; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G006190 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G006190
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCmo_Chr19:6793342..6796662
RNA-Seq ExpressionCmoCh19G006190
SyntenyCmoCh19G006190
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011651.1 hypothetical protein SDJN02_26557 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-13892.83Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSE-------------------SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
        KMRRKPIMPNISSSE                   SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI
Subjt:  KMRRKPIMPNISSSE-------------------SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHI

Query:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  RNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]1.7e-142100Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]3.4e-135100Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

XP_022972372.1 uncharacterized protein LOC111470946 isoform X1 [Cucurbita maxima]1.6e-13294.23Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

XP_023553838.1 uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]1.2e-13293.85Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        K+RRK IMPNISSSES+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP C
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RVKLGIA D SLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

TrEMBL top hitse value%identityAlignment
A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X21.7e-135100Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

A0A6J1GJF7 uncharacterized protein LOC111454842 isoform X33.7e-11185Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSE  V Q                                H  S  NQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X18.2e-143100Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1I4M4 uncharacterized protein LOC111470946 isoform X17.7e-13394.23Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X21.1e-12694.74Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQ

Query:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC
        KMRRKPIMPNISSSESMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPC
Subjt:  KMRRKPIMPNISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPC

Query:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV
        CRDSHTIV EVSDQNFVDTHPGELS GTPITKRLKKASSDS GN+RV
Subjt:  CRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRV

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 272.0e-0832.02Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQN
          WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I     EVSDQN
Subjt:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQN

Query:  FVD
        FV+
Subjt:  FVD

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)1.0e-0429.69Show/hide
Query:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNI--SS
        DR+   + + S      S S  S  T + S  D          +LD   T WT EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNI--SS

Query:  SESMVLQDASWQKANVGRTDPLLDKTAD
         +  VLQ+  WQK N G+    L+ +++
Subjt:  SESMVLQDASWQKANVGRTDPLLDKTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown1.0e-0429.69Show/hide
Query:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNI--SS
        DR+   + + S      S S  S  T + S  D          +LD   T WT EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNI--SS

Query:  SESMVLQDASWQKANVGRTDPLLDKTAD
         +  VLQ+  WQK N G+    L+ +++
Subjt:  SESMVLQDASWQKANVGRTDPLLDKTAD

AT5G42900.1 cold regulated gene 271.4e-0932.02Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQN
          WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I     EVSDQN
Subjt:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQN

Query:  FVD
        FV+
Subjt:  FVD

AT5G42900.2 cold regulated gene 271.4e-0932.02Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQN
          WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I     EVSDQN
Subjt:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQN

Query:  FVD
        FV+
Subjt:  FVD

AT5G42900.3 cold regulated gene 271.1e-0932.18Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD
        R + +S  SS+   + EG+     S +    + ++T WT EKH L+L S+EASFV  L  Y  L AL   + +         RKP     S  +  VL D
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMR--------RKPIMPNISSSESMVLQD

Query:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVT--EVSDQNF
          WQK NV + +  ++     +S   L   WI H+ P    Q  +  TD  E        S+ +    S  SA S +Q+    RD   I    EVSDQNF
Subjt:  ASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVT--EVSDQNF

Query:  VD
        V+
Subjt:  VD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTC
TTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGAT
TATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAAT
ATATCTTCTTCAGAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGA
GGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACA
AGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCAT
CCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTT
GGAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGA
TTTTCTATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCTCCCGGAATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCA
CCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCA
TTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATC
TTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTT
GGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTAC
TGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTG
ATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCT
GATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTCA
TCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACAGTGCAAGAGGGAGCTGAC
AACAACTCATTCCAACATGTGAAGACACCCGGCTGTTCAAGTTCGTTATCCGAACGCAACACGATTCTGTTTTCCTTCCGAAAGAGCATCGAAAAGTAAATAAGGGAAGT
GACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAAACTTTTTCTTAGTTCATCAAATATAGAGTGAAAATATATG
TTAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTAGAGTTTGAAGAAATGGAAATTCCAATAGATTTAGGGTATGAATATACATGATATAGAGAAAGCTAGACACCGAC
CCTGATACTGATATAGATATACACACCCTTTTACATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGTAGAGACCTCAAATGTAAATTACTATTACATAAAACAATAG
ATTTGAACAGACTTATTGATTCTCTTTAGGTGGAGCCTTTCTTTTGCTTATGGAGTATGTTGATGGCTAAGTGCTTTCTTGACTAATTGCGTTGTTCGAATGGTTATCAA
ACGGGACTTAAGCTATTATATCTTTGCTTGCTTTGTTACGATC
Protein sequenceShow/hide protein sequence
MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPN
ISSSESMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTH
PGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ