; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G005550 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G005550
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description16S rRNA (uracil(1498)-N(3))-methyltransferase
Genome locationCmo_Chr19:6393515..6399411
RNA-Seq ExpressionCmoCh19G005550
SyntenyCmoCh19G005550
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0032259 - methylation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR006700 - Ribosomal RNA small subunit methyltransferase E
IPR015947 - PUA-like superfamily
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571912.1 hypothetical protein SDJN03_28640, partial [Cucurbita argyrosperma subsp. sororia]3.9e-16596.54Show/hide
Query:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
        MLVQCWKLESVTPAAILMFHS  SLQMRTIG IRPQLTELFNRSCFRSF VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
Subjt:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR

Query:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
        LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
Subjt:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL

Query:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGLEVLIVNLSFRISSRSA
        AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEA       EVLIVNLSFRISSRSA
Subjt:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGLEVLIVNLSFRISSRSA

Query:  PFLSLKVGAFEARGMSTI
        PFLSLKVGAFEARGMSTI
Subjt:  PFLSLKVGAFEARGMSTI

KAG7011595.1 rsmE, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-13682.72Show/hide
Query:  QCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKT
        QCWKLESVTPAAILMFHS  SLQMRTIG IRPQLTELFNRSCFRSF VRALSSSSLASSNQSRGGLPRFFSQ                            
Subjt:  QCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKT

Query:  DDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAAT
             LFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAAT
Subjt:  DDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAAT

Query:  KQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL---------EVLIVNLSFR
        KQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL           + +  +  
Subjt:  KQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL---------EVLIVNLSFR

Query:  ISSRSAPFLSLKVGAFEARGMSTI
        ISSRSAPFLSLKVGAFEARGMSTI
Subjt:  ISSRSAPFLSLKVGAFEARGMSTI

XP_022952195.1 uncharacterized protein LOC111454941 [Cucurbita moschata]9.6e-156100Show/hide
Query:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
        MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
Subjt:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR

Query:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
        LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
Subjt:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL

Query:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
Subjt:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

XP_022972429.1 uncharacterized protein LOC111470992 [Cucurbita maxima]2.1e-15096.83Show/hide
Query:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
        MLVQ WKLESVTPAAILMFHS SSLQMRTIGAIRPQLTELF+RSCFRSF VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGD+IRLEGDEVWHMTKVLR
Subjt:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR

Query:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
        LKTDDRVELFNGNGGLVEGSIKN+RVNG+DILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
Subjt:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL

Query:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNM+KEAGAI VGL
Subjt:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

XP_023553831.1 uncharacterized protein LOC111811289 isoform X1 [Cucurbita pepo subsp. pepo]3.4e-15398.94Show/hide
Query:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
        MLVQCWKLESVTPAAILMFHS SSLQMRTIGAIRPQLTELFNRSCFRSF VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
Subjt:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR

Query:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
        LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
Subjt:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL

Query:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        AATKQCQRLHQMSLNSPLKI GLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
Subjt:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

TrEMBL top hitse value%identityAlignment
A0A1S3BZZ7 16S rRNA (uracil(1498)-N(3))-methyltransferase3.7e-12989.89Show/hide
Query:  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHS    QMRTIGA RPQLT+L   S  RSF VRALSSSSL SSNQSRGGLPRFFSQVLPS+KGDVIRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLV
Subjt:  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSP
        EGSIKNVRVNGLDILAME+PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFERITLAATKQCQRLHQM+LNSP
Subjt:  EGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSP

Query:  LKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        LKIDGLL +INE+KLSFVAVAEATPLVSALAS + ESGGLLV+GPEGDFTEKEV+MMKEAGAI VGL
Subjt:  LKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

A0A5A7SPG3 16S rRNA (uracil(1498)-N(3))-methyltransferase4.7e-12488.01Show/hide
Query:  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV
        MFHS    QMRTIGA RPQLT+L   S  RSF VRALSSSSL SSNQSRGGLPRFFSQ      GDVIRLEGDEVWHMTKVLRLKT+DRVELFNGNGGLV
Subjt:  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLV

Query:  EGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSP
        EGSIKNVRVNGLDILAME+PKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC TISDNRVHRFERITLAATKQCQRLHQM+LNSP
Subjt:  EGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSP

Query:  LKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        LKIDGLL +INE+KLSFVAVAEATPLVSALAS + ESGGLLV+GPEGDFTEKEV+MMKEAGAI VGL
Subjt:  LKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

A0A6J1D666 16S rRNA (uracil(1498)-N(3))-methyltransferase9.1e-12888.81Show/hide
Query:  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSS-SLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGL
        M H  SS QMRTIGAIRPQL++L +RS FRSF VRALSSS S ASSNQ+RGGLPRFFSQVLPSYKGDV+RLEGDEVWHMTKVLRLKTDDRVELFNGNGGL
Subjt:  MFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSS-SLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGL

Query:  VEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNS
        VEGSIK + VNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPL+TERC TISDNRV+RFERITLAATKQCQRLH+M+LNS
Subjt:  VEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNS

Query:  PLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        PLKI GLLH+INESKL FVAVAEATPLVSALAS E ESGGLLVVGPEGDFTEKE+ MMKEAGAI VGL
Subjt:  PLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

A0A6J1GL34 16S rRNA (uracil(1498)-N(3))-methyltransferase4.6e-156100Show/hide
Query:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
        MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
Subjt:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR

Query:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
        LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
Subjt:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL

Query:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
Subjt:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

A0A6J1IBI6 16S rRNA (uracil(1498)-N(3))-methyltransferase1.0e-15096.83Show/hide
Query:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR
        MLVQ WKLESVTPAAILMFHS SSLQMRTIGAIRPQLTELF+RSCFRSF VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGD+IRLEGDEVWHMTKVLR
Subjt:  MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLR

Query:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
        LKTDDRVELFNGNGGLVEGSIKN+RVNG+DILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL
Subjt:  LKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITL

Query:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNM+KEAGAI VGL
Subjt:  AATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

SwissProt top hitse value%identityAlignment
P37995 Ribosomal RNA small subunit methyltransferase E2.4e-0828Show/hide
Query:  LPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSI-----KNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADW
        +PR F     + +G    L  D   H+ +VLR+     ++LF+G+  + +  I     KNVRV        E+ +S L      H+       +G + ++
Subjt:  LPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSI-----KNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADW

Query:  LVEKCTELGASSVTPLLTERCATISD-----NRVHRFERITLAATKQCQR
         ++K  ELG + +TPLL+ERC    D      ++ ++++I +AA +QC R
Subjt:  LVEKCTELGASSVTPLLTERCATISD-----NRVHRFERITLAATKQCQR

P54461 Ribosomal RNA small subunit methyltransferase E9.7e-1024.79Show/hide
Query:  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAME--DPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC
        + G+EV H+  V+R+   D++   + +G   +  +++V  + +  L +E  +    LP      V+ A G  KG + +W+++K TELGA +  P    R 
Subjt:  LEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAME--DPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERC

Query:  ATISDNRV-----HRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPL--VSALASIETE----SGGLLVVGPEGDFTEKEVNM
            D++       R+ +I   A +Q  R     +        LL  + +     VA  E++    +SA ++I +     S  L+V GPEG  TE EV  
Subjt:  ATISDNRV-----HRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPL--VSALASIETE----SGGLLVVGPEGDFTEKEVNM

Query:  MKEAGAIPVGLEVLIVNLSFRISSRSAPFLSLKVGAFE
        + E   +  GL   I      + + +AP  +L   +++
Subjt:  MKEAGAIPVGLEVLIVNLSFRISSRSAPFLSLKVGAFE

P72667 Ribosomal RNA small subunit methyltransferase E2.3e-1126.47Show/hide
Query:  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER-
        + L   ++ ++ +VLRL+  D   + +G GG+    + ++      +L     ++ LP      V  A    KG   + ++  CTELGA++  PLLTER 
Subjt:  IRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER-

Query:  CATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLH-IINESKLSFVAVAEA-TPLVSA-LASIETESGGLLVVGPEGDFTEKEVNMMKEAGAI
            S N++ R++RI   A +Q +R     + +PL     +  +     L+ + V    +P++ A L      +  +L  GPEG +T+ E+++    G  
Subjt:  CATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLH-IINESKLSFVAVAEA-TPLVSA-LASIETESGGLLVVGPEGDFTEKEVNMMKEAGAI

Query:  PVGL
        PV L
Subjt:  PVGL

Q8K9E4 Ribosomal RNA small subunit methyltransferase E1.3e-0923.64Show/hide
Query:  RFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTE
        ++F Q+       VI L      ++ KVLR+K  D++E+FN    +    I  +  + ++I+ ++     L      H+       K  + ++ ++K  E
Subjt:  RFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTE

Query:  LGASSVTPLLTERC------ATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEG
        LG +++TPL +E C            ++H +E I +++ +QC R +   + +P  I        E++   V    AT  ++ L   E  +   L++G EG
Subjt:  LGASSVTPLLTERC------ATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEG

Query:  DFTEKEVNMMKEAGAIPVGL
         F+  E+  + + G IP+ L
Subjt:  DFTEKEVNMMKEAGAIPVGL

Q92J59 Ribosomal RNA small subunit methyltransferase E4.7e-1228.02Show/hide
Query:  IRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER
        I L  D   H  K VLRLK +D + LFNG  G     I ++  N L +   E  K    +ST   +  A   +K  +    +   T+LG + + PL+T  
Subjt:  IRLEGDEVWHMTK-VLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTER

Query:  CATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMM---KEAGAI
        C   S N + R  +  + AT+Q +RL    +   + I   L   N   L      +    +  ++S  + S   ++VGPEG FT  E+ ++   K   +I
Subjt:  CATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMM---KEAGAI

Query:  PVGLEVL
         +G  +L
Subjt:  PVGLEVL

Arabidopsis top hitse value%identityAlignment
AT1G50000.1 methyltransferases6.8e-8365.29Show/hide
Query:  SCFRSFG-VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLP
        S F+SF  V +   S L   NQSRGGLPRFFS  LPS KG V+R++G E WHM KVLRLK +DRVELFNG GGLVEG I+++   G+D +A ED K +LP
Subjt:  SCFRSFG-VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLP

Query:  QSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATP
        Q  QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER   IS+NRV R ER++ AA KQCQRLHQM LN P+K   LL  I +SKL  VA AEA P
Subjt:  QSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLLHIINESKLSFVAVAEATP

Query:  LVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL
        L++A+ S   ES GLL+VGPEGDFT+KEV MM EAG   VGL
Subjt:  LVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGL

AT1G50000.2 methyltransferases5.4e-6466.48Show/hide
Query:  SCFRSFG-VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLP
        S F+SF  V +   S L   NQSRGGLPRFFS  LPS KG V+R++G E WHM KVLRLK +DRVELFNG GGLVEG I+++   G+D +A ED K +LP
Subjt:  SCFRSFG-VRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELFNGNGGLVEGSIKNVRVNGLDILAMEDPKSVLP

Query:  QSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLL
        Q  QW VFAA GTLKGGRADWL+EKCTELGASSVTPLLTER   IS+NRV R ER++ AA KQCQRLHQM LN P+K   LL
Subjt:  QSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKIDGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTGTTCAGTGTTGGAAGCTTGAAAGCGTCACACCAGCGGCAATCCTCATGTTCCATAGTTCTTCTTCTTTGCAAATGCGAACTATTGGGGCAATACGACCTCAATT
GACGGAGTTATTCAACCGTTCGTGTTTCAGAAGCTTCGGAGTTAGAGCTCTCTCGTCTTCATCTCTGGCCTCCTCGAATCAATCCCGCGGTGGTCTTCCTCGCTTCTTCT
CCCAAGTTCTTCCTTCTTATAAGGGTGATGTTATTCGTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTGAGGTTGAAGACTGATGATAGGGTGGAGCTGTTC
AATGGAAATGGAGGTTTAGTTGAAGGGAGCATAAAGAACGTTCGTGTCAACGGACTCGACATTCTGGCAATGGAAGATCCAAAATCTGTTCTACCTCAAAGCACACAGTG
GCATGTATTTGCAGCTTGTGGTACTCTAAAGGGCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACAGAACTGGGTGCCAGTAGCGTAACTCCACTGCTAACAGAACGTT
GCGCTACCATATCTGATAACCGGGTACACAGATTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTGCACCAAATGAGTCTGAATTCTCCATTGAAGATT
GATGGTCTTTTGCACATAATTAATGAGTCGAAGCTATCTTTTGTAGCAGTTGCAGAAGCAACCCCGCTTGTAAGTGCATTAGCTTCAATTGAAACCGAGTCTGGTGGGCT
TTTGGTCGTCGGACCTGAAGGAGACTTCACCGAAAAAGAGGTCAATATGATGAAAGAAGCAGGTGCAATTCCAGTTGGTCTTGAAGTTCTAATCGTTAATCTCTCTTTCA
GGATATCATCAAGATCAGCACCATTTCTAAGCCTCAAAGTCGGAGCGTTTGAGGCACGAGGCATGTCGACAATTTGA
mRNA sequenceShow/hide mRNA sequence
CATTGCTTTAAAACCGTCTCCAAACCATTTTCTCGCTCACCTTTTATACAAATATTTTTATGTCAAACATGATTTAAGGTTCGAACCCAGGTCAAGTGGCATCATACTTT
TAACTATAAGATCCCTTCCCTACTTCCAGCGAGAGCCTTTTACCGTTTTCAGAGTGGCCAAGCGGAGCTGAGAATTCCATGCTTGTTCAGTGTTGGAAGCTTGAAAGCGT
CACACCAGCGGCAATCCTCATGTTCCATAGTTCTTCTTCTTTGCAAATGCGAACTATTGGGGCAATACGACCTCAATTGACGGAGTTATTCAACCGTTCGTGTTTCAGAA
GCTTCGGAGTTAGAGCTCTCTCGTCTTCATCTCTGGCCTCCTCGAATCAATCCCGCGGTGGTCTTCCTCGCTTCTTCTCCCAAGTTCTTCCTTCTTATAAGGGTGATGTT
ATTCGTCTAGAAGGCGATGAAGTCTGGCATATGACTAAAGTTTTGAGGTTGAAGACTGATGATAGGGTGGAGCTGTTCAATGGAAATGGAGGTTTAGTTGAAGGGAGCAT
AAAGAACGTTCGTGTCAACGGACTCGACATTCTGGCAATGGAAGATCCAAAATCTGTTCTACCTCAAAGCACACAGTGGCATGTATTTGCAGCTTGTGGTACTCTAAAGG
GCGGTCGTGCTGATTGGCTTGTTGAGAAATGTACAGAACTGGGTGCCAGTAGCGTAACTCCACTGCTAACAGAACGTTGCGCTACCATATCTGATAACCGGGTACACAGA
TTTGAACGTATCACATTGGCAGCAACTAAACAATGTCAAAGACTGCACCAAATGAGTCTGAATTCTCCATTGAAGATTGATGGTCTTTTGCACATAATTAATGAGTCGAA
GCTATCTTTTGTAGCAGTTGCAGAAGCAACCCCGCTTGTAAGTGCATTAGCTTCAATTGAAACCGAGTCTGGTGGGCTTTTGGTCGTCGGACCTGAAGGAGACTTCACCG
AAAAAGAGGTCAATATGATGAAAGAAGCAGGTGCAATTCCAGTTGGTCTTGAAGTTCTAATCGTTAATCTCTCTTTCAGGATATCATCAAGATCAGCACCATTTCTAAGC
CTCAAAGTCGGAGCGTTTGAGGCACGAGGCATGTCGACAATTTGA
Protein sequenceShow/hide protein sequence
MLVQCWKLESVTPAAILMFHSSSSLQMRTIGAIRPQLTELFNRSCFRSFGVRALSSSSLASSNQSRGGLPRFFSQVLPSYKGDVIRLEGDEVWHMTKVLRLKTDDRVELF
NGNGGLVEGSIKNVRVNGLDILAMEDPKSVLPQSTQWHVFAACGTLKGGRADWLVEKCTELGASSVTPLLTERCATISDNRVHRFERITLAATKQCQRLHQMSLNSPLKI
DGLLHIINESKLSFVAVAEATPLVSALASIETESGGLLVVGPEGDFTEKEVNMMKEAGAIPVGLEVLIVNLSFRISSRSAPFLSLKVGAFEARGMSTI