; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G004360 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G004360
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCCHC-type domain-containing protein
Genome locationCmo_Chr19:5298415..5301195
RNA-Seq ExpressionCmoCh19G004360
SyntenyCmoCh19G004360
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930088.1 uncharacterized protein LOC111436574 [Cucurbita moschata]1.5e-4559.3Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MKD E+I+DF+MKLTT  S I SLGDVVEEI +VKKFL AI PRFMQIVTSIEQF +L NM +EE++ RLKVHEERLR YEDKEE K L LTHEEW+A  
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEEANLIFSDDEEPTLMLVEKM
        KKKDA DSS S MS   S  KEKR  G GR  GG+G                                   C NKE DEEANL+FSDDE+PTLML EKM
Subjt:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEEANLIFSDDEEPTLMLVEKM

XP_022955160.1 inositol transporter 4-like isoform X2 [Cucurbita moschata]8.4e-3665.49Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L NM +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A T
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG
        KK D  DS FS      SHN E       RGHGRGR  GG+G
Subjt:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG

XP_022955161.1 inositol transporter 4-like isoform X3 [Cucurbita moschata]8.4e-3665.49Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L NM +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A T
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG
        KK D  DS FS      SHN E       RGHGRGR  GG+G
Subjt:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG

XP_023007609.1 glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]1.9e-4055.33Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MKD E+I+ F MKLT   S +CSL  VVEE  +VKKFLRA+ PRFMQIV SIEQF +L NM +E+ I  LKVHEERLRGYE+KE+EK L LTHEEW+A T
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRRKSVF-KTLWDRRCVAGI
        KKKDA    F     H   +K         + G   V CHN   DEEANL+  DD+EPTLML EK+ N+L+LNEEKV +  S+  K  W   C  G+
Subjt:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRRKSVF-KTLWDRRCVAGI

XP_023523513.1 uncharacterized protein LOC111787714 [Cucurbita pepo subsp. pepo]7.8e-4250.73Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MKD ++I++FSMKL T  S ICSL + +EEI +VKKFLR + PR M   TSIE+F NL NM +E++I RLK HEERL GY+DKEEEK+L LTHEEW+ W 
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEEANLIFSDDEEPTLMLVEKMP
        KKKD  DSS SG + H  HNKE +GH RGR  GG G                                 + C  K+ DEEANL  + D+EPTL+L +KM 
Subjt:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEEANLIFSDDEEPTLMLVEKMP

Query:  NMLML
        N+LML
Subjt:  NMLML

TrEMBL top hitse value%identityAlignment
A0A6J1EU16 uncharacterized protein LOC1114365747.4e-4659.3Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MKD E+I+DF+MKLTT  S I SLGDVVEEI +VKKFL AI PRFMQIVTSIEQF +L NM +EE++ RLKVHEERLR YEDKEE K L LTHEEW+A  
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEEANLIFSDDEEPTLMLVEKM
        KKKDA DSS S MS   S  KEKR  G GR  GG+G                                   C NKE DEEANL+FSDDE+PTLML EKM
Subjt:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKG---------------------------------VVCHNKESDEEANLIFSDDEEPTLMLVEKM

A0A6J1GT03 inositol transporter 4-like isoform X34.1e-3665.49Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L NM +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A T
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG
        KK D  DS FS      SHN E       RGHGRGR  GG+G
Subjt:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG

A0A6J1GUE5 inositol transporter 4-like isoform X24.1e-3665.49Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MK+ E+I+DFSMKLT   S I S+GD+VEEI +VKKFLRA+  RFMQIVTSIEQF +L NM +EE++ RLKVHEERLRGYEDKEEEK+L LTHEEW+A T
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG
        KK D  DS FS      SHN E       RGHGRGR  GG+G
Subjt:  KKKDANDSSFSGMSRHGSHNKE------KRGHGRGRRDGGKG

A0A6J1L5F9 glycine-rich cell wall structural protein 1.0-like9.3e-4155.33Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MKD E+I+ F MKLT   S +CSL  VVEE  +VKKFLRA+ PRFMQIV SIEQF +L NM +E+ I  LKVHEERLRGYE+KE+EK L LTHEEW+A T
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRRKSVF-KTLWDRRCVAGI
        KKKDA    F     H   +K         + G   V CHN   DEEANL+  DD+EPTLML EK+ N+L+LNEEKV +  S+  K  W   C  G+
Subjt:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRRKSVF-KTLWDRRCVAGI

A0A6L2JF84 Zinc finger, CCHC-type2.5e-2546.11Show/hide
Query:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT
        MKD E++++F+M+L T  + I SLGD +EEI +VKKFLRA+  RFMQIVTSIEQF +L NM +EE++ RLK HEERLRGY D + E+ L LTH EW++ +
Subjt:  MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWT

Query:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLM---LVEKMPNMLMLNEEKV
        K+    DSS                 GRG                 E NL  + D EPTLM   L E     + LNEEKV
Subjt:  KKKDANDSSFSGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLM---LVEKMPNMLMLNEEKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGACGATGAGGCAATAGAAGACTTTTCCATGAAGTTGACGACGACCTTTAGCAGCATCTGTTCACTAGGCGACGTTGTGGAGGAGATTTGCATTGTCAAGAAGTT
TCTCCGAGCTATTACCCCAAGATTCATGCAGATTGTCACCTCCATCGAGCAGTTCTGCAACCTAATAAACATGTTGATTGAGGAGATCATTGTTCGTCTTAAGGTTCATG
AGGAGAGACTTCGTGGCTACGAAGACAAAGAGGAGGAGAAAAACCTCTCACTCACACATGAGGAGTGGGTCGCATGGACGAAAAAGAAAGATGCAAATGACTCTTCTTTT
TCAGGTATGAGCAGACATGGCAGCCATAACAAAGAAAAAAGAGGTCATGGACGTGGCCGCAGAGATGGAGGCAAAGGAGTAGTGTGCCACAACAAGGAGAGTGATGAGGA
GGCAAATCTTATCTTCTCAGATGATGAAGAGCCCACATTGATGTTGGTTGAGAAAATGCCCAACATGTTGATGCTCAATGAGGAGAAGGTTGACCGTCGAAAATCGGTGT
TCAAGACGTTGTGGGATCGTCGGTGCGTCGCCGGAATCGGGGAGGTGGAAATTAGGGTTTCGACTTGTCGGGTAAGGAAGGCGAGGTTTTTGGAATCGGGTCGAGCCGCA
GATGGACGCTCAACAGCTCCAGCTGCTTCGCACACGTACACAGTGCGCCTCGCCTCGCATGTGTATGAAATCGGTTCGGTTCCGTCAATTCTCGCAACTCGACTTGGCGG
CTTAGTTGGTCGGCTCGGTAGCTCGGCTTGGCAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGACGATGAGGCAATAGAAGACTTTTCCATGAAGTTGACGACGACCTTTAGCAGCATCTGTTCACTAGGCGACGTTGTGGAGGAGATTTGCATTGTCAAGAAGTT
TCTCCGAGCTATTACCCCAAGATTCATGCAGATTGTCACCTCCATCGAGCAGTTCTGCAACCTAATAAACATGTTGATTGAGGAGATCATTGTTCGTCTTAAGGTTCATG
AGGAGAGACTTCGTGGCTACGAAGACAAAGAGGAGGAGAAAAACCTCTCACTCACACATGAGGAGTGGGTCGCATGGACGAAAAAGAAAGATGCAAATGACTCTTCTTTT
TCAGGTATGAGCAGACATGGCAGCCATAACAAAGAAAAAAGAGGTCATGGACGTGGCCGCAGAGATGGAGGCAAAGGAGTAGTGTGCCACAACAAGGAGAGTGATGAGGA
GGCAAATCTTATCTTCTCAGATGATGAAGAGCCCACATTGATGTTGGTTGAGAAAATGCCCAACATGTTGATGCTCAATGAGGAGAAGGTTGACCGTCGAAAATCGGTGT
TCAAGACGTTGTGGGATCGTCGGTGCGTCGCCGGAATCGGGGAGGTGGAAATTAGGGTTTCGACTTGTCGGGTAAGGAAGGCGAGGTTTTTGGAATCGGGTCGAGCCGCA
GATGGACGCTCAACAGCTCCAGCTGCTTCGCACACGTACACAGTGCGCCTCGCCTCGCATGTGTATGAAATCGGTTCGGTTCCGTCAATTCTCGCAACTCGACTTGGCGG
CTTAGTTGGTCGGCTCGGTAGCTCGGCTTGGCAGCTTTGATGGAGAAGACCAAGTGGAGAGCAGCATTGGTACCTAGACAACGGAGCAAGTAACCACATGACCGGAGATC
GAGAAAAGTTTAAGGACCTCTATGAGAAGTTCACTGAAAACGTGAACCTTTGCGACAGATCAATTGTACCGATCTAA
Protein sequenceShow/hide protein sequence
MKDDEAIEDFSMKLTTTFSSICSLGDVVEEICIVKKFLRAITPRFMQIVTSIEQFCNLINMLIEEIIVRLKVHEERLRGYEDKEEEKNLSLTHEEWVAWTKKKDANDSSF
SGMSRHGSHNKEKRGHGRGRRDGGKGVVCHNKESDEEANLIFSDDEEPTLMLVEKMPNMLMLNEEKVDRRKSVFKTLWDRRCVAGIGEVEIRVSTCRVRKARFLESGRAA
DGRSTAPAASHTYTVRLASHVYEIGSVPSILATRLGGLVGRLGSSAWQL