; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G006080 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G006080
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPhenylalanine--tRNA ligase beta subunit
Genome locationCmo_Chr19:6722861..6724613
RNA-Seq ExpressionCmoCh19G006080
SyntenyCmoCh19G006080
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7395190.1 unnamed protein product [Spirodela intermedia]4.5e-0625.61Show/hide
Query:  EEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETA--SGTVPYRRLLA-----KLRTSILAKQAKEYGIGPVRVFLLASKRMV
        EE    L R L  QP +AV   +ED P D+ PA GA+LG+ VV +GEV +    +  V +R + A     +L   + A + +  G G             
Subjt:  EEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETA--SGTVPYRRLLA-----KLRTSILAKQAKEYGIGPVRVFLLASKRMV

Query:  FSNCPISIGKQPESL-LSEKRTSIRVFLVFPVPMLLGISPVNSRVAEVSRDA------------------------LIKLIIVEEDGRDNVHIKEPWIDR
             +  G  PE   L  + T   +  V    +  G+S V     + + +A                        +++  +VE +G D    ++P ++ 
Subjt:  FSNCPISIGKQPESL-LSEKRTSIRVFLVFPVPMLLGISPVNSRVAEVSRDA------------------------LIKLIIVEEDGRDNVHIKEPWIDR

Query:  TAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVA
            + +EV++ ++  A+D + E P + +VA +E V+E + G E  +G  E VG+G+E  DV + + +  +   R  + E +E     RP V  +R  VA
Subjt:  TAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVA

Query:  PKSFVAANIGPIPCSYDIQWVVLDSTFQ
         ++ V A++ P P     Q V+ DS  +
Subjt:  PKSFVAANIGPIPCSYDIQWVVLDSTFQ

KAF1873218.1 hypothetical protein Lal_00016359 [Lupinus albus]3.1e-0753.62Show/hide
Query:  KQAKEYGIGPVRVFLLASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLVFPVPMLLGISPVNSRVAEV
        +QAKE GIGPV  FLL SK + F   PIS GK P +L  +K TS+RVF   P+  LLGI P N   A V
Subjt:  KQAKEYGIGPVRVFLLASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLVFPVPMLLGISPVNSRVAEV

KAG9453379.1 hypothetical protein H6P81_006283 [Aristolochia fimbriata]1.1e-0733.13Show/hide
Query:  VAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGM---EVCDVRQL
        VAEV R    + ++VEED R +V ++E   +R+   ++ EV+  E+   ED +RE P + +VA++ELV++L  G+  G  A E VG+ +   EV  V  L
Subjt:  VAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGM---EVCDVRQL

Query:  VGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVAANIGPIPCSYDIQWVVLDSTFQ
         G+ + G++ A +V   +A   HR  V  ++   A  + V A++G  P + ++  V +D  FQ
Subjt:  VGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVAANIGPIPCSYDIQWVVLDSTFQ

OQU81910.1 hypothetical protein SORBI_3006G139501 [Sorghum bicolor]4.8e-0826.03Show/hide
Query:  MNLTEEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETASGTVPYRRL----------LAKLRTSILAKQAKEYGIGPVRVFL
        + L EE+   ++R+L  +P +AV+ D+E    DQ PA G +  + V  + EVLE A G  P  R+            +L     A++ +  G G   V  
Subjt:  MNLTEEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETASGTVPYRRL----------LAKLRTSILAKQAKEYGIGPVRVFL

Query:  LASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLV------FPVPMLLG-ISPVNSRVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDR----TAIVIKS
            R +     +      E+++ E+    R  +        P   ++G    V+ R+ +V R+A  +L++V+EDG   +H +EP  D         ++ 
Subjt:  LASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLV------FPVPMLLG-ISPVNSRVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDR----TAIVIKS

Query:  EVQKREIDGAEDFIRER-PLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVA
        +V +  +  A+   RER   + +VA+++LV+ L    E  +GA E VG+G+E   VR++V + ++G +R   V  +E   R  P+    R         A
Subjt:  EVQKREIDGAEDFIRER-PLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVA

Query:  ANIGPIPCSYDIQWV
        A +   P   D+  V
Subjt:  ANIGPIPCSYDIQWV

RCV24953.1 hypothetical protein SETIT_5G127800v2 [Setaria italica]2.2e-0533.86Show/hide
Query:  RVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVG
        RVAEV R+   + ++VEEDG +   ++E        V++ EV++ E    ED  RER  + +VA++ELV+E +        A E VG+ +E  +V +   
Subjt:  RVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVG

Query:  QPIEGELRATK---VEIIEAKPRHRPL
           E ELR  +   V ++E  P HR L
Subjt:  QPIEGELRATK---VEIIEAKPRHRPL

TrEMBL top hitse value%identityAlignment
A0A1Z5RDS7 Uncharacterized protein2.3e-0826.03Show/hide
Query:  MNLTEEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETASGTVPYRRL----------LAKLRTSILAKQAKEYGIGPVRVFL
        + L EE+   ++R+L  +P +AV+ D+E    DQ PA G +  + V  + EVLE A G  P  R+            +L     A++ +  G G   V  
Subjt:  MNLTEEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETASGTVPYRRL----------LAKLRTSILAKQAKEYGIGPVRVFL

Query:  LASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLV------FPVPMLLG-ISPVNSRVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDR----TAIVIKS
            R +     +      E+++ E+    R  +        P   ++G    V+ R+ +V R+A  +L++V+EDG   +H +EP  D         ++ 
Subjt:  LASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLV------FPVPMLLG-ISPVNSRVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDR----TAIVIKS

Query:  EVQKREIDGAEDFIRER-PLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVA
        +V +  +  A+   RER   + +VA+++LV+ L    E  +GA E VG+G+E   VR++V + ++G +R   V  +E   R  P+    R         A
Subjt:  EVQKREIDGAEDFIRER-PLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVA

Query:  ANIGPIPCSYDIQWV
        A +   P   D+  V
Subjt:  ANIGPIPCSYDIQWV

A0A368R482 Uncharacterized protein1.1e-0533.86Show/hide
Query:  RVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVG
        RVAEV R+   + ++VEEDG +   ++E        V++ EV++ E    ED  RER  + +VA++ELV+E +        A E VG+ +E  +V +   
Subjt:  RVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVG

Query:  QPIEGELRATK---VEIIEAKPRHRPL
           E ELR  +   V ++E  P HR L
Subjt:  QPIEGELRATK---VEIIEAKPRHRPL

A0A4S8K6N4 Uncharacterized protein1.1e-0531.41Show/hide
Query:  VAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDV---RQL
        VAEV RD   + ++V+E+G   + ++E W  R   ++++EV+  E   AED +RE   + IVA IELV+E +     G GA E +G+ +E  +V    +L
Subjt:  VAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDV---RQL

Query:  VGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVAANIGPIPCSYDIQWV
        VG+       A++V ++E        V   R   A  + V A+ G  P + ++Q +
Subjt:  VGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVAANIGPIPCSYDIQWV

A0A6A5ML84 Uncharacterized protein1.5e-0753.62Show/hide
Query:  KQAKEYGIGPVRVFLLASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLVFPVPMLLGISPVNSRVAEV
        +QAKE GIGPV  FLL SK + F   PIS GK P +L  +K TS+RVF   P+  LLGI P N   A V
Subjt:  KQAKEYGIGPVRVFLLASKRMVFSNCPISIGKQPESLLSEKRTSIRVFLVFPVPMLLGISPVNSRVAEV

A0A7I8KBM7 Hypothetical protein2.2e-0625.61Show/hide
Query:  EEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETA--SGTVPYRRLLA-----KLRTSILAKQAKEYGIGPVRVFLLASKRMV
        EE    L R L  QP +AV   +ED P D+ PA GA+LG+ VV +GEV +    +  V +R + A     +L   + A + +  G G             
Subjt:  EEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETA--SGTVPYRRLLA-----KLRTSILAKQAKEYGIGPVRVFLLASKRMV

Query:  FSNCPISIGKQPESL-LSEKRTSIRVFLVFPVPMLLGISPVNSRVAEVSRDA------------------------LIKLIIVEEDGRDNVHIKEPWIDR
             +  G  PE   L  + T   +  V    +  G+S V     + + +A                        +++  +VE +G D    ++P ++ 
Subjt:  FSNCPISIGKQPESL-LSEKRTSIRVFLVFPVPMLLGISPVNSRVAEVSRDA------------------------LIKLIIVEEDGRDNVHIKEPWIDR

Query:  TAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVA
            + +EV++ ++  A+D + E P + +VA +E V+E + G E  +G  E VG+G+E  DV + + +  +   R  + E +E     RP V  +R  VA
Subjt:  TAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYGAKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVA

Query:  PKSFVAANIGPIPCSYDIQWVVLDSTFQ
         ++ V A++ P P     Q V+ DS  +
Subjt:  PKSFVAANIGPIPCSYDIQWVVLDSTFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTTACTGAAGAAATAAGAACATTCCTTCTCCGATCTCTGTCCCGGCAGCCCCAAAATGCAGTTTCCAGAGACATCGAGGATTTTCCTTCCGATCAAGCTCCGGC
AAACGGGGCCGACTTGGGTCAAGAAGTTGTTGTAAAGGGTGAAGTTTTGGAGACCGCCTCCGGAACAGTGCCGTATAGGCGGTTGTTGGCGAAGTTGAGAACCTCCATTT
TGGCCAAGCAGGCAAAGGAGTATGGGATCGGGCCGGTGAGGGTGTTCTTGCTCGCGTCGAAGAGAATGGTGTTTTCTAATTGCCCGATCTCCATCGGTAAGCAGCCGGAG
AGCTTGTTGTCGGAGAAGAGGACCTCGATTAGGGTTTTCCTTGTCTTTCCGGTTCCGATGCTTCTTGGGATTTCGCCGGTGAACTCGCGTGTTGCCGAGGTTAGCCGGGA
TGCTCTGATTAAACTTATTATTGTTGAGGAAGATGGCCGCGATAATGTCCATATCAAAGAGCCTTGGATTGACCGGACCGCAATAGTAATTAAATCGGAGGTCCAAAAAC
GTGAGATTGACGGCGCCGAGGACTTCATCAGGGAACGACCCCTTAAATTTATTGTTGCTAAGATCGAGCTCGTACAAGAACTTGACCATGGCAATGAGTTTGGGTATGGT
GCCAAAGAAAAAGTTGGAATTGGCATGGAAGTATGCGATGTCCGACAACTTGTCGGCCAGCCCATCGAGGGTGAGCTTAGAGCCACTAAAGTTGAAATTATTGAAGCTAA
GCCCCGACACCGCCCTCTTGTTTTCAGCATCCGGATATTTGTCGCACCTAAATCCTTTGTAGCTGCAAACATCGGTCCCATTCCATGTAGCTATGACATTCAATGGGTCG
TTCTCGATTCTACTTTTCAATTTCGATTCTCTTGCTCTCGAATCTTAGTGTCGGTAGCTTTGCTGGACTTCGTTTCGGTGAACGATGTTTCGGAGAGGTCGCTGGTGCTG
GCTTCGATGGTAATGGCGGAGGTGGAGATGGAGGCCGTGGTGGAGGAGGAGAAGGAGGAGGAGGAGAAGTGTTACAATCGGGAGATGTCGATGGCGGAGGAGAGTTGCTG
CCACCGCCAATGCCGATGCCGATGCCGATGTCGAGGGCGAGGGCGGAAAAGGAAGAGAAGAGGAGGAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTTACTGAAGAAATAAGAACATTCCTTCTCCGATCTCTGTCCCGGCAGCCCCAAAATGCAGTTTCCAGAGACATCGAGGATTTTCCTTCCGATCAAGCTCCGGC
AAACGGGGCCGACTTGGGTCAAGAAGTTGTTGTAAAGGGTGAAGTTTTGGAGACCGCCTCCGGAACAGTGCCGTATAGGCGGTTGTTGGCGAAGTTGAGAACCTCCATTT
TGGCCAAGCAGGCAAAGGAGTATGGGATCGGGCCGGTGAGGGTGTTCTTGCTCGCGTCGAAGAGAATGGTGTTTTCTAATTGCCCGATCTCCATCGGTAAGCAGCCGGAG
AGCTTGTTGTCGGAGAAGAGGACCTCGATTAGGGTTTTCCTTGTCTTTCCGGTTCCGATGCTTCTTGGGATTTCGCCGGTGAACTCGCGTGTTGCCGAGGTTAGCCGGGA
TGCTCTGATTAAACTTATTATTGTTGAGGAAGATGGCCGCGATAATGTCCATATCAAAGAGCCTTGGATTGACCGGACCGCAATAGTAATTAAATCGGAGGTCCAAAAAC
GTGAGATTGACGGCGCCGAGGACTTCATCAGGGAACGACCCCTTAAATTTATTGTTGCTAAGATCGAGCTCGTACAAGAACTTGACCATGGCAATGAGTTTGGGTATGGT
GCCAAAGAAAAAGTTGGAATTGGCATGGAAGTATGCGATGTCCGACAACTTGTCGGCCAGCCCATCGAGGGTGAGCTTAGAGCCACTAAAGTTGAAATTATTGAAGCTAA
GCCCCGACACCGCCCTCTTGTTTTCAGCATCCGGATATTTGTCGCACCTAAATCCTTTGTAGCTGCAAACATCGGTCCCATTCCATGTAGCTATGACATTCAATGGGTCG
TTCTCGATTCTACTTTTCAATTTCGATTCTCTTGCTCTCGAATCTTAGTGTCGGTAGCTTTGCTGGACTTCGTTTCGGTGAACGATGTTTCGGAGAGGTCGCTGGTGCTG
GCTTCGATGGTAATGGCGGAGGTGGAGATGGAGGCCGTGGTGGAGGAGGAGAAGGAGGAGGAGGAGAAGTGTTACAATCGGGAGATGTCGATGGCGGAGGAGAGTTGCTG
CCACCGCCAATGCCGATGCCGATGCCGATGTCGAGGGCGAGGGCGGAAAAGGAAGAGAAGAGGAGGAGATTAA
Protein sequenceShow/hide protein sequence
MNLTEEIRTFLLRSLSRQPQNAVSRDIEDFPSDQAPANGADLGQEVVVKGEVLETASGTVPYRRLLAKLRTSILAKQAKEYGIGPVRVFLLASKRMVFSNCPISIGKQPE
SLLSEKRTSIRVFLVFPVPMLLGISPVNSRVAEVSRDALIKLIIVEEDGRDNVHIKEPWIDRTAIVIKSEVQKREIDGAEDFIRERPLKFIVAKIELVQELDHGNEFGYG
AKEKVGIGMEVCDVRQLVGQPIEGELRATKVEIIEAKPRHRPLVFSIRIFVAPKSFVAANIGPIPCSYDIQWVVLDSTFQFRFSCSRILVSVALLDFVSVNDVSERSLVL
ASMVMAEVEMEAVVEEEKEEEEKCYNREMSMAEESCCHRQCRCRCRCRGRGRKRKRRGGD