:  SKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial2.0e-1424.07Show/hide
Query:  MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEV-GFVQKWNFMAVIEKYSSIFYVDSG-SCRRPYVRLTNKAEKIASEEHKV
        M+ KR  Y+  D ++ ++   +  S ++ L N I  + ++ I +  + K+   F         + K+ SIF    G     P+ RLT +A ++  +E  V
Subjt:  MRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEV-GFVQKWNFMAVIEKYSSIFYVDSG-SCRRPYVRLTNKAEKIASEEHKV

Query:  KSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEG-------FGRGRDVSSCE
               +   L+KL+++S D  +PL  ++ +   LGLP D+      ++P+                N DSS      E+G       +  G  V S  
Subjt:  KSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEG-------FGRGRDVSSCE

Query:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL
         +  ++  +         F +    G R  +   + L  +QK+ + SPY +    D +   A KRVV  LHE L L +E      +L    + F LP K+
Subjt:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL

Query:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL
             +H  IFY++ K    T +L+E Y      +  P+L    +++ L
Subjt:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL

Arabidopsis top hitse value%identityAlignment
AT1G79120.1 Ubiquitin carboxyl-terminal hydrolase family protein5.8e-13967.97Show/hide
Query:  MRHKS-SGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKI
        +RHKS  GG RPK+K+Y+RV +LDK ++L KKPSLIL+L +IIQ+QKH  + LRDLEK VGFV KWN MA IEKY +IFYV  G    P+V LT KA+KI
Subjt:  MRHKS-SGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKI

Query:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE
        A+EE +   +MEPI+V NLRKLLM+SVDCRVPLE +EFI S +GLP DFK++LIP+Y EFFS+K ++GK +L LENWDSSLAI+ARE+   R     S  
Subjt:  ASEEHKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCE

Query:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL
        +RKRVRI+KDGNF G  AFK+ FPPGFRPN SYLE  E+WQKM+FPSPYLNARRFDAADPKARKRVVAVLHE LSLTMEKR+   QLDAFH E+LLPS+L
Subjt:  NRKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKL

Query:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNS
        +LCL+KHQGIFYITNKGAR TV LK+AY GS L +KCPLLL +DRF++LCGR++ N ++
Subjt:  LLCLLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNS

AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein2.7e-4331.5Show/hide
Query:  MRPKRKIYYRVDEL--DKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK---EVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEE
        + P R    R  EL  D V++  KK  L+L +  I+ SQ  + +SLR L K   ++G  ++  F+A++ KY  +F +          ++T++AE++  +E
Subjt:  MRPKRKIYYRVDEL--DKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK---EVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEE

Query:  HKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKR
         ++++ +E ++V  LRKL+M+S+D R+ LE I  + ++LGLP +F+ ++   YP++F V        L L +WD  LA+SA E        +S  +NR R
Subjt:  HKVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKR

Query:  VRISKDGNFSGPFAF-KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLC
            ++     P  F ++  P G   + S    + +++ M + SPY +     +   +  K    V+HE LSLT EKR     L  F  EF    +L   
Subjt:  VRISKDGNFSGPFAF-KMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLC

Query:  LLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL
        L++H  +FY++ KG R +V L+EAY  S L DK PL L  ++  +L
Subjt:  LLKHQGIFYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL

AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein1.6e-3232.11Show/hide
Query:  PKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK-----EVGFVQKWNFMAVIEKYSSIFYVDSGSCRR-PYVRLTNKAEKIASEEH
        PK++   R    D  ME++KK   ++K  ++I SQ +  I++  L+       +GF Q     A + K+  +F +     +R  Y RLT KA      EH
Subjt:  PKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEK-----EVGFVQKWNFMAVIEKYSSIFYVDSGSCRR-PYVRLTNKAEKIASEEH

Query:  KVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----AHLHLENWDSSLAISAREEGFGRGRDVSSCEN
        +      P  V  LRKL+M+S   R+ LE++    +E GLP DF+ S+I ++P+FF +  +DG+     ++ +   D +L+I A E        V   E 
Subjt:  KVKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGK----AHLHLENWDSSLAISAREEGFGRGRDVSSCEN

Query:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP
        R +   ++D  FS    F + FPPGF+    +   + +WQ++ + SPY +   +D     A  +  KR VA +HE LSLT+EK++   ++  F     LP
Subjt:  RKRVRISKDGNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFD----AADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLP

Query:  SKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL
         KL   LL+HQGIFYI+   N G   TV L+E Y+   L +   + L   R   L
Subjt:  SKLLLCLLKHQGIFYIT---NKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL

AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein7.1e-4431.87Show/hide
Query:  RVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLE---KEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIV
        RV EL+   E  K  S ++ L+ +++ ++   +++R  E   +++   +       I K   +F +        +  LT   E +  E  K+        
Subjt:  RVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLE---KEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPIV

Query:  VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEV-DGKAHLHLENWDSSLAISARE-EGFGRGRDVSSCENRKRVRISKDGNF
         +++ + LM+SVD ++PL+ I     + GLP DF+ + +  +P+ F V ++ DG+ +L L +W+ + AI+  E +  G   D   CE+       K G  
Subjt:  VKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEV-DGKAHLHLENWDSSLAISARE-EGFGRGRDVSSCENRKRVRISKDGNF

Query:  SGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYI
        S   AF M FPP ++    Y   +E +QK  + SPY +AR  +A   +  KR +AV+HE LS T+EKR+ +  L  F REF++P KL+   LKH GIFY+
Subjt:  SGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYI

Query:  TNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDK
        + +G R +V L E YEG  L +KCPL+L  ++ L   G R +
Subjt:  TNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDK

AT5G48040.1 Ubiquitin carboxyl-terminal hydrolase family protein6.6e-3429.79Show/hide
Query:  ELDKVMELQKKPSLILKLINIIQSQ---KHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIF----YVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPI
        ELD V+  +K    +  L+++I +    +     L     ++G  Q+    A I +Y +IF    Y DS     P   LT +   +  EE  V    E  
Subjt:  ELDKVMELQKKPSLILKLINIIQSQ---KHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIF----YVDSGSCRRPYVRLTNKAEKIASEEHKVKSAMEPI

Query:  VVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSV----KEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKD
        V+  L KLLML+ +  + L +I+ +  +LGLP D++ SLI ++P+ FS+     ++DG   L L +WD  LA+S                   ++++ +D
Subjt:  VVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSV----KEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKD

Query:  GNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI
               AF + F  GF      +E L+ WQ++ + SPY++A   D     + KR V V HE L LT+ K+     +    + F LP K      +H GI
Subjt:  GNFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGI

Query:  FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL
        FYI+ K    TV+L+EAY+   L +K PL+   ++F ++
Subjt:  FYITNKGARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCACAAATCTAGCGGTGGAATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCATCCCTTATA
CTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATCCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTT
ATTGAGAAGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCTTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAG
GTTAAGAGTGCAATGGAACCAATTGTAGTTAAGAATTTGAGGAAGCTGTTGATGCTGTCGGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATAGCGTCT
GAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAAT
TGGGATTCTTCGCTTGCAATCAGTGCTCGGGAGGAAGGATTCGGTAGAGGCAGAGATGTATCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCAAAGGATGGC
AACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCT
TCTCCGTACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGG
ATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTGAAGCATCAAGGAATCTTCTACATCACTAATAAA
GGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGTTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTATGATAGATTCCTTTCACTCTGTGGT
AGGAGGGACAAGAATTGCAATTCACCCCAGGTTCGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCACAAATCTAGCGGTGGAATGAGACCGAAGAGGAAAATATATTATAGAGTTGATGAACTTGACAAAGTTATGGAGTTGCAGAAAAAGCCATCCCTTATA
CTGAAGCTTATAAACATTATCCAATCTCAAAAGCACAAGTTTATATCCTTGAGGGACTTGGAGAAAGAAGTGGGATTTGTCCAAAAATGGAATTTCATGGCTGTT
ATTGAGAAGTACTCTTCGATTTTTTATGTTGATTCTGGAAGCTGTAGAAGGCCTTATGTTAGGCTCACCAATAAAGCTGAAAAGATTGCTAGTGAAGAACATAAG
GTTAAGAGTGCAATGGAACCAATTGTAGTTAAGAATTTGAGGAAGCTGTTGATGCTGTCGGTTGACTGTCGAGTACCGCTCGAAAATATAGAGTTCATAGCGTCT
GAATTGGGTTTGCCTTGTGACTTCAAAACTTCATTGATTCCTGAGTACCCTGAATTCTTTTCAGTGAAGGAAGTTGATGGGAAAGCCCACCTACATTTGGAGAAT
TGGGATTCTTCGCTTGCAATCAGTGCTCGGGAGGAAGGATTCGGTAGAGGCAGAGATGTATCTTCTTGTGAGAATCGAAAAAGAGTTCGAATATCAAAGGATGGC
AACTTTTCTGGTCCATTTGCATTCAAGATGTGTTTTCCTCCAGGCTTTAGGCCAAACATGAGTTACCTTGAACATCTTGAAAGGTGGCAGAAAATGGATTTTCCT
TCTCCGTACTTGAACGCGAGGAGATTTGACGCAGCTGATCCGAAGGCAAGAAAGAGAGTCGTTGCTGTTCTTCACGAGTTTCTAAGCTTGACAATGGAAAAAAGG
ATGAGATCAACACAATTGGATGCATTTCATAGGGAGTTTCTTCTTCCATCAAAACTATTGCTGTGCTTGTTGAAGCATCAAGGAATCTTCTACATCACTAATAAA
GGTGCAAGGAGTACAGTACTTCTGAAAGAAGCCTATGAAGGTTCAGTTTTGAGTGATAAATGCCCCTTGCTGTTGCACTATGATAGATTCCTTTCACTCTGTGGT
AGGAGGGACAAGAATTGCAATTCACCCCAGGTTCGTTTCTAG
Protein sequenceShow/hide protein sequence
MRHKSSGGMRPKRKIYYRVDELDKVMELQKKPSLILKLINIIQSQKHKFISLRDLEKEVGFVQKWNFMAVIEKYSSIFYVDSGSCRRPYVRLTNKAEKIASEEHK
VKSAMEPIVVKNLRKLLMLSVDCRVPLENIEFIASELGLPCDFKTSLIPEYPEFFSVKEVDGKAHLHLENWDSSLAISAREEGFGRGRDVSSCENRKRVRISKDG
NFSGPFAFKMCFPPGFRPNMSYLEHLERWQKMDFPSPYLNARRFDAADPKARKRVVAVLHEFLSLTMEKRMRSTQLDAFHREFLLPSKLLLCLLKHQGIFYITNK
GARSTVLLKEAYEGSVLSDKCPLLLHYDRFLSLCGRRDKNCNSPQVRF