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CmoCh19G003740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationCmo_Chr19:3551346..3562604
RNA-Seq ExpressionCmoCh19G003740
SyntenyCmoCh19G003740
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ANS54536.1 NADH dehydrogenase subunit 1 [Cynomorium coccineum]6.9e-1873.97Show/hide
Query:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        PL   + P     IL    + K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

ANS54564.1 NADH dehydrogenase subunit 1 [Cynomorium coccineum]6.9e-1873.97Show/hide
Query:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        PL   + P     IL    + K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

CAB4080594.1 unnamed protein product [Lactuca saligna]2.8e-1989.09Show/hide
Query:  HRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPK
        HRKLVRGHR++SSVLLQV RQPLPS NDCRPPDPLVC IHP PQAQILGAEYNPK
Subjt:  HRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPK

KAA0047140.1 hypothetical protein E6C27_scaffold49037G00040 [Cucumis melo var. makuwa]2.4e-1865.52Show/hide
Query:  PPDPLVCYIH---PSPQAQILGAEYNP-------KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVL
        PPD     +H   P P   +    + P       K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR VL
Subjt:  PPDPLVCYIH---PSPQAQILGAEYNP-------KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVL

QRZ60074.1 NADH dehydrogenase subunit 1 [Agrostemma githago]1.2e-1794.34Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVL
        K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR VL
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVL

TrEMBL top hitse value%identityAlignment
A0A2Z1U7X0 NADH-ubiquinone oxidoreductase chain 13.3e-1873.97Show/hide
Query:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        PL   + P     IL    + K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

A0A2Z1UA77 NADH-ubiquinone oxidoreductase chain 13.3e-1873.97Show/hide
Query:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        PL   + P     IL    + K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  PLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

A0A5A7TVE9 Uncharacterized protein1.1e-1865.52Show/hide
Query:  PPDPLVCYIH---PSPQAQILGAEYNP-------KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVL
        PPD     +H   P P   +    + P       K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR VL
Subjt:  PPDPLVCYIH---PSPQAQILGAEYNP-------KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYVL

A0A6S7LK19 Uncharacterized protein1.3e-1989.09Show/hide
Query:  HRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPK
        HRKLVRGHR++SSVLLQV RQPLPS NDCRPPDPLVC IHP PQAQILGAEYNPK
Subjt:  HRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPK

E9KZL0 NADH-ubiquinone oxidoreductase chain 15.7e-1896.15Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        KRI GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

SwissProt top hitse value%identityAlignment
P26845 NADH-ubiquinone oxidoreductase chain 12.5e-1587.23Show/hide
Query:  ILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA
        I GSIWFSIKV+ FLF+YIWVRAAFPRYRYDQLM LG KVFLPLSLA
Subjt:  ILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA

P31839 NADH-ubiquinone oxidoreductase chain 17.1e-1891.84Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA
        K+I GSIWFSIKVI FLFLYIWVRAAFPRYRYDQLMGLG KVFLPLSLA
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA

P92558 NADH-ubiquinone oxidoreductase chain 11.2e-1789.8Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA
        K+I GSIWFSIKV+ FLFLYIWVRAAFPRYRYDQLMGLG KVFLPLSLA
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLA

Q01148 NADH-ubiquinone oxidoreductase chain 16.4e-1990.38Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        K+I  SIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

Q01300 NADH-ubiquinone oxidoreductase chain 13.4e-2094.23Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        K+I GSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

Arabidopsis top hitse value%identityAlignment
ATMG00516.1 NADH dehydrogenase 1C4.1e-2192.31Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        K+I GSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

ATMG00520.1 Intron maturase, type II family protein6.0e-0490Show/hide
Query:  MVLESIYDPEFPNTSHFDSG
        MVLESIYDPEFP+TSHF SG
Subjt:  MVLESIYDPEFPNTSHFDSG

ATMG01120.1 NADH dehydrogenase 1B4.1e-2192.31Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        K+I GSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV

ATMG01275.1 NADH dehydrogenase 1A4.1e-2192.31Show/hide
Query:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV
        K+I GSIWFSIKV+LFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLAR V
Subjt:  KRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLMGLGRKVFLPLSLARYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAAACACATCGCACTTCGACTCGGGACATCGTAAATTGGTCCGCGGGCATCGCAATCAGTCTTCTGTCCTACTACA
AGTGCTGCGACAACCTTTACCAAGTCTGAACGATTGTCGACCACCAGATCCGCTGGTCTGCTATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCAGAATATAATC
CCAAAAGGATCCTGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTCTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATG
GGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGTATGTTCTTGGTCAGAGTGATCTATATCCTCCGGGCAACGAAGTGAGGGCTATCGAGTTGGGTTTCTT
TACGCATTGCAGCTTTGTTTTGTTGGGATCTTGGCCTGGGGTCAGGTCCACTTCGAGAATGGCTTGGGGTTGGAAGGCTGGCTCTTGTTCTGTTTTTAGCCGTGAAAGCG
GGGAACTCTCTTCCAAGAGATTTGCTCTTGTATGGAAGAAGCTGGCCGTCTTCAGGCACATCAAGCTAATTCCCTGGACTGGGAGAAAAGGAATCTTCATACTAACACTA
ATCCGACTGTCTTCTAACTATCAGATGCTACGCTCTATCCTTCAATCGATTGAGCCTGTCCTCTTTGGGGATTCTACTCTAAGCCTGGAAACAAACCCATCTCTTCTTTT
CGCTGGCTGGGAAGTTCCTTACATGAATGGGCAACCACCCACCCTAGCCTGTCTAAGTCAATCTCCACTATCAGCGGAATGTCGAGCTACTTCTTTAGGATTGCGCACTG
ACCTTATCCTTCTGACCTACGAGCCAGCCAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTACTCGAATCCATTTACGATCCCGAGTTTCCAAACACATCGCACTTCGACTCGGGACATCGTAAATTGGTCCGCGGGCATCGCAATCAGTCTTCTGTCCTACTACA
AGTGCTGCGACAACCTTTACCAAGTCTGAACGATTGTCGACCACCAGATCCGCTGGTCTGCTATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCAGAATATAATC
CCAAAAGGATCCTGGGCTCGATCTGGTTTAGTATCAAGGTGATTCTCTTTCTCTTTCTATATATATGGGTCCGTGCAGCATTTCCACGATATCGTTATGATCAATTAATG
GGACTTGGCCGGAAAGTGTTCTTGCCTCTATCATTAGCTCGGTATGTTCTTGGTCAGAGTGATCTATATCCTCCGGGCAACGAAGTGAGGGCTATCGAGTTGGGTTTCTT
TACGCATTGCAGCTTTGTTTTGTTGGGATCTTGGCCTGGGGTCAGGTCCACTTCGAGAATGGCTTGGGGTTGGAAGGCTGGCTCTTGTTCTGTTTTTAGCCGTGAAAGCG
GGGAACTCTCTTCCAAGAGATTTGCTCTTGTATGGAAGAAGCTGGCCGTCTTCAGGCACATCAAGCTAATTCCCTGGACTGGGAGAAAAGGAATCTTCATACTAACACTA
ATCCGACTGTCTTCTAACTATCAGATGCTACGCTCTATCCTTCAATCGATTGAGCCTGTCCTCTTTGGGGATTCTACTCTAAGCCTGGAAACAAACCCATCTCTTCTTTT
CGCTGGCTGGGAAGTTCCTTACATGAATGGGCAACCACCCACCCTAGCCTGTCTAAGTCAATCTCCACTATCAGCGGAATGTCGAGCTACTTCTTTAGGATTGCGCACTG
ACCTTATCCTTCTGACCTACGAGCCAGCCAAGAATTAA
Protein sequenceShow/hide protein sequence
MVLESIYDPEFPNTSHFDSGHRKLVRGHRNQSSVLLQVLRQPLPSLNDCRPPDPLVCYIHPSPQAQILGAEYNPKRILGSIWFSIKVILFLFLYIWVRAAFPRYRYDQLM
GLGRKVFLPLSLARYVLGQSDLYPPGNEVRAIELGFFTHCSFVLLGSWPGVRSTSRMAWGWKAGSCSVFSRESGELSSKRFALVWKKLAVFRHIKLIPWTGRKGIFILTL
IRLSSNYQMLRSILQSIEPVLFGDSTLSLETNPSLLFAGWEVPYMNGQPPTLACLSQSPLSAECRATSLGLRTDLILLTYEPAKN