; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G006930 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G006930
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionlate embryogenesis abundant protein-like
Genome locationCmo_Chr19:7319650..7321257
RNA-Seq ExpressionCmoCh19G006930
SyntenyCmoCh19G006930
Gene Ontology termsGO:0009415 - response to water (biological process)
InterPro domainsIPR000167 - Dehydrin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572053.1 Embryogenic cell protein 40, partial [Cucurbita argyrosperma subsp. sororia]7.1e-7990.71Show/hide
Query:  MEGMRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGS
        MEGMRMAKMADIQDEYGNPIQL DEHGNPVVLTDEHGNPVRLSG+ATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMP  EHEDGGS
Subjt:  MEGMRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGS

Query:  GTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
        GTHVGSATSGSSPSEEE+     +KKKKKKKGL QKIKEKLTGGKHREEQPQASSPPTT ATTTA+PITTNKIH+GE A NIL
Subjt:  GTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL

KAG7011719.1 Embryogenic cell protein 40 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-8393.99Show/hide
Query:  MEGMRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGS
        MEGMRMAKMADIQDEYGNPIQL DEHGNPVVLTDEHGNPVRLSG+ATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGS
Subjt:  MEGMRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGS

Query:  GTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
        GTHVGSATSGSSPSEEEEQSE  KKKKKKKKGL QKIKEKLTGGKHREEQPQASSPPTT AT TA+PITTNKIH+GE A NIL
Subjt:  GTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL

XP_022953104.1 late embryogenesis abundant protein-like [Cucurbita moschata]2.5e-84100Show/hide
Query:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
        QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
Subjt:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS

Query:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
        PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
Subjt:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL

XP_022975199.1 late embryogenesis abundant protein-like [Cucurbita maxima]7.9e-5483.67Show/hide
Query:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
        QDEYGNPIQ  DEHGNPVVLTDEHGNPVR  G+ATKVGTTLGSLIFGSG EDGGGHG   DA+GSSGGGNG  EQELMPV E+EDGGSGTHVGSATSGSS
Subjt:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS

Query:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTT
        PSEEE+QSEKR     KKKGL QKIKEKLTGGKH+EEQPQ S PPTT
Subjt:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTT

XP_023511710.1 late embryogenesis abundant protein-like isoform X1 [Cucurbita pepo subsp. pepo]7.9e-7087.72Show/hide
Query:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
        QDEYGNPIQL DEHGNPVVLTDEHGNPVRLSG+ATKVGTTLGSLIFGSG EDGG HGSA DA+GSSGGGNGDGEQELMPV EHEDGGSGTHVGSATSGSS
Subjt:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS

Query:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
        PSEEE QS      KKKKKGL QKIKEKLTGGKH+EEQ Q SSPPTT ATTT SPITTNKIH+GEPAHNIL
Subjt:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL

TrEMBL top hitse value%identityAlignment
A0A6J1C1Y9 late embryogenesis abundant protein-like3.7e-3354.26Show/hide
Query:  KMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSA
        KMADI+DE+GNPI+L DE GNPVVLTDEHGNP+RL+G+ATK+G TLGSL+  SG +DG              GG+GDGEQEL+P   H+DGG    V S 
Subjt:  KMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSA

Query:  TSGSSP-SEEEEQS----------------------EKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNK
        TSGSS   EEEEQS                      +KRKKK +KKKG  QKIKEKLTG +H+EEQP    P TTTAT TA+P + ++
Subjt:  TSGSSP-SEEEEQS----------------------EKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNK

A0A6J1GNP3 late embryogenesis abundant protein-like1.2e-84100Show/hide
Query:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
        QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
Subjt:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS

Query:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
        PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL
Subjt:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL

A0A6J1IJR5 late embryogenesis abundant protein-like3.8e-5483.67Show/hide
Query:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS
        QDEYGNPIQ  DEHGNPVVLTDEHGNPVR  G+ATKVGTTLGSLIFGSG EDGGGHG   DA+GSSGGGNG  EQELMPV E+EDGGSGTHVGSATSGSS
Subjt:  QDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSGSS

Query:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTT
        PSEEE+QSEKR     KKKGL QKIKEKLTGGKH+EEQPQ S PPTT
Subjt:  PSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTT

G4XR61 Dehydrin 43.2e-1641.58Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIAT--KVGTTLGSLI----------------FGSGDEDGGGHGSACDAEGSSGGGNGDGEQELM
        MAD++DE+GNPIQL D+HGNPV LTDEHGNP+ L+G+A+   + TT  + +                FG G  D   HG A  A   + GG G       
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIAT--KVGTTLGSLI----------------FGSGDEDGGGHGSACDAEGSSGGGNGDGEQELM

Query:  PVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQ---PQASSPPTTTATTTASPITTNKIHYGE
         VV HE   S       +S SS SE++ Q  +R      KKGL +KIKEKLTGGKH+EEQ   P      TTT TT ++      +H+ E
Subjt:  PVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQ---PQASSPPTTTATTTASPITTNKIHYGE

V9M5C3 Dehydrin protein4.7e-2048.72Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDG---GGHGSACDAEGSSGGGNGDGEQELMPVVE-HEDGGSGTHV
        MAD++DEYGNPIQL DEHGNPV LTDEHGNPV ++G+AT    TLG+L+       G     +G+   ++G +G      ++E  P  +  E  GSG   
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDG---GGHGSACDAEGSSGGGNGDGEQELMPVVE-HEDGGSGTHV

Query:  GSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTT
         S+TS SS SE++ Q  +R     KKKGL +KIKEKLTGGKH+EEQ   +S  T T
Subjt:  GSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTT

SwissProt top hitse value%identityAlignment
P21298 Late embryogenesis abundant protein2.5e-1035.54Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKV----GTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHV
        MAD++DE GNPI L D +GNPV L+DE GNP+ ++G+A+       +  G++     +    G  +   A  ++  G    E       +   G  G H+
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKV----GTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHV

Query:  -GSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSP---PTTTATTTAS
          S +S SS SE++ Q  +R      KK +  KIK+KL GGKH++EQ   ++    PTTT TTT +
Subjt:  -GSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSP---PTTTATTTAS

Q07322 Embryogenic cell protein 405.1e-1143.4Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSAT
        MAD++DE GNPIQL D+HGNPV LTDE+GNPV ++G+AT   TT        G  D G  G++    GS+G G   G   L           G+H G+ T
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSAT

Query:  SGSSPS
         G  P+
Subjt:  SGSSPS

Q96261 Probable dehydrin LEA1.6e-0938.04Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVV-LTDEHGNPVRLSG---------------IATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSG--GGNGDGEQELM
        MAD++DE GNPI L D  GNP+V LTDEHGNP+ L+G               IA    +T+G     +    G G  +A  A G S   G    G+Q   
Subjt:  MADIQDEYGNPIQLNDEHGNPVV-LTDEHGNPVRLSG---------------IATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSG--GGNGDGEQELM

Query:  PVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIH
         + EH          S +S SS SE++ Q  +R      KK + +KIKEK   GKH++EQ  A      TATTT  P TT++ H
Subjt:  PVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIH

Arabidopsis top hitse value%identityAlignment
AT2G21490.1 dehydrin LEA1.2e-1038.04Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVV-LTDEHGNPVRLSG---------------IATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSG--GGNGDGEQELM
        MAD++DE GNPI L D  GNP+V LTDEHGNP+ L+G               IA    +T+G     +    G G  +A  A G S   G    G+Q   
Subjt:  MADIQDEYGNPIQLNDEHGNPVV-LTDEHGNPVRLSG---------------IATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSG--GGNGDGEQELM

Query:  PVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIH
         + EH          S +S SS SE++ Q  +R      KK + +KIKEK   GKH++EQ  A      TATTT  P TT++ H
Subjt:  PVVEHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIH

AT4G39130.1 Dehydrin family protein1.6e-0758.54Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKV
        MAD++DE GNPI L D HG P  L DE GN + L+G+AT V
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKV

AT5G66400.1 Dehydrin family protein8.0e-0433.75Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLT-DEHGNPVRLSGIAT--------KVGTTLGSLIFGSGDE------DGGGHGSACDAEGSSGGGNGDGEQELMPVV
        MA  Q+  G   Q  DE+GNP+    DE+GNP+   G  T          G   G   +GSG +       G G G+  +  G+ GG    G+++L    
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLT-DEHGNPVRLSGIAT--------KVGTTLGSLIFGSGDE------DGGGHGSACDAEGSSGGGNGDGEQELMPVV

Query:  EHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQA
        +   GG G  +  + SGSS S E++    R     +KKG+ QKIKEKL G   +  Q QA
Subjt:  EHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQA

AT5G66400.2 Dehydrin family protein3.6e-0433.75Show/hide
Query:  MADIQDEYGNPIQLNDEHGNPVVLT-DEHGNPVRLSGIAT--------KVGTTLGSLIFGSGDE------DGGGHGSACDAEGSSGGGNGDGEQELMPVV
        MA  Q+  G   Q  DE+GNP+    DE+GNP+   G  T          G   G   +GSG +       G G G+  +  G+ GG    G+++L    
Subjt:  MADIQDEYGNPIQLNDEHGNPVVLT-DEHGNPVRLSGIAT--------KVGTTLGSLIFGSGDE------DGGGHGSACDAEGSSGGGNGDGEQELMPVV

Query:  EHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQA
        +   GG G  +  + SGSS S ++ Q  +R      KKG+ QKIKEKL G   +  Q QA
Subjt:  EHEDGGSGTHVGSATSGSSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGATGAGAATGGCGAAAATGGCTGATATACAGGACGAGTATGGCAACCCCATCCAACTCAACGACGAGCATGGCAACCCGGTTGTGTTGACTGATGAACATGG
CAACCCCGTGAGGCTCTCTGGCATTGCAACCAAGGTCGGCACGACACTCGGGTCGCTGATCTTTGGCAGTGGTGATGAGGATGGTGGTGGCCATGGCAGTGCTTGTGATG
CTGAAGGTAGTTCAGGTGGTGGCAATGGCGACGGCGAGCAGGAGCTGATGCCGGTCGTGGAGCATGAAGATGGCGGCTCAGGTACACATGTTGGCTCGGCCACTTCAGGC
TCTAGTCCGTCTGAGGAAGAAGAACAAAGTGAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAAGGACTGAATCAAAAGATAAAAGAGAAGCTAACAGGAGGGAAGCATAG
AGAGGAGCAACCTCAAGCTTCTTCCCCTCCGACCACCACCGCAACTACAACCGCCTCTCCGATCACCACAAACAAAATTCACTATGGGGAACCCGCTCATAATATTCTCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGATGAGAATGGCGAAAATGGCTGATATACAGGACGAGTATGGCAACCCCATCCAACTCAACGACGAGCATGGCAACCCGGTTGTGTTGACTGATGAACATGG
CAACCCCGTGAGGCTCTCTGGCATTGCAACCAAGGTCGGCACGACACTCGGGTCGCTGATCTTTGGCAGTGGTGATGAGGATGGTGGTGGCCATGGCAGTGCTTGTGATG
CTGAAGGTAGTTCAGGTGGTGGCAATGGCGACGGCGAGCAGGAGCTGATGCCGGTCGTGGAGCATGAAGATGGCGGCTCAGGTACACATGTTGGCTCGGCCACTTCAGGC
TCTAGTCCGTCTGAGGAAGAAGAACAAAGTGAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAAGGACTGAATCAAAAGATAAAAGAGAAGCTAACAGGAGGGAAGCATAG
AGAGGAGCAACCTCAAGCTTCTTCCCCTCCGACCACCACCGCAACTACAACCGCCTCTCCGATCACCACAAACAAAATTCACTATGGGGAACCCGCTCATAATATTCTCT
GAATTGCTTTTGGTTCGTGTACTTGAAGACCTGACTGTATTTTCAAAGATTTTGATTGTATTTTCAAAGATTTTGATTCGGTTTCAAAGTTGGTAGATCATATTTTAGTT
CGTGGACTTTTCATCCATGAGGTAAATTGATATTTTTATTAAACCGAAAAAAAAAATGATAGAATATAAGAGAAAGTAATTTTTTATAAAACTGAGATTGGTTGTGAAAT
TTAAGGGTGTAGAAACTTATTCTATCCGTCTTAAAATATGAGGCAAAACAGATAATATCTACTAGTGGTGTGTTTGAATTATTACAAATGATATGTTTGAACCAGATATC
GAGCGGTGTATCAGCGAGAATGCTGG
Protein sequenceShow/hide protein sequence
MEGMRMAKMADIQDEYGNPIQLNDEHGNPVVLTDEHGNPVRLSGIATKVGTTLGSLIFGSGDEDGGGHGSACDAEGSSGGGNGDGEQELMPVVEHEDGGSGTHVGSATSG
SSPSEEEEQSEKRKKKKKKKKGLNQKIKEKLTGGKHREEQPQASSPPTTTATTTASPITTNKIHYGEPAHNIL