; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G005200 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G005200
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionMajor facilitator superfamily protein
Genome locationCmo_Chr19:6111332..6113264
RNA-Seq ExpressionCmoCh19G005200
SyntenyCmoCh19G005200
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571891.1 putative sphingolipid transporter spinster-like 3, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2695.24Show/hide
Query:  CNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLL
        CN HLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN+EHFSHSYR+LL
Subjt:  CNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLL
KAG7011576.1 putative sphingolipid transporter spinster-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1797.92Show/hide
Query:  NCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
        +CNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
Subjt:  NCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVE
KAG7011577.1 putative sphingolipid transporter spinster-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-1548.54Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSRIFL------FDDVEEKDLQRSSAKPSF
        P+NFVCLHCVTP+LRPLSM+MST+AI IFGDVPSS LVGV+EDH N              + ++I+ T FF    +      FDDV  +D+Q+ +   S 
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSRIFL------FDDVEEKDLQRSSAKPSF

Query:  ENK
         N+
Subjt:  ENK
XP_022953038.1 probable sphingolipid transporter spinster homolog 2 [Cucurbita moschata]7.6e-1548.54Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSRIFL------FDDVEEKDLQRSSAKPSF
        P+NFVCLHCVTP+LRPLSM+MST+AI IFGDVPSS LVGV+EDH N              + ++I+ T FF    +      FDDV  +D+Q+ +   S 
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSRIFL------FDDVEEKDLQRSSAKPSF

Query:  ENK
         N+
Subjt:  ENK
XP_023511602.1 probable sphingolipid transporter spinster homolog 2 [Cucurbita pepo subsp. pepo]1.9e-1384.78Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NFVCLHCVTPSLRPLSM+MST+AI IFGDVPSS LVGV+EDH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
TrEMBL top hitse value%identityAlignment
A0A6J1GM96 probable sphingolipid transporter spinster homolog 23.7e-1548.54Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSRIFL------FDDVEEKDLQRSSAKPSF
        P+NFVCLHCVTP+LRPLSM+MST+AI IFGDVPSS LVGV+EDH N              + ++I+ T FF    +      FDDV  +D+Q+ +   S 
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSRIFL------FDDVEEKDLQRSSAKPSF

Query:  ENK
         N+
Subjt:  ENK
A0A6J1I345 probable sphingolipid transporter spinster homolog 24.5e-1382.61Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+EDH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
A0A6J1I4D9 probable sphingolipid transporter spinster homolog 24.5e-1382.61Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+EDH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
A0A6J1I757 probable sphingolipid transporter spinster homolog 24.5e-1382.61Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+EDH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
A0A6J1I9V4 probable sphingolipid transporter spinster homolog 24.5e-1382.61Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NFVCLHCV PSLRPLSM+MST+AI IFGDVPSS LVGV+EDH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
SwissProt top hitse value%identityAlignment
F4IKF6 Probable sphingolipid transporter spinster homolog 31.0e-1476.09Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+N+VCLHCV PSLRPLSM++ST+AI IFGDVPSS LVG+V+DH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
Q6NMN6 Probable sphingolipid transporter spinster homolog 15.3e-1168.18Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDH
        P+NFVCLHCV P+LRPLSM+ ST+ I I GDVPSS L G ++DH
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDH
Q9FLG8 Probable sphingolipid transporter spinster homolog 21.6e-1269.57Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NF+ LHCV PSLRPL+M+MST++I IFGDVPSS LVGV++D+ N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
Arabidopsis top hitse value%identityAlignment
AT2G22730.1 Major facilitator superfamily protein7.3e-1676.09Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+N+VCLHCV PSLRPLSM++ST+AI IFGDVPSS LVG+V+DH N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
AT5G64500.1 Major facilitator superfamily protein1.2e-1369.57Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
        P+NF+ LHCV PSLRPL+M+MST++I IFGDVPSS LVGV++D+ N
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFN
AT5G65687.1 Major facilitator superfamily protein3.7e-1268.18Show/hide
Query:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDH
        P+NFVCLHCV P+LRPLSM+ ST+ I I GDVPSS L G ++DH
Subjt:  PINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDH

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGAGGTCAATGCTGCCATTGCGAGCATGAATTGGATTCAGAAAAGTTGTCGTGTTGATGATACATGCACATTTGGTTCTGGAATAAATTGCAATTCACATCT
CCCGATAAACTTCGTGTGCCTACATTGCGTGACGCCTAGTCTAAGGCCGCTTTCTATGTCTATGTCCACAATTGCAATTCAGATTTTTGGAGATGTGCCATCTTCGAATC
TTGTTGGAGTTGTCGAAGACCATTTTAACCGGGAACACTTCTCTCATTCCTACCGGATGCTATTAAGAGAAGAAAGGTCAATAATTATTATGACACGTTTTTTCTCAAGA
ATATTTCTTTTTGACGATGTAGAGGAAAAGGATTTGCAACGATCGAGTGCAAAACCTTCATTTGAAAACAAAGAAATTATCACAAACAAACTGAGGTTTGCAAAAGTTTA
G
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAGAGGTCAATGCTGCCATTGCGAGCATGAATTGGATTCAGAAAAGTTGTCGTGTTGATGATACATGCACATTTGGTTCTGGAATAAATTGCAATTCACATCT
CCCGATAAACTTCGTGTGCCTACATTGCGTGACGCCTAGTCTAAGGCCGCTTTCTATGTCTATGTCCACAATTGCAATTCAGATTTTTGGAGATGTGCCATCTTCGAATC
TTGTTGGAGTTGTCGAAGACCATTTTAACCGGGAACACTTCTCTCATTCCTACCGGATGCTATTAAGAGAAGAAAGGTCAATAATTATTATGACACGTTTTTTCTCAAGA
ATATTTCTTTTTGACGATGTAGAGGAAAAGGATTTGCAACGATCGAGTGCAAAACCTTCATTTGAAAACAAAGAAATTATCACAAACAAACTGAGGTTTGCAAAAGTTTA
G
Protein sequenceShow/hide protein sequence
MDREVNAAIASMNWIQKSCRVDDTCTFGSGINCNSHLPINFVCLHCVTPSLRPLSMSMSTIAIQIFGDVPSSNLVGVVEDHFNREHFSHSYRMLLREERSIIIMTRFFSR
IFLFDDVEEKDLQRSSAKPSFENKEIITNKLRFAKV