; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G003590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionpolygalacturonase-like
Genome locationCmo_Chr19:3156180..3158515
RNA-Seq ExpressionCmoCh19G003590
SyntenyCmoCh19G003590
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006810 - transport (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932928.1 polygalacturonase-like [Cucurbita moschata]9.2e-15076.99Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

XP_022973590.1 polygalacturonase-like [Cucurbita maxima]4.0e-14575.07Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI IDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIW+CKHSGNNCPDGAPNLEITNAQNVII+GLASINSQ+FNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCS TNPC GLTLEDIKVTYN+QIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

XP_022973863.1 polygalacturonase-like [Cucurbita maxima]2.3e-14575.07Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTD SPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GS IW+CKHSGNNCPDGAPNLEITNAQNVII+GLASINSQIFNIVV+GCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCSPTNPC GLTLEDIKVTYN+QIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

XP_023553779.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]2.5e-14775.89Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWI FKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GS IWDCKHSGNNCPDGAPNLEITNAQ+VIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASC+GAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

XP_023553780.1 polygalacturonase-like [Cucurbita pepo subsp. pepo]1.1e-14575.07Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI IDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIWDCKHSGN+CPDGA NLEITNAQNVII+GL SINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   IS+
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASC+GAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

TrEMBL top hitse value%identityAlignment
A0A6J1F362 polygalacturonase-like4.5e-15076.99Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

A0A6J1I926 polygalacturonase-like9.6e-14574.52Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPA+IHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWI FKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIW+CKHSGNNCPDGA NLEITNAQNVII+GLASINSQ+FNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   IS+
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSAT+IGVKFDCSPTNPCTGLTLEDIKVTY+DQIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

A0A6J1IBR5 polygalacturonase-like1.9e-14575.07Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITI IDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIW+CKHSGNNCPDGAPNLEITNAQNVII+GLASINSQ+FNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCS TNPC GLTLEDIKVTYN+QIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

A0A6J1IDK7 polygalacturonase-like2.1e-14474.25Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTDASPVLQTAWAKACDSTGPA+IHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWI FKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSGIW+CKHSGNNCPDGA NLEITNAQNVII+GLASINSQ+FNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   IS+
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSAT+IGVKFDCSPTNPCTGLTLEDIKVTY+DQIAKASCKGAKGTASG+VEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

A0A6J1IEE1 polygalacturonase-like1.1e-14575.07Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        +IVSLGAKPDGKTD SPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GS IW+CKHSGNNCPDGAPNLEITNAQNVII+GLASINSQIFNIVV+GCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NLWIESVTCGPGHG                                                                                   ISE
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
        VTYEDIKGTSATEIGVKFDCSPTNPC GLTLEDIKVTYN+QIAKASCKGAKGTASGVVEPASCLE
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

SwissProt top hitse value%identityAlignment
O22818 Probable polygalacturonase At2g438602.0e-6739.62Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG
        N++S GAKPDG  D++     AW  AC S  P TI VP G F V +  F+G  CK   I+IRI G++VA  D +++A +K WI F+DV  +SI+GG++D 
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG

Query:  KGSGIWDCKHS-GNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPG
        +G+ +W CK++ G+NCP GA +L  + + N+ I GL SINSQ F+IV+    NVNI GVKVS   +SPNTDGIHV+ S  V I +S IGTGDDCISIGPG
Subjt:  KGSGIWDCKHS-GNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPG

Query:  TTNLWIESVTCGPGHGI----------------------------------------------------------------------------------S
        +TN++I+++ CGPGHGI                                                                                  S
Subjt:  TTNLWIESVTCGPGHGI----------------------------------------------------------------------------------S

Query:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
         V YEDI GTS TE+ V  DCS   PCTG+ ++D+ +    + A+ASC  A G+A+ VV    CL+
Subjt:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

P26216 Exopolygalacturonase1.2e-4633.24Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDG
        +I  LGA  +GKTD++  +Q AWA AC  TG  TI +P G F V   +F GPCK + +TI++DG L+A++D+        WI    V+ L I G G +DG
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDG

Query:  KGSGIWDCKHSGNNCPDG-----APN-LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCI
        +G  +W    S N+C         PN L +    N  + G+  +NS+ F++ ++ C+++ I+ V V+ PGDSPNTDGIH+ +SS +TI ++ IG GDDCI
Subjt:  KGSGIWDCKHSGNNCPDG-----APN-LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCI

Query:  SIGPGTTNLWIESVTCGPGHGIS-----------------------------------------------------------------------------
        SIGPGT+ + I  VTCGPGHGIS                                                                             
Subjt:  SIGPGTTNLWIESVTCGPGHGIS-----------------------------------------------------------------------------

Query:  -------EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAK--ASCKGAKGTASGVVEPASC
               +VT+++I GTS+T   V   C+   PCTG+T++D+ V Y+    K  A C  AKG+  G ++  +C
Subjt:  -------EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAK--ASCKGAKGTASGVVEPASC

P35338 Exopolygalacturonase4.0e-4733.24Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDG
        +I  LGA  +GKTD++  +Q AWA AC  TG  TI +P G F V   +F GPCK + +TI++DG L+A++D+    +   WI    V+ L I G G +DG
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDG

Query:  KGSGIWDCKHSGNNCPDG-----APN-LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCI
        +G  +W    S N+C         PN L +    N  + G+  +NS+ F++ ++ C+N+ I+ V V+ PGDSPNTDGIH+ +SS +TI ++ IG GDDCI
Subjt:  KGSGIWDCKHSGNNCPDG-----APN-LEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCI

Query:  SIGPGTTNLWIESVTCGPGHGIS-----------------------------------------------------------------------------
        SIGPGT+ + I  VTCGPGHGIS                                                                             
Subjt:  SIGPGTTNLWIESVTCGPGHGIS-----------------------------------------------------------------------------

Query:  -------EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAK--ASCKGAKGTASGVVEPASC
               +VT+++I GTS+T   +   C+   PCTG T++D+ V Y+    K  A C  AKG+  G ++  +C
Subjt:  -------EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAK--ASCKGAKGTASGVVEPASC

P35339 Exopolygalacturonase8.3e-4541.22Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDG
        +I  LGA  +GKTD++  +Q AWA AC  TG  TI +P G F V   +F GPCK + +TI+++G L+A++D+        WI    V+ L I G G +DG
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHG-GVIDG

Query:  KGSGIW---------DCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGD
        +G  +W         DCK   N       +L +    N  + G+  +NS+ F++ ++ C+++ I+ V V+ PGDSPNTDGIH+ +SS VTI ++ IG GD
Subjt:  KGSGIW---------DCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGD

Query:  DCISIGPGTTNLWIESVTCGPGHGISEVT---YEDIKGTSATEIGVKFDCSPTNPCTGLTLE
        DCISIGPGT+ + I  VTCGPGHGIS  +   Y+D K    T+I VK DC+      G+ ++
Subjt:  DCISIGPGTTNLWIESVTCGPGHGISEVT---YEDIKGTSATEIGVKFDCSPTNPCTGLTLE

P48979 Polygalacturonase2.7e-8846.58Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        N+ SLGAK DGKTD++    +AWAKAC S  P  I+VP GTF+++   F+GPCKNNAIT RI GTLVA SD +V+     WI F  VNG++I GG++DG+
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKH-SGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGT
        G+ +W CK   G +CP GA  L  +++ N+++ GLAS+NSQ+F+IV++  QNV +QGV+VS  G+SPNTDGIHVQ SS VTIL+S I TGDDC+SIGPGT
Subjt:  GSGIWDCKH-SGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGT

Query:  TNLWIESVTCGPGHG-----------------------------------------------------------------------------------IS
        +NLWIE V CGPGHG                                                                                   IS
Subjt:  TNLWIESVTCGPGHG-----------------------------------------------------------------------------------IS

Query:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCL
        +VTYEDI GTSATE+ VKFDCSP +PC  + LED+K+TY +Q A++SC  A GT  GVV+P SCL
Subjt:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCL

Arabidopsis top hitse value%identityAlignment
AT1G05650.1 Pectin lyase-like superfamily protein1.4e-6637.26Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        N+VS GAKPDG TD++     AW  AC S   AT+ VP GTF ++  +F GPCK+  IT ++ GT+VA  D +    + +WI F  VN  S+ GG  D +
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
        GSG W C+ SG NCP G  ++   +A++VII G+ S+NSQ+ ++ ++GC NV ++ +++  PGDSPNTDG  VQ S+ VT+  S + TGDDC++IG GT 
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHGIS-----------------------------------------------------------------------------------E
        N  I  + CGPGHG+S                                                                                   +
Subjt:  NLWIESVTCGPGHGIS-----------------------------------------------------------------------------------E

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQI-AKASCKGAKGTASGVVEPASCL
        VTY++I+GTSAT+  +K  CS +NPCTG+TL+DIK+TYN    A + C  A G   GV++P SCL
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQI-AKASCKGAKGTASGVVEPASCL

AT1G05660.1 Pectin lyase-like superfamily protein1.4e-6637.53Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK
        N+VS GAKPDG TD++     AW  AC S   AT+ VP GTF ++  +F GPCK+  IT ++ GT++A  D +    +  WI F  VN  S+ GG  D +
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGK

Query:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT
         +G W C+ SG NCP G  ++   +A++VII G+ S+NSQ+ ++ ++GC NV ++ VK+  PG+SPNTDG HVQ S+ VT   S + TGDDC++IGPGT 
Subjt:  GSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTT

Query:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE
        NL I  + CGPGHG                                                                                   IS+
Subjt:  NLWIESVTCGPGHG-----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQI-AKASCKGAKGTASGVVEPASCL
        VTY++I+GTSAT+  +K  CS ++PCTG+TL+DIK+TYN    A + C  A G + GV++P SCL
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQI-AKASCKGAKGTASGVVEPASCL

AT2G43860.1 Pectin lyase-like superfamily protein1.4e-6839.62Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG
        N++S GAKPDG  D++     AW  AC S  P TI VP G F V +  F+G  CK   I+IRI G++VA  D +++A +K WI F+DV  +SI+GG++D 
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG

Query:  KGSGIWDCKHS-GNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPG
        +G+ +W CK++ G+NCP GA +L  + + N+ I GL SINSQ F+IV+    NVNI GVKVS   +SPNTDGIHV+ S  V I +S IGTGDDCISIGPG
Subjt:  KGSGIWDCKHS-GNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPG

Query:  TTNLWIESVTCGPGHGI----------------------------------------------------------------------------------S
        +TN++I+++ CGPGHGI                                                                                  S
Subjt:  TTNLWIESVTCGPGHGI----------------------------------------------------------------------------------S

Query:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE
         V YEDI GTS TE+ V  DCS   PCTG+ ++D+ +    + A+ASC  A G+A+ VV    CL+
Subjt:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE

AT2G43870.1 Pectin lyase-like superfamily protein3.1e-7941.48Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG
        N++S GAKPDGKTDA+      W  AC S+ P TI VP G F ++S +F+G  CK   +T RIDGTLVA +D +V+     WI F+ ++G++++GGV+D 
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG

Query:  KGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGT
        +G+ +WDCK SG NCP GA  +   ++ NV++ GL S+NSQ+F++V++GC NV +QGVKV   G+SPNTDGIHVQ SS V+I ++ I TGDDC+SIGPGT
Subjt:  KGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGT

Query:  TNLWIESVTCGPGHG----------------------------------------------------------------------------------ISE
          LWIE+V CGPGHG                                                                                  IS+
Subjt:  TNLWIESVTCGPGHG----------------------------------------------------------------------------------ISE

Query:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCL
        V + DI GTSATE+GVK DCS   PCTG+ LED+K+TY ++ A ++C  A G  +G  +P +CL
Subjt:  VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCL

AT3G59850.1 Pectin lyase-like superfamily protein1.3e-8042.47Show/hide
Query:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG
        NI+S GAKPDGKTD++      WAKAC S  P TI VP G F ++S  F+G  CK  ++T RI GTLVA SD +V+ K   WI F+ ++G+S++GGV+D 
Subjt:  NIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNG-PCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDG

Query:  KGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGT
        +G+ +W CK SG NCP GA ++   +++NV+I GL S+NSQ+F++ ++GC NV + GVKVS  G+SPNTDGIHVQ SS V+IL+S I TGDDC+SIGPGT
Subjt:  KGSGIWDCKHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGT

Query:  TNLWIESVTCGPGHG-----------------------------------------------------------------------------------IS
          LWIE+V CGPGHG                                                                                   IS
Subjt:  TNLWIESVTCGPGHG-----------------------------------------------------------------------------------IS

Query:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCL
        +V + DI GTSATE+GVK DCS   PCTG+ ++D+K+TY ++ A   C  A G+ +G   P SCL
Subjt:  EVTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAAAATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGCCTGTACTTCAAACAGCATGGGCCAAGGCTTGTGACTCGACCGGACCTGCTAC
TATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGTTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCTTCAG
ACATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGAAAAGGATCTGGCATATGGGATTGT
AAACACTCTGGGAATAATTGCCCCGATGGAGCACCGAATCTTGAAATCACAAATGCACAAAATGTTATCATCGATGGATTAGCTTCAATTAATAGCCAAATATTTAACAT
TGTGGTGCACGGTTGCCAAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCGAACACTGATGGCATCCATGTGCAGGAGTCATCAGATGTGACCA
TCCTTAGTTCCAACATCGGCACCGGTGATGACTGCATCTCAATTGGTCCAGGGACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCACGGAATCAGCGAA
GTAACTTATGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAGCCCAACAAATCCTTGCACTGGACTCACCTTAGAAGACATTAAAGTGAC
TTATAATGATCAAATCGCTAAAGCTTCATGCAAAGGTGCCAAAGGAACTGCCTCTGGTGTGGTTGAACCTGCTAGTTGCTTAGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAAAAATATTGTTAGTCTTGGAGCCAAGCCCGATGGAAAGACCGATGCCTCGCCTGTACTTCAAACAGCATGGGCCAAGGCTTGTGACTCGACCGGACCTGCTAC
TATTCACGTGCCCATAGGCACATTCTACGTTCAAAGTGGGAGTTTTAATGGGCCTTGTAAGAACAATGCTATTACTATTCGCATCGATGGCACTCTTGTGGCTTCTTCAG
ACATTCAAGTTCTAGCTAAAACTAAAGCTTGGATTGGGTTTAAAGACGTAAATGGGCTTTCCATTCATGGCGGTGTTATTGATGGAAAAGGATCTGGCATATGGGATTGT
AAACACTCTGGGAATAATTGCCCCGATGGAGCACCGAATCTTGAAATCACAAATGCACAAAATGTTATCATCGATGGATTAGCTTCAATTAATAGCCAAATATTTAACAT
TGTGGTGCACGGTTGCCAAAATGTGAACATTCAAGGAGTGAAGGTCTCGGATCCTGGCGATAGTCCGAACACTGATGGCATCCATGTGCAGGAGTCATCAGATGTGACCA
TCCTTAGTTCCAACATCGGCACCGGTGATGACTGCATCTCAATTGGTCCAGGGACCACCAACTTATGGATAGAAAGTGTTACATGTGGACCTGGGCACGGAATCAGCGAA
GTAACTTATGAAGATATCAAGGGAACATCAGCCACTGAAATAGGAGTCAAATTTGATTGTAGCCCAACAAATCCTTGCACTGGACTCACCTTAGAAGACATTAAAGTGAC
TTATAATGATCAAATCGCTAAAGCTTCATGCAAAGGTGCCAAAGGAACTGCCTCTGGTGTGGTTGAACCTGCTAGTTGCTTAGAATAG
Protein sequenceShow/hide protein sequence
MEKNIVSLGAKPDGKTDASPVLQTAWAKACDSTGPATIHVPIGTFYVQSGSFNGPCKNNAITIRIDGTLVASSDIQVLAKTKAWIGFKDVNGLSIHGGVIDGKGSGIWDC
KHSGNNCPDGAPNLEITNAQNVIIDGLASINSQIFNIVVHGCQNVNIQGVKVSDPGDSPNTDGIHVQESSDVTILSSNIGTGDDCISIGPGTTNLWIESVTCGPGHGISE
VTYEDIKGTSATEIGVKFDCSPTNPCTGLTLEDIKVTYNDQIAKASCKGAKGTASGVVEPASCLE