; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G003960 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G003960
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description60S ribosomal protein L37a
Genome locationCmo_Chr19:4601356..4603857
RNA-Seq ExpressionCmoCh19G003960
SyntenyCmoCh19G003960
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF9668729.1 hypothetical protein SADUNF_Sadunf14G0033900 [Salix dunnii]4.6e-3459.12Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY              L T  +W +  +   G                  TRYGASLRKQIKKMEVSQHSK+FCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KAG1359236.1 60S ribosomal protein L37a [Cocos nucifera]6.1e-3459.12Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                   SW                     T + S TRYGASLRKQIKKMEVSQH+KYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KAG2381106.1 60S ribosomal protein [Vigna angularis]7.9e-3457.86Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        +TKRTKKAGIVGKY                               G C   S+  + +    TRYGASLRKQIKKMEVSQHSK+FCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KAG6780710.1 hypothetical protein POTOM_013578 [Populus tomentosa]1.4e-3359.75Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKYV   + LK+       TR ++                         + TRYGASLRKQIKKMEVSQHSK+FCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KVH88611.1 hypothetical protein Ccrd_026305 [Cynara cardunculus var. scolymus]7.9e-3458.49Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSKYFCEFCGK      F  
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
             K +   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

TrEMBL top hitse value%identityAlignment
A0A0E0JMF3 Uncharacterized protein3.2e-3359.12Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY     F K++   LL   S +S                 +  + +   TRYGASLRKQIKKMEVSQHSKYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A103XDD5 Uncharacterized protein3.8e-3458.49Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSKYFCEFCGK      F  
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
             K +   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A1D6ECX8 60S ribosomal protein L37a-27.2e-3350.79Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSKYFCEFCGK     P L 
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKS------------------------------LSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
         FF+ KS                              LS  +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  KFFISKS------------------------------LSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A200Q8W6 Ribosomal protein L37ae4.2e-3357.59Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQH+KYFCEFCGKAS  +    
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
                  +YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

A0A6A5MJL7 Uncharacterized protein (Fragment)7.2e-3356.69Show/hide
Query:  TKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLPK
        TKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSK+FCEFCGK          
Subjt:  TKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLPK

Query:  FFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
          +S  +++ YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  FFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-14.8e-3455.35Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSKYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-24.8e-3455.35Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSKYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-19.1e-3354.09Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKA IVGKY                                                TRYGASLRKQIKKMEVSQH+KYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a3.7e-3456.6Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSKYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   YAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a4.1e-3355.06Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKAGIVGKY                                                TRYGASLRKQIKKMEVSQHSK+FCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
                   +AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein6.5e-3454.09Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        MTKRTKKA IVGKY                                                TRYGASLRKQIKKMEVSQH+KYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
                   Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein4.2e-3353.16Show/hide
Query:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP
        M KRTKK GIVGKY                                                TRYGAS+RKQIKKMEVSQHSKYFCEFCGK         
Subjt:  MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLP

Query:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
                   Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  KFFISKSLSLHYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATGTAAGATTCACTGTTTTCCTTAAAGTTGCGGGAGGTGTGCTCCTGGGCACAAGGTCCAGCTGGAGCGC
CTCGCCTCTCGGAAGGCGTGGCCAAGGCGCATGCCTTCCAAGAAGCATAGAGGCGCTCACTCAACATGCCTCTAGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTA
AAAAGATGGAAGTCAGTCAGCACAGCAAATACTTTTGTGAGTTCTGTGGAAAGGCAAGTAGTTGTGCTCCTTTTTTGCCCAAGTTTTTCATTTCCAAGTCACTTAGTCTT
CATTATGCAGTTAAGAGGAAGGCAGTTGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGGAGGTGCTTACACTCTTAACACTGCTAGTGCTGTGACAGTGAG
GAGCACTATTAGGAGGCTGAGAGAGCAAACTGAAAGCTAA
mRNA sequenceShow/hide mRNA sequence
TATTCTAGGGTTTCTCTCTGGTTCAAGTTCTTCCCACTTTCACCAAATCTTCTCCCGGAGATATTGTGGTCGGCCGAGCAGAAATGACAAAGAGAACCAAGAAGGCAGGC
ATTGTTGGAAAATATGTAAGATTCACTGTTTTCCTTAAAGTTGCGGGAGGTGTGCTCCTGGGCACAAGGTCCAGCTGGAGCGCCTCGCCTCTCGGAAGGCGTGGCCAAGG
CGCATGCCTTCCAAGAAGCATAGAGGCGCTCACTCAACATGCCTCTAGTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAAAAGATGGAAGTCAGTCAGCACAGCA
AATACTTTTGTGAGTTCTGTGGAAAGGCAAGTAGTTGTGCTCCTTTTTTGCCCAAGTTTTTCATTTCCAAGTCACTTAGTCTTCATTATGCAGTTAAGAGGAAGGCAGTT
GGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAGGCCGGAGGTGCTTACACTCTTAACACTGCTAGTGCTGTGACAGTGAGGAGCACTATTAGGAGGCTGAGAGAGCA
AACTGAAAGCTAAGCCATCTTCACTGCGTATTTGATATTTTTCTTTCTTTTTTTTTTTTTTTTCTAAAAGGAAAAGGATTGCTCCCTCCCTAGACTTATCTTCATATCAA
TGTTGTAGGAATTGGTTATTTTAAGTTAATTGAAACTGATCTTTTCTTCATTTCTTATATCGCACCAATTTCTTGTAATAGATTCTATTGATCATCAATTGAGTTTTACT
CAAGTAACGCATTTGGTGGCGAAAGTTGAAATTGATCGAATGACTTGTTTGCTA
Protein sequenceShow/hide protein sequence
MTKRTKKAGIVGKYVRFTVFLKVAGGVLLGTRSSWSASPLGRRGQGACLPRSIEALTQHASSTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSCAPFLPKFFISKSLSL
HYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES