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CmoCh19G007050 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007050
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description30S ribosomal protein S31, mitochondrial-like
Genome locationCmo_Chr19:7427313..7427573
RNA-Seq ExpressionCmoCh19G007050
SyntenyCmoCh19G007050
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572068.1 30S ribosomal protein S31, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.8e-3998.84Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGALAKRVMAAER SPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]1.1e-3795.35Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]8.9e-40100Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022969451.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita maxima]5.8e-3998.84Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGALAKRVMAAERRSPS TSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_023554667.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita pepo subsp. pepo]2.9e-3897.67Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGALAKRVMAAER SP LTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A5A7SX60 30S ribosomal protein S314.9e-3690.7Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGA+A+ V+AAERRSPSLTSSMAVEGLVPILCGRGDKKTK+GK FKGSYGNARPKKEKKI+RIKDKIEVP STPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial5.3e-3895.35Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like4.3e-40100Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1HXU3 30S ribosomal protein S31, mitochondrial-like2.8e-3998.84Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAQWCGALAKRVMAAERRSPS TSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1I644 30S ribosomal protein S31, mitochondrial7.6e-3793.02Show/hide
Query:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+ VMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic3.7e-0448.89Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        + CGRGD+KT KGK F  S+GNARP+ + K  R  +++ VP + P
Subjt:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP

P47909 30S ribosomal protein S31, mitochondrial3.7e-2083.02Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        + CGRGDKKTK+GK FKGSYGNARPK+EKKI+RIKD++EVP STPWPLPFKLI
Subjt:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic3.3e-0554.55Show/hide
Query:  SLTSSMAVEGLVPIL-CGRGDKKTKKGKIFKGSYGNARPKKEKK
        SL+SS++    +P++ CGRGD+KT KGK F  S+GNARPK + K
Subjt:  SLTSSMAVEGLVPIL-CGRGDKKTKKGKIFKGSYGNARPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial1.9e-2459.57Show/hide
Query:  QWCGALAKRVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        QWCGA+ +R+M  +R S +L  S     L P           LCGRGDKKTKKGK FKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  QWCGALAKRVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein1.3e-2559.57Show/hide
Query:  QWCGALAKRVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        QWCGA+ +R+M  +R S +L  S     L P           LCGRGDKKTKKGK FKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  QWCGALAKRVMAAERRSPSLTSSMAVEGLVPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 42.6e-0548.89Show/hide
Query:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        + CGRGD+KT KGK F  S+GNARP+ + K  R  +++ VP + P
Subjt:  ILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGTGGTGCGGCGCATTAGCTAAGCGAGTGATGGCGGCGGAGCGACGGTCTCCTTCACTGACGTCGTCCATGGCGGTTGAAGGACTGGTGCCGATCCTT
TGTGGACGAGGTGACAAGAAGACGAAGAAGGGGAAAATATTCAAAGGCTCGTACGGCAACGCTAGGCCGAAGAAGGAGAAGAAGATTCAGCGAATTAAGGATAAA
ATCGAGGTTCCTAGTTCTACTCCTTGGCCTCTTCCTTTCAAGCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCAGTGGTGCGGCGCATTAGCTAAGCGAGTGATGGCGGCGGAGCGACGGTCTCCTTCACTGACGTCGTCCATGGCGGTTGAAGGACTGGTGCCGATCCTT
TGTGGACGAGGTGACAAGAAGACGAAGAAGGGGAAAATATTCAAAGGCTCGTACGGCAACGCTAGGCCGAAGAAGGAGAAGAAGATTCAGCGAATTAAGGATAAA
ATCGAGGTTCCTAGTTCTACTCCTTGGCCTCTTCCTTTCAAGCTCATCTGA
Protein sequenceShow/hide protein sequence
MAQWCGALAKRVMAAERRSPSLTSSMAVEGLVPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI