; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G004280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G004280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWD repeat-containing protein RUP2-like
Genome locationCmo_Chr19:5158850..5160128
RNA-Seq ExpressionCmoCh19G004280
SyntenyCmoCh19G004280
Gene Ontology termsGO:0010224 - response to UV-B (biological process)
GO:0005515 - protein binding (molecular function)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily
IPR044616 - WD repeat-containing protein RUP1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571808.1 WD repeat-containing protein RUP2, partial [Cucurbita argyrosperma subsp. sororia]7.8e-16899.32Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP+DGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS+VRSPVCCVEFNPYGGALVVVGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

XP_022952662.1 WD repeat-containing protein RUP2-like [Cucurbita moschata]5.4e-169100Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

XP_022971842.1 WD repeat-containing protein RUP2-like [Cucurbita maxima]2.4e-16196.26Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        MGNE TPLRREW+FSLASVV SSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLS+LLPHDGTVA+LDHSRA EFCICTPAKLSSLRWKPG GGR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS+VRSPVCCVEFNPYGGALVVVGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGG  A VVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

XP_023554180.1 WD repeat-containing protein RUP2-like [Cucurbita pepo subsp. pepo]8.0e-16597.28Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        MGNES PLRREWTFSLASVVSSSSLIGP SDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP+DGTVAMLDH+RASEFCICTPAKLSSLRWKPGAGGR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        IL SGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTV+PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS+VRSPVCCVEFNPYGGALVVVGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        KAYGYDRRKMTEAVMVFEGHAKTVTYVKF+DGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

XP_038887335.1 WD repeat-containing protein RUP2-like [Benincasa hispida]1.7e-14386.1Show/hide
Query:  NESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGG
        NE+TP R EW F+LA++VSSSS IG ASDTLGVVEFDPSDSLIATAGIARKIRGY L NLLP   H+GT+  LDHSRASEFCICTPAKLSSLRWKPG  G
Subjt:  NESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP---HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGG

Query:  RILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCAD
        RILGSGDYDGVVMEYDLE KVP+FERDEHGGRRVWS+DYS VDP+VGASGSDDGTVQVWDTRCDG +CVAVVQPSVVRSPVCCVEFNPYGGALV VGCAD
Subjt:  RILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCAD

Query:  RKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        RKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTDGSLKMWK EE       ARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  RKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

TrEMBL top hitse value%identityAlignment
A0A0A0LHK2 Ubiquitin ligase protein cop13.4e-13783.62Show/hide
Query:  TPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP----HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRI
        TPLR EW F+LASVVSS +    ASDTLGVVEFDPSDSLIATAGIARKIRGY L NLLP    H+ T+  LDH+RAS+FCICTPAKLSSLRWKP A GRI
Subjt:  TPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLP----HDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRI

Query:  LGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRK
        LGSGDYDGVVMEYDLE KVP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVVRS VCCVEFNP+GG LV VGCADRK
Subjt:  LGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRK

Query:  AYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        AYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTDGSLKMWK EE    GGGARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKR
Subjt:  AYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

A0A5A7T553 WD repeat-containing protein RUP2-like1.9e-13582.09Show/hide
Query:  ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHD-----GTVAMLDHSRASEFCICTPAKLSSLRWKPGAG
        + +PL  EW F+LASVVSS +    ASDTLGV+EFDPSDSLIATAGIARKIRGY L NLLP D      T+  LDHSRAS+FCICTPAKLSSLRWKP A 
Subjt:  ESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHD-----GTVAMLDHSRASEFCICTPAKLSSLRWKPGAG

Query:  GRILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCA
         RILGSGDYDGVV EYDLE KVP+FERDEHGGRRVWS+DYSTV+P+VGASGSDDGTVQVWDTRC+  +CVAVVQPSVVRSPVCCVEFNPYGG LV VGCA
Subjt:  GRILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCA

Query:  DRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        DRKAYGYDRRKM E V+VFEGH KTVTYVKFVDGGT+VSASTDGSLKMWK EE    GGGARVVRTYEGHVNGRSFVGLSVWR GGLIGCGSEDKR
Subjt:  DRKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

A0A6A1VD73 WD repeat-containing protein RUP21.1e-11468.37Show/hide
Query:  RREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGT--------VAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        RREW F L +VVSSS+ +G  SDTLGV+EFDPSDS +AT GI+RKIR YSLS+LLPH+ +          +LDH+ A ++ ICTPAKLSSLRWKP +GGR
Subjt:  RREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGT--------VAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        +LGSGDYDGVVMEYDLEK++PVFERDEHGGRRVWS+DYS  DP++GASGSDDGTVQVWD RC+G +CVA VQPSV RSPVCCVEFNP GG L+ VGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        + YGYD RKM + V+VF+GH KTVTYV+F+D  TIVSA  DG LK+W   +       + V+RTY GHVN RSFVGLSVWRNGGL+GCGSE  +
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

A0A6J1GKZ5 WD repeat-containing protein RUP2-like2.6e-169100Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

A0A6J1I327 WD repeat-containing protein RUP2-like1.2e-16196.26Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        MGNE TPLRREW+FSLASVV SSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLS+LLPHDGTVA+LDHSRA EFCICTPAKLSSLRWKPG GGR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR
        ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS+VRSPVCCVEFNPYGGALVVVGCADR
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADR

Query:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGG  A VVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
Subjt:  KAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

SwissProt top hitse value%identityAlignment
P43254 E3 ubiquitin-protein ligase COP15.4e-3935.47Show/hide
Query:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL--PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERD
        +++ +  +EFD  D L ATAG++R I+ +  S+++  P D    +++ S        T +KLS L W       I  S DY+G+V  +D+  +  + E +
Subjt:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL--PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERD

Query:  EHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTY
        EH  +R WS+D+S  +P +  SGSDD  V+VW TR +     A V    +++ +CCV++NP     + VG AD   + YD R +++ + VF GH K V+Y
Subjt:  EHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTY

Query:  VKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE
        VKF+    + SASTD +L++W  ++          VRT+ GH N ++FVGL+V  N   + CGSE
Subjt:  VKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE

P93471 E3 ubiquitin-protein ligase COP13.2e-3935.85Show/hide
Query:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL--PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERD
        +++ +  +EFD  D L ATAG++R+I+ +  S ++  P D    +++        + T +KLS L W   A  +I  S DY+G+V  + +  +  + E +
Subjt:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL--PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERD

Query:  EHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTY
        EH  +R WS+D+S  DP +  SGSDD  V+VW T  +     A V    +++ +CCV++NP  G  + VG AD   + YD R ++  V VF GH K V+Y
Subjt:  EHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTY

Query:  VKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE
        VKF+    + SASTD +L++W  ++          VRT+ GH N ++FVGL+V      I CGSE
Subjt:  VKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE

Q8NHY2 E3 ubiquitin-protein ligase COP11.1e-3634.66Show/hide
Query:  SVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYD--
        + +S +S +   S  +  +EFD      A AG+ +KI+ Y    ++      A+  H   +E  +   +K+S + W       +L S DY+G V+ +D  
Subjt:  SVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYD--

Query:  LEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVM
          ++  V++  E   +R WS+D++ +DP + ASGSDD  V++W T  D  + VA ++    ++ VCCV+F+P     +  GCAD   + YD R   + +M
Subjt:  LEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVM

Query:  VFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSED
        VF+GH K V+Y KFV G  IVSASTD  LK+W         G    +R+++GH+N ++FVGL+   NG  I CGSE+
Subjt:  VFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSED

Q9FFA7 WD repeat-containing protein RUP24.5e-10262.46Show/hide
Query:  RREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHD---GT-VAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGS
        R EW  SL++VVSSSS    ASD +G +EFDP+D+++ATAGI+RKIR Y L +LL ++   GT V+ +D + A E+ ICTPAKLSSLRW+PG+GGR++GS
Subjt:  RREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHD---GT-VAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGS

Query:  GDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD--PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS-VVRSPVCCVEFNPYGGALVVVGCADRK
        GDYDGVVMEYDLEK+ PVFERDEHGGRRVWS+DY+       VGASGSDDGT+QVWD RC   + V VV+P+ + RS VCCVEF+P GG  V VGCADRK
Subjt:  GDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD--PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS-VVRSPVCCVEFNPYGGALVVVGCADRK

Query:  AYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
         Y YD RK+ +  +  +GH KTV+YV+F+DGGT+V+A TDG LK+W  E+G       RV+RTYEGHVN R+FVGLSVWRNG L GCGSE+ R
Subjt:  AYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

Q9LTJ6 WD repeat-containing protein RUP12.7e-8656.27Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        M  E+ P R +W  SL++VVSS+S     SD +G +EFDP+  +IAT GIARKIR Y LS+LL      +  DH  ASE  ICTPAKLSSL+W+P   GR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD-PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCAD
        ++GSGDYDGVV EYD+EK+VPV ERDEHGGRR+WS+DY+  +  ++GASGSDDGTVQ+WD R +G      V+P    + +C VEF+P+GG+ + VGCAD
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD-PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCAD

Query:  RKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        R AY YD R++ + ++V +GH KTVTY +F+D  TIV+ STDGSLK W      D   G RVVRTY GHVN R+FVGLSVWR+GGL+  GSE+ +
Subjt:  RKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

Arabidopsis top hitse value%identityAlignment
AT1G53090.1 SPA1-related 41.1e-3434.6Show/hide
Query:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERDEH
        +S+ +  + FD      ATAG+ +KI+ +   +++     +    H    E  + + +KLS + W      ++  S +++GVV  +D+ +   V E  EH
Subjt:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERDEH

Query:  GGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVK
          +RVWS+DYS+ DP + ASGSDDG+V++W     GV    +      ++ +CCV+F    G  +  G AD K Y YD R     +    GH KTV+YV+
Subjt:  GGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTYVK

Query:  FVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE
        FVD  T+VS+STD +LK+W        G     + ++ GH N ++FVGLSV  + G I  GSE
Subjt:  FVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE

AT2G32950.1 Transducin/WD40 repeat-like superfamily protein3.8e-4035.47Show/hide
Query:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL--PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERD
        +++ +  +EFD  D L ATAG++R I+ +  S+++  P D    +++ S        T +KLS L W       I  S DY+G+V  +D+  +  + E +
Subjt:  ASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL--PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGVVMEYDLEKKVPVFERD

Query:  EHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTY
        EH  +R WS+D+S  +P +  SGSDD  V+VW TR +     A V    +++ +CCV++NP     + VG AD   + YD R +++ + VF GH K V+Y
Subjt:  EHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGHAKTVTY

Query:  VKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE
        VKF+    + SASTD +L++W  ++          VRT+ GH N ++FVGL+V  N   + CGSE
Subjt:  VKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE

AT2G46340.1 SPA (suppressor of phyA-105) protein family7.5e-3635.92Show/hide
Query:  FSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL-----PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYD
        F     + S  L+  AS  +  + FDP +  IA AGI++KI+ +  +  +      H   V M++ S+ S  C+C  + + +           L S DYD
Subjt:  FSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLL-----PHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYD

Query:  GVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRR
        GVV  +D        +  EH  +R WS+D+S  DP    SGSDD +V++W    +      +  P    + VCCV+F+ Y   L+  G AD K Y YD R
Subjt:  GVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRR

Query:  KMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGG-GGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE
         +        GH K V+YVKF+D  TIVSASTD SLK+W   +    G        TY+GH N ++FVGLSV    G I CGSE
Subjt:  KMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGG-GGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSE

AT5G23730.1 Transducin/WD40 repeat-like superfamily protein3.2e-10362.46Show/hide
Query:  RREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHD---GT-VAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGS
        R EW  SL++VVSSSS    ASD +G +EFDP+D+++ATAGI+RKIR Y L +LL ++   GT V+ +D + A E+ ICTPAKLSSLRW+PG+GGR++GS
Subjt:  RREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHD---GT-VAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGS

Query:  GDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD--PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS-VVRSPVCCVEFNPYGGALVVVGCADRK
        GDYDGVVMEYDLEK+ PVFERDEHGGRRVWS+DY+       VGASGSDDGT+QVWD RC   + V VV+P+ + RS VCCVEF+P GG  V VGCADRK
Subjt:  GDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD--PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPS-VVRSPVCCVEFNPYGGALVVVGCADRK

Query:  AYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
         Y YD RK+ +  +  +GH KTV+YV+F+DGGT+V+A TDG LK+W  E+G       RV+RTYEGHVN R+FVGLSVWRNG L GCGSE+ R
Subjt:  AYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR

AT5G52250.1 Transducin/WD40 repeat-like superfamily protein1.9e-8756.27Show/hide
Query:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR
        M  E+ P R +W  SL++VVSS+S     SD +G +EFDP+  +IAT GIARKIR Y LS+LL      +  DH  ASE  ICTPAKLSSL+W+P   GR
Subjt:  MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGR

Query:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD-PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCAD
        ++GSGDYDGVV EYD+EK+VPV ERDEHGGRR+WS+DY+  +  ++GASGSDDGTVQ+WD R +G      V+P    + +C VEF+P+GG+ + VGCAD
Subjt:  ILGSGDYDGVVMEYDLEKKVPVFERDEHGGRRVWSLDYSTVD-PMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCAD

Query:  RKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR
        R AY YD R++ + ++V +GH KTVTY +F+D  TIV+ STDGSLK W      D   G RVVRTY GHVN R+FVGLSVWR+GGL+  GSE+ +
Subjt:  RKAYGYDRRKMTEAVMVFEGHAKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGAATCCACGCCGCTCCGTCGCGAATGGACCTTCTCCCTCGCCTCCGTCGTCTCCTCCTCCTCCCTCATTGGCCCCGCTTCCGACACTCTCGGCGTCGTCGA
ATTCGACCCTTCTGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACTCTCTTTCTAATCTCTTGCCGCATGACGGTACTGTTGCTATGTTGGACC
ACAGTCGTGCTTCTGAATTTTGTATCTGTACTCCGGCCAAGCTCAGTAGTCTCCGGTGGAAGCCTGGTGCCGGCGGACGGATCTTGGGCTCCGGTGACTATGATGGGGTT
GTCATGGAGTATGATCTTGAAAAGAAAGTCCCGGTTTTTGAACGGGATGAACACGGCGGACGGCGCGTGTGGAGTTTGGATTACTCTACGGTGGATCCAATGGTGGGCGC
GTCGGGGTCGGATGATGGTACGGTGCAAGTATGGGACACGCGCTGTGACGGTGTGGATTGTGTGGCGGTGGTGCAGCCGAGTGTGGTACGGAGTCCGGTTTGTTGCGTGG
AGTTTAATCCCTACGGCGGCGCGTTGGTGGTAGTCGGGTGTGCAGACAGGAAAGCGTATGGGTACGACCGGCGGAAAATGACGGAGGCGGTCATGGTGTTTGAGGGGCAC
GCGAAAACGGTGACGTATGTGAAGTTCGTGGACGGGGGGACGATAGTGTCTGCGAGTACGGATGGGAGTTTGAAGATGTGGAAGGCGGAGGAGGGGGGAGATGGGGGTGG
AGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTCGTCGGGTTATCGGTGTGGAGGAATGGGGGTTTAATCGGGTGCGGGTCGGAGGACAAGA
GGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATGAATCCACGCCGCTCCGTCGCGAATGGACCTTCTCCCTCGCCTCCGTCGTCTCCTCCTCCTCCCTCATTGGCCCCGCTTCCGACACTCTCGGCGTCGTCGA
ATTCGACCCTTCTGATTCCCTCATCGCCACCGCCGGAATCGCTAGAAAAATCCGTGGCTACTCTCTTTCTAATCTCTTGCCGCATGACGGTACTGTTGCTATGTTGGACC
ACAGTCGTGCTTCTGAATTTTGTATCTGTACTCCGGCCAAGCTCAGTAGTCTCCGGTGGAAGCCTGGTGCCGGCGGACGGATCTTGGGCTCCGGTGACTATGATGGGGTT
GTCATGGAGTATGATCTTGAAAAGAAAGTCCCGGTTTTTGAACGGGATGAACACGGCGGACGGCGCGTGTGGAGTTTGGATTACTCTACGGTGGATCCAATGGTGGGCGC
GTCGGGGTCGGATGATGGTACGGTGCAAGTATGGGACACGCGCTGTGACGGTGTGGATTGTGTGGCGGTGGTGCAGCCGAGTGTGGTACGGAGTCCGGTTTGTTGCGTGG
AGTTTAATCCCTACGGCGGCGCGTTGGTGGTAGTCGGGTGTGCAGACAGGAAAGCGTATGGGTACGACCGGCGGAAAATGACGGAGGCGGTCATGGTGTTTGAGGGGCAC
GCGAAAACGGTGACGTATGTGAAGTTCGTGGACGGGGGGACGATAGTGTCTGCGAGTACGGATGGGAGTTTGAAGATGTGGAAGGCGGAGGAGGGGGGAGATGGGGGTGG
AGGTGCACGTGTGGTGCGCACGTACGAGGGGCACGTGAATGGGAGGAGCTTCGTCGGGTTATCGGTGTGGAGGAATGGGGGTTTAATCGGGTGCGGGTCGGAGGACAAGA
GGAACTGA
Protein sequenceShow/hide protein sequence
MGNESTPLRREWTFSLASVVSSSSLIGPASDTLGVVEFDPSDSLIATAGIARKIRGYSLSNLLPHDGTVAMLDHSRASEFCICTPAKLSSLRWKPGAGGRILGSGDYDGV
VMEYDLEKKVPVFERDEHGGRRVWSLDYSTVDPMVGASGSDDGTVQVWDTRCDGVDCVAVVQPSVVRSPVCCVEFNPYGGALVVVGCADRKAYGYDRRKMTEAVMVFEGH
AKTVTYVKFVDGGTIVSASTDGSLKMWKAEEGGDGGGGARVVRTYEGHVNGRSFVGLSVWRNGGLIGCGSEDKRN