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CmoCh19G005370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G005370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionbasic form of pathogenesis-related protein 1-like
Genome locationCmo_Chr19:6252585..6252854
RNA-Seq ExpressionCmoCh19G005370
SyntenyCmoCh19G005370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022972405.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]5.0e-1663.86Show/hide
Query:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASPIWLV LALILASISPTVAKSY KDFVDAHNVIR                           NC+LEYSNGPYGENLAEAY
Subjt:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

XP_022972465.1 basic form of pathogenesis-related protein 1-like [Cucurbita maxima]4.8e-1153.01Show/hide
Query:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASPIW V LALILASISPTVAKS  K+FVDAHN +R                            CE+ YSNGPYGEN+A AY
Subjt:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

XP_023511603.1 basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]4.5e-0949.4Show/hide
Query:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASPIW + LALILASISPTVA+S  K+FVDAHN +R                            CE+ YSNG YGEN+A AY
Subjt:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

XP_023511606.1 basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]5.0e-1663.86Show/hide
Query:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASPIWLV LALILASISPTVAKSY KDFVDAHNVIR                           NCE EYSNGPYGENLAEAY
Subjt:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

XP_023511684.1 basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo]1.0e-0848.15Show/hide
Query:  SPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        S  W+V +ALILA ISPT+AKS  KDFVDAHN IR                            CELE+S+GPY EN+AEAY
Subjt:  SPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

TrEMBL top hitse value%identityAlignment
A0A6J1GM34 basic form of pathogenesis-related protein 1-like7.0e-0846.15Show/hide
Query:  WLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        W+V + LILA ISPT+A+S  KDFVDAHN IR                            CELE+S+GPY EN+AEAY
Subjt:  WLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

A0A6J1GMW8 basic form of pathogenesis-related protein 1-like3.1e-0846.91Show/hide
Query:  SPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        S  W+V +ALIL  ISPT+AKS  KDFVDAHN IR                            CE+E+S GPY ENLAEAY
Subjt:  SPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

A0A6J1I8I8 basic form of pathogenesis-related protein 1-like2.4e-1663.86Show/hide
Query:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASPIWLV LALILASISPTVAKSY KDFVDAHNVIR                           NC+LEYSNGPYGENLAEAY
Subjt:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

A0A6J1I8P9 basic form of pathogenesis-related protein 1-like2.3e-1153.01Show/hide
Query:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASPIW V LALILASISPTVAKS  K+FVDAHN +R                            CE+ YSNGPYGEN+A AY
Subjt:  MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

A0A6J1IBM6 basic form of pathogenesis-related protein 1-like1.1e-0846.59Show/hide
Query:  MASP-----IWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY
        MASP      W+V + LILA ISPT+A+S  KDFVDAHN IR                            CELE+SNGPY EN+AEAY
Subjt:  MASP-----IWLVELALILASISPTVAKSYTKDFVDAHNVIR---------------------------NCELEYSNGPYGENLAEAY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTCCAATTTGGTTAGTAGAACTTGCCCTAATCTTAGCTTCGATCTCTCCCACGGTTGCTAAAAGCTACACGAAAGACTTCGTCGATGCCCACAATGTCATCCG
TAACTGCGAGTTGGAGTACTCTAATGGCCCTTATGGCGAAAACTTGGCAGAAGCATACATAATACAACAGCAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTCCAATTTGGTTAGTAGAACTTGCCCTAATCTTAGCTTCGATCTCTCCCACGGTTGCTAAAAGCTACACGAAAGACTTCGTCGATGCCCACAATGTCATCCG
TAACTGCGAGTTGGAGTACTCTAATGGCCCTTATGGCGAAAACTTGGCAGAAGCATACATAATACAACAGCAAAATTGA
Protein sequenceShow/hide protein sequence
MASPIWLVELALILASISPTVAKSYTKDFVDAHNVIRNCELEYSNGPYGENLAEAYIIQQQN