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CmoCh19G006670 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G006670
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionhydroxyproline-rich glycoprotein family protein
Genome locationCmo_Chr19:7153673..7154050
RNA-Seq ExpressionCmoCh19G006670
SyntenyCmoCh19G006670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572025.1 hypothetical protein SDJN03_28753, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6595.12Show/hide
Query:  MKSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEK
        MKSQ PRETGPIEPPYPW TNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIY+IEYDIV KFNEIGSFVENNMESLQDRTPRSWIWP+Y TCRFCGTEK
Subjt:  MKSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEK

Query:  GVRPVIPKECEKINWVFLLLGEM
        GVRPVIPKECEKINWVFLLLGEM
Subjt:  GVRPVIPKECEKINWVFLLLGEM

KAG7011694.1 hypothetical protein SDJN02_26600, partial [Cucurbita argyrosperma subsp. argyrosperma]9.9e-4876.52Show/hide
Query:  GPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKE
        GPIEPPYPW T++ AVVHTL Y+TSNQILTITG+VKC  C+RIYE+EYD+V KFNEIG FVE+ MES +DR P+ W+ PNY TCRFCG EKGV+PVIPKE
Subjt:  GPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKE

Query:  CEKINWVFLLLGEMV
         EKINWVFLLLGEMV
Subjt:  CEKINWVFLLLGEMV

KAG7011696.1 hypothetical protein SDJN02_26602, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-6594.35Show/hide
Query:  MKSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEK
        MKSQ PRETGPIEPPYPW TNQRA VHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIV KFNEIGSFVENNMESLQDRTPRSWIWP+Y TCRFCGTEK
Subjt:  MKSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEK

Query:  GVRPVIPKECEKINWVFLLLGEMV
        GVRPVIPKECEKINWVFLLLGEM+
Subjt:  GVRPVIPKECEKINWVFLLLGEMV

XP_022952797.1 uncharacterized protein LOC111455388 [Cucurbita moschata]3.6e-5077.24Show/hide
Query:  KSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKG
        KS  P  TGPIEPPYPW T++ AVVHTL+Y+TSNQILTITG+VKC  C+RIYEIEYD+V KFNEIGSFVE+NMES +DR P+ W+ PNY TCRFCG EKG
Subjt:  KSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKG

Query:  VRPVIPKECEKINWVFLLLGEMV
        V+PVIPKE EKINWVFLLLGEMV
Subjt:  VRPVIPKECEKINWVFLLLGEMV

XP_022972401.1 uncharacterized protein LOC111470968 [Cucurbita maxima]3.1e-4978.45Show/hide
Query:  TGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPK
        TGPIEPPYPW T++ AVVHTL+Y+T NQILTITGDVKC  C+RIYEIEY++V KFNEIGSFVE+NMES +DR P+ W+ PNY TCRFCG EKGV+PVIPK
Subjt:  TGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPK

Query:  ECEKINWVFLLLGEMV
        E EKINWVFLLLGEMV
Subjt:  ECEKINWVFLLLGEMV

TrEMBL top hitse value%identityAlignment
A0A0A0K3Q8 Uncharacterized protein3.7e-4065.57Show/hide
Query:  SQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGV
        S+ PR T  IEPPYPW TN+RA+V TLN + SNQIL ITGDV+C  CQ  Y IEYD+  KF EI SFVE N  S +DR P+SW+ PNY TCRFCG E G 
Subjt:  SQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGV

Query:  RPVIPKECEKINWVFLLLGEMV
        RPVIPK+  KINW+FLLLGEM+
Subjt:  RPVIPKECEKINWVFLLLGEMV

A0A1S3BHR1 uncharacterized protein LOC1034897706.3e-4065.57Show/hide
Query:  SQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGV
        S+ PR T  IEPPYPW TN+RA+V TLN + S+QIL ITGDV+C  CQ  Y IEYD+V KF EI SFVE N    +DR PRSW+ PNY TCRFCG E G 
Subjt:  SQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGV

Query:  RPVIPKECEKINWVFLLLGEMV
        RPVIP E  KINW+FLLLGEM+
Subjt:  RPVIPKECEKINWVFLLLGEMV

A0A5A7T547 Uncharacterized protein6.3e-4065.57Show/hide
Query:  SQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGV
        S+ PR T  IEPPYPW TN+RA+V TLN + S+QIL ITGDV+C  CQ  Y IEYD+V KF EI SFVE N    +DR PRSW+ PNY TCRFCG E G 
Subjt:  SQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGV

Query:  RPVIPKECEKINWVFLLLGEMV
        RPVIP E  KINW+FLLLGEM+
Subjt:  RPVIPKECEKINWVFLLLGEMV

A0A6J1GLD4 uncharacterized protein LOC1114553881.8e-5077.24Show/hide
Query:  KSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKG
        KS  P  TGPIEPPYPW T++ AVVHTL+Y+TSNQILTITG+VKC  C+RIYEIEYD+V KFNEIGSFVE+NMES +DR P+ W+ PNY TCRFCG EKG
Subjt:  KSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKG

Query:  VRPVIPKECEKINWVFLLLGEMV
        V+PVIPKE EKINWVFLLLGEMV
Subjt:  VRPVIPKECEKINWVFLLLGEMV

A0A6J1I5V9 uncharacterized protein LOC1114709681.5e-4978.45Show/hide
Query:  TGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPK
        TGPIEPPYPW T++ AVVHTL+Y+T NQILTITGDVKC  C+RIYEIEY++V KFNEIGSFVE+NMES +DR P+ W+ PNY TCRFCG EKGV+PVIPK
Subjt:  TGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPK

Query:  ECEKINWVFLLLGEMV
        E EKINWVFLLLGEMV
Subjt:  ECEKINWVFLLLGEMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49330.1 hydroxyproline-rich glycoprotein family protein2.6e-3040.5Show/hide
Query:  KSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKG
        +S + +++  I PP+PW TN+R  + +L Y+ SNQI TITG+V+C HC+++Y++ Y++  +F E+  F       ++DR  + W +P    C  CG EK 
Subjt:  KSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKG

Query:  VRPVIPKECEKINWVFLLLGE
        V+PVI +   +INW+FLLLG+
Subjt:  VRPVIPKECEKINWVFLLLGE

AT2G16190.1 BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G49330.1)2.2e-2138.94Show/hide
Query:  IEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKECE
        I PPYPW T +   + +   ++SN I  I+G V C  C R   +EY++  KF+E+  +++ N E ++ R P SW  P    CR C +E  ++PV+ +  E
Subjt:  IEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKECE

Query:  KINWVFLLLGEMV
        +INW+FLLLG+M+
Subjt:  KINWVFLLLGEMV

AT2G16190.2 FUNCTIONS IN: molecular_function unknown2.2e-2138.94Show/hide
Query:  IEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKECE
        I PPYPW T +   + +   ++SN I  I+G V C  C R   +EY++  KF+E+  +++ N E ++ R P SW  P    CR C +E  ++PV+ +  E
Subjt:  IEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKECE

Query:  KINWVFLLLGEMV
        +INW+FLLLG+M+
Subjt:  KINWVFLLLGEMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTCAAATACCGAGAGAGACGGGGCCGATCGAGCCACCATATCCATGGTTGACGAACCAAAGAGCGGTGGTTCATACACTAAACTATATGACATCGAACCAAAT
CCTAACGATCACTGGGGATGTCAAGTGCCACCATTGTCAAAGAATTTACGAGATCGAATACGACATTGTTTTGAAGTTCAACGAGATCGGGAGCTTCGTAGAGAACAACA
TGGAGTCGCTCCAGGACCGGACGCCGAGGTCGTGGATATGGCCGAATTATTCGACGTGTCGGTTTTGCGGGACGGAAAAAGGAGTGAGGCCGGTGATTCCAAAGGAATGT
GAGAAGATCAATTGGGTGTTCTTGCTTTTGGGAGAAATGGTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTCAAATACCGAGAGAGACGGGGCCGATCGAGCCACCATATCCATGGTTGACGAACCAAAGAGCGGTGGTTCATACACTAAACTATATGACATCGAACCAAAT
CCTAACGATCACTGGGGATGTCAAGTGCCACCATTGTCAAAGAATTTACGAGATCGAATACGACATTGTTTTGAAGTTCAACGAGATCGGGAGCTTCGTAGAGAACAACA
TGGAGTCGCTCCAGGACCGGACGCCGAGGTCGTGGATATGGCCGAATTATTCGACGTGTCGGTTTTGCGGGACGGAAAAAGGAGTGAGGCCGGTGATTCCAAAGGAATGT
GAGAAGATCAATTGGGTGTTCTTGCTTTTGGGAGAAATGGTGTTGTAA
Protein sequenceShow/hide protein sequence
MKSQIPRETGPIEPPYPWLTNQRAVVHTLNYMTSNQILTITGDVKCHHCQRIYEIEYDIVLKFNEIGSFVENNMESLQDRTPRSWIWPNYSTCRFCGTEKGVRPVIPKEC
EKINWVFLLLGEMVL