CuGenDBv2

Gene ID	CmoCh19G005960
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	protein TIC 21, chloroplastic
Genome location	Cmo_Chr19:6659482..6664864
RNA-Seq Expression	CmoCh19G005960
Synteny	CmoCh19G005960
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR022051 - Protein of unknown function DUF3611

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571949.1 Protein TIC 21, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

8.0e-150

89.54

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Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
        MQSLLSPVGRGGPFP AAVYTSELHLSCFNRRPFSVRYASN KSP NSLPSFSAIRPPSSFSLLL KNFGTLEHRRGQFCSDT ASSSPISPTVPPNDEA
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA

Query:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
        EKAKLAQ                           VAKRLEKTSRYF+RLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
Subjt:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW

Query:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
        SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
Subjt:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG

Query:  LVFSLELLRSVTLPATESIPIPRIA
        LVFSLELLRSVTLPATESIPIPR+A
Subjt:  LVFSLELLRSVTLPATESIPIPRIA

XP_022952785.1 protein TIC 21, chloroplastic [Cucurbita moschata]

1.4e-154

91.69

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
        MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA

Query:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
        EKAKLAQ                           VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
Subjt:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW

Query:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
        SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
Subjt:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG

Query:  LVFSLELLRSVTLPATESIPIPRIA
        LVFSLELLRSVTLPATESIPIPRIA
Subjt:  LVFSLELLRSVTLPATESIPIPRIA

XP_022972396.1 protein TIC 21, chloroplastic [Cucurbita maxima]

1.3e-147

88.62

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
        MQSLLSPVGRGGPFP AAVYTSELHLSCFNRRPFSVRYASNLKSP NSLPSFSAIRPPSSFSLLLLK FG LEHRRGQFCSDT ASSSPISPTVPPNDEA
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA

Query:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
        EKAKLAQ                           VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
Subjt:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW

Query:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
        SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQG  PGNSPVLALDVFLVQASANTILSHFLG
Subjt:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG

Query:  LVFSLELLRSVTLPATESIPIPRIA
        LVFSLELLRSVT+PA ESIPIP+IA
Subjt:  LVFSLELLRSVTLPATESIPIPRIA

XP_023553835.1 protein TIC 21, chloroplastic [Cucurbita pepo subsp. pepo]

2.3e-149

89.54

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Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
        MQSLLSPVGRGGPFP AAVYTSELH SCFNRRPFSVRYASNLKSP NSLPSFSAIRPPSSFSLLLLKNFG+LEHRRGQFCSDT ASSSPISPTVPPNDEA
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA

Query:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
        EKAKLAQ                           VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
Subjt:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW

Query:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
        SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQG SPGNSPVLALDVFLVQASANTILSHFLG
Subjt:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG

Query:  LVFSLELLRSVTLPATESIPIPRIA
        LVFSLELLRSVTLPATESIPIPR+A
Subjt:  LVFSLELLRSVTLPATESIPIPRIA

XP_038888764.1 protein TIC 21, chloroplastic [Benincasa hispida]

2.3e-136

83.13

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Query:  MQSLLSPVGRGGPFP-VAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDE
        MQSLLSPV R GPFP  AAVY+S+LHLS F+RRPFSVR++SNL SPPNSL SF+A+R  SS SLLLLK FGTLEHRRGQF S+T ASSSPISP VPPNDE
Subjt:  MQSLLSPVGRGGPFP-VAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDE

Query:  AEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVF
        A+KAKLAQ                           VAKRLEKTS+YFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKITSPATFYATAGGIVAAFISVF
Subjt:  AEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVF

Query:  WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFL
        WSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFL
Subjt:  WSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFL

Query:  GLVFSLELLRSVTLPATESIPIPRIA
        GLVFSLELLRSVTLPAT+SIPIPRIA
Subjt:  GLVFSLELLRSVTLPATESIPIPRIA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C0L3 protein TIC 21, chloroplastic

3.2e-128

79.58

Show/hide

Query:  MQSLLSPVGRGGPF-PVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAI-------RPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP
        MQSLLSPV R GPF P AAVY+S+ HLS  +RRPFSVR++       NSLP FSAI          SS SLLLLK FGTLEHRRGQ CS+T ASSSPISP
Subjt:  MQSLLSPVGRGGPF-PVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAI-------RPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP

Query:  TVPPNDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIV
        TVPPNDEAEKAKLAQ                           VAKRLEKTSRYFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKI SPATFYATAGGIV
Subjt:  TVPPNDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIV

Query:  AAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASAN
        AAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQASAN
Subjt:  AAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASAN

Query:  TILSHFLGLVFSLELLRSVTLPATESIPIPRIA
        TILSHFLGLVFSLELLRSVTLPAT+SIPIPRIA
Subjt:  TILSHFLGLVFSLELLRSVTLPATESIPIPRIA

A0A5A7SP50 Protein TIC 21

3.2e-128

79.58

Show/hide

Query:  MQSLLSPVGRGGPF-PVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAI-------RPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP
        MQSLLSPV R GPF P AAVY+S+ HLS  +RRPFSVR++       NSLP FSAI          SS SLLLLK FGTLEHRRGQ CS+T ASSSPISP
Subjt:  MQSLLSPVGRGGPF-PVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAI-------RPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP

Query:  TVPPNDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIV
        TVPPNDEAEKAKLAQ                           VAKRLEKTSRYFKRLG+LGFWGQLVCTIVAAVILSFSVV+TGKI SPATFYATAGGIV
Subjt:  TVPPNDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIV

Query:  AAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASAN
        AAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQ ASPGNSPVLALDVFLVQASAN
Subjt:  AAFISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASAN

Query:  TILSHFLGLVFSLELLRSVTLPATESIPIPRIA
        TILSHFLGLVFSLELLRSVTLPAT+SIPIPRIA
Subjt:  TILSHFLGLVFSLELLRSVTLPATESIPIPRIA

A0A6J1D437 protein TIC 21, chloroplastic

2.6e-130

79.7

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIR-----PPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVP
        MQSLLSPV   GP+  AAVY+S+LHLS F+R P S+R+ASNL SPPNS+PS +AIR       SS SLL+LK FGTL +RRG FCS+T ASSSPISPT P
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIR-----PPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVP

Query:  PNDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAF
        PNDEAEKAKLAQ                           VAKRLEKTSRYFKRLGNLGFWGQLVCTIV+AVILSFSVV+TGKITSPATFYATAG IVAAF
Subjt:  PNDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAF

Query:  ISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTIL
        ISVFWSFGYIRLSDKL RTANQPSKAPPRADVVNSL+NGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTIL
Subjt:  ISVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTIL

Query:  SHFLGLVFSLELLRSVTLPATESIPIPRIA
        SHFLGLVFSLELLRSVTLPA ESIPIPRIA
Subjt:  SHFLGLVFSLELLRSVTLPATESIPIPRIA

A0A6J1GMQ4 protein TIC 21, chloroplastic

6.8e-155

91.69

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
        MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA

Query:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
        EKAKLAQ                           VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
Subjt:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW

Query:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
        SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
Subjt:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG

Query:  LVFSLELLRSVTLPATESIPIPRIA
        LVFSLELLRSVTLPATESIPIPRIA
Subjt:  LVFSLELLRSVTLPATESIPIPRIA

A0A6J1I5V5 protein TIC 21, chloroplastic

6.2e-148

88.62

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA
        MQSLLSPVGRGGPFP AAVYTSELHLSCFNRRPFSVRYASNLKSP NSLPSFSAIRPPSSFSLLLLK FG LEHRRGQFCSDT ASSSPISPTVPPNDEA
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEA

Query:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
        EKAKLAQ                           VAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW
Subjt:  EKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFW

Query:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG
        SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQG  PGNSPVLALDVFLVQASANTILSHFLG
Subjt:  SFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLG

Query:  LVFSLELLRSVTLPATESIPIPRIA
        LVFSLELLRSVT+PA ESIPIP+IA
Subjt:  LVFSLELLRSVTLPATESIPIPRIA

SwissProt top hits

e value

%identity

Alignment

Q9SHU7 Protein TIC 21, chloroplastic

3.3e-82

56.23

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVR---YASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP-TVPP
        MQSLL P          A+     H   FN +  S R     + L   P    + S+ + P S S+   +  G+    +  F   T A S P SP +VP 
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVR---YASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP-TVPP

Query:  NDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFI
        ++E +KAKLAQ                           VAKRLEKTSRYFKRLG++GFWGQLV T+VAAVILSFS+VVTGK TSPATFYATA GI AAF+
Subjt:  NDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFI

Query:  SVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILS
        SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG LVAKALT+SA P+YQG S G SPVLALDVFLVQASANT+LS
Subjt:  SVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILS

Query:  HFLGLVFSLELLRSVTLPATESIPIPRIA
        HFLGLV SLELLRSVT+P +ES+ +P++A
Subjt:  HFLGLVFSLELLRSVTLPATESIPIPRIA

Arabidopsis top hits

e value

%identity

Alignment

AT2G15290.1 translocon at inner membrane of chloroplasts 21

2.4e-83

56.23

Show/hide

Query:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVR---YASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP-TVPP
        MQSLL P          A+     H   FN +  S R     + L   P    + S+ + P S S+   +  G+    +  F   T A S P SP +VP 
Subjt:  MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVR---YASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISP-TVPP

Query:  NDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFI
        ++E +KAKLAQ                           VAKRLEKTSRYFKRLG++GFWGQLV T+VAAVILSFS+VVTGK TSPATFYATA GI AAF+
Subjt:  NDEAEKAKLAQIMQLREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFI

Query:  SVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILS
        SVFWSFGYIRLS++L+RT+  P+KAPPRADVV  L++GI+VN+LGMG+A+LGMQATVG LVAKALT+SA P+YQG S G SPVLALDVFLVQASANT+LS
Subjt:  SVFWSFGYIRLSDKLQRTANQPSKAPPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILS

Query:  HFLGLVFSLELLRSVTLPATESIPIPRIA
        HFLGLV SLELLRSVT+P +ES+ +P++A
Subjt:  HFLGLVFSLELLRSVTLPATESIPIPRIA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCAGTCGCTACTCTCGCCGGTCGGTCGCGGCGGTCCATTCCCGGTCGCCGCAGTTTATACATCAGAGTTACACCTCAGCTGTTTCAATCGTCGACCTTTCTCTGTCCG
ATACGCATCCAATCTCAAATCTCCTCCTAATTCCCTCCCTTCATTTAGTGCAATTCGACCTCCTTCTTCTTTTTCGTTGTTGCTTTTGAAGAATTTTGGTACTCTGGAGC
ACAGAAGAGGACAGTTTTGCTCGGATACGTGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTCCCCCAAACGATGAGGCTGAAAAGGCAAAACTGGCTCAGATTATGCAA
TTAAGGGAAAAGAGTTTGCCTGAGAGTTCCACTCCAAATCTGGAGGAAATCGAGGATTATCTTCTTTTTGAGGTGGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAA
GAGGTTGGGTAATCTCGGATTTTGGGGACAGTTGGTGTGCACGATTGTCGCTGCTGTTATTCTTTCATTCTCTGTTGTCGTCACCGGGAAAATTACATCACCTGCCACTT
TTTATGCTACTGCTGGTGGTATTGTGGCAGCTTTCATTTCTGTATTTTGGTCCTTCGGGTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAG
GCTCCTCCCCGAGCCGATGTCGTGAATAGCTTGAAAAATGGAATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACCGTAGGATTGTTAGT
TGCTAAGGCTCTTACTTCCTCAGCAATTCCATATTACCAGGGAGCCTCCCCTGGAAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGCTTCTGCAAACACTA
TTCTCTCTCATTTCCTGGGGCTCGTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTGCCTGCTACTGAGAGTATTCCTATACCCCGAATAGCATAA

mRNA sequence

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CCCCAAAATCCAGAAATTCGCCTTCAGTAACATCCACTGTAGGCTCTCTGCCTGCAGCGCTATCGAAGGTTTATTCGATCATCAATAATGCAGTCGCTACTCTCGCCGGT
CGGTCGCGGCGGTCCATTCCCGGTCGCCGCAGTTTATACATCAGAGTTACACCTCAGCTGTTTCAATCGTCGACCTTTCTCTGTCCGATACGCATCCAATCTCAAATCTC
CTCCTAATTCCCTCCCTTCATTTAGTGCAATTCGACCTCCTTCTTCTTTTTCGTTGTTGCTTTTGAAGAATTTTGGTACTCTGGAGCACAGAAGAGGACAGTTTTGCTCG
GATACGTGCGCTTCTTCTAGTCCCATTTCGCCGACGGTTCCCCCAAACGATGAGGCTGAAAAGGCAAAACTGGCTCAGATTATGCAATTAAGGGAAAAGAGTTTGCCTGA
GAGTTCCACTCCAAATCTGGAGGAAATCGAGGATTATCTTCTTTTTGAGGTGGCAAAGAGATTAGAGAAGACATCGAGGTATTTCAAGAGGTTGGGTAATCTCGGATTTT
GGGGACAGTTGGTGTGCACGATTGTCGCTGCTGTTATTCTTTCATTCTCTGTTGTCGTCACCGGGAAAATTACATCACCTGCCACTTTTTATGCTACTGCTGGTGGTATT
GTGGCAGCTTTCATTTCTGTATTTTGGTCCTTCGGGTACATTCGGCTTTCTGATAAACTTCAACGGACTGCAAATCAACCCTCCAAGGCTCCTCCCCGAGCCGATGTCGT
GAATAGCTTGAAAAATGGAATAGTAGTGAACCTACTGGGCATGGGTGCTGCCATTCTGGGGATGCAAGCGACCGTAGGATTGTTAGTTGCTAAGGCTCTTACTTCCTCAG
CAATTCCATATTACCAGGGAGCCTCCCCTGGAAATAGCCCTGTTCTTGCTTTGGATGTATTCTTAGTACAGGCTTCTGCAAACACTATTCTCTCTCATTTCCTGGGGCTC
GTTTTCTCGTTGGAGCTACTGCGCTCGGTGACATTGCCTGCTACTGAGAGTATTCCTATACCCCGAATAGCATAATCTCCACCGTCGCCCTTCTAGTTGGTTAGATTCGA
CATCAGAGGCGACACGATATGAATTGATCACGCTTTCAGTGTCCATTTTCAAGTATCGTTTGTATTTTTGTTGCGAGCGCCGCCGTTGGTAGGGAACTTGAATAGTTGCA
GAGGTCCTTGAAGGTGTTTTCTGCGGATAGCTTCAATTGTATTAGAAGACTGTATCGGCCATGTCAAACTCTACTATCAAAATGTAGATTCAAATATGGTTCTTTGAGTT
TTAATCTCTCTTCCATTTTAATATTTACTTTGTTTTTCTTTTTCTTTAATGAAAAATATTTACATGCTTGGAAC

Protein sequence

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MQSLLSPVGRGGPFPVAAVYTSELHLSCFNRRPFSVRYASNLKSPPNSLPSFSAIRPPSSFSLLLLKNFGTLEHRRGQFCSDTCASSSPISPTVPPNDEAEKAKLAQIMQ
LREKSLPESSTPNLEEIEDYLLFEVAKRLEKTSRYFKRLGNLGFWGQLVCTIVAAVILSFSVVVTGKITSPATFYATAGGIVAAFISVFWSFGYIRLSDKLQRTANQPSK
APPRADVVNSLKNGIVVNLLGMGAAILGMQATVGLLVAKALTSSAIPYYQGASPGNSPVLALDVFLVQASANTILSHFLGLVFSLELLRSVTLPATESIPIPRIA

CmoCh19G005960 (gene) of Cucurbita moschata (Rifu) v1 genome