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CmoCh19G007160 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007160
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
Genome locationCmo_Chr19:7493864..7494316
RNA-Seq ExpressionCmoCh19G007160
SyntenyCmoCh19G007160
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572078.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7899.33Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        EEVLR VSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_022952621.1 auxin-induced protein 6B-like [Cucurbita moschata]5.8e-79100Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_022969444.1 auxin-induced protein 6B-like [Cucurbita maxima]1.4e-7798Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGI KSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        EEVLR VSRSESGRFLNLPDFCRRCHVDSP+SLLRESRPLLFDFADKSVC
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_023554734.1 auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]8.4e-7898.67Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR AGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        EEVLR VSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

XP_038888410.1 indole-3-acetic acid-induced protein ARG7-like [Benincasa hispida]7.6e-7190.79Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR--SAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDES
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR    GD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPCDES
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR--SAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDES

Query:  VFEEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        VFEEVLR VSRS+SGRFLN  DF RRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  VFEEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

TrEMBL top hitse value%identityAlignment
A0A0A0K0H1 Uncharacterized protein7.0e-7090.6Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR AGD PSDVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLL QAEEEYGF NQGPLAIPC+ESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSV
        EEVLR VSRSESGRFLNL D  RRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSV

A0A1S3BJN8 auxin-responsive protein SAUR36-like3.5e-6989.26Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR A D P+DVPAGHVA+CVGSSCRRFVVRAT+LNHPIF+KLLLQAEEEYGF NQGPLAIPC+ESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSV
        EEVLR VSRSESGRF+NL D  RRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSV

A0A5D3CM24 Auxin-responsive protein SAUR36-like1.2e-6989.93Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR A D P+DVPAGHVA+CVGSSCRRFVVRATYLNHPIF+KLLLQAEEEYGF NQGPLAIPC+ESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSV
        EEVLR VSRSESGRF+NL D  RRCHVDSPS LLRESRPLLFDFADKSV
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSV

A0A6J1GKR4 auxin-induced protein 6B-like2.8e-79100Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

A0A6J1I2L6 auxin-induced protein 6B-like7.0e-7898Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        MSTGI KSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
        EEVLR VSRSESGRFLNLPDFCRRCHVDSP+SLLRESRPLLFDFADKSVC
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR368.4e-1234.71Show/hide
Query:  IRRIVSIRQMLQRWRRKARVTASSRSA-----GDTPSDVPAGHVAVCVG---SSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEE
        +R +  ++   QR ++  R  ++ RSA           VP GH+A+ VG     C R +V   Y NHP+F +LL +AE+EYGF ++G + IPC  S FE 
Subjt:  IRRIVSIRQMLQRWRRKARVTASSRSA-----GDTPSDVPAGHVAVCVG---SSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEE

Query:  VLRIVSRSESGRFLNLPDFCR
        V   ++   S R       CR
Subjt:  VLRIVSRSESGRFLNLPDFCR

O64538 Auxin-responsive protein SAUR402.4e-1152.38Show/hide
Query:  SDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL
        S VP+GHV V VG    RFVV A  LNHP+F  LL ++ +EYG+  +G L IPC+  VFE+V+
Subjt:  SDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL

O65695 Auxin-responsive protein SAUR508.4e-1234.65Show/hide
Query:  KSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRI
        K++ + +   ++Q+L+R     +           P DVP GH  V VG +  R++V  ++L HP F+ LL +AEEE+GF +   L IPCDE VF+ +  +
Subjt:  KSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRI

Query:  V
        +
Subjt:  V

Q9SA49 Auxin-responsive protein SAUR412.9e-1251.28Show/hide
Query:  VPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFE---EVLRIVSRSESGRFLNL
        VPAGHV V VG    RFVV A  +NHPIF  LL ++ +EYG+A +G L IPC   VFE   E LR+     SG   NL
Subjt:  VPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFE---EVLRIVSRSESGRFLNL

Q9SGU2 Auxin-responsive protein SAUR711.1e-1142.86Show/hide
Query:  IRQMLQRWRRKARVT-----ASSRSAGDTPSD-----VPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL
        ++Q+++R  R A  T      S    G T  +     VP GHV V VG    RFVV A  LNHP+F  LL Q+ +EYG+  QG L IPC   VFE +L
Subjt:  IRQMLQRWRRKARVT-----ASSRSAGDTPSD-----VPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family3.8e-4457.42Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        M+  + K + IR IV +RQML+RWR KAR+++ SR     PSDVP+GHVAVCVGS CRRFVVRA+YLNHPI   LL+QAEEE+GFANQGPL IPC+ESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRF--LNLPDFCRRCH----VDSPSSLLRESRPLLFDFADKSV
        EE +R +SRS+S R      PD  ++C+    + S   L+ ESRPLL   A+K++
Subjt:  EEVLRIVSRSESGRF--LNLPDFCRRCH----VDSPSSLLRESRPLLFDFADKSV

AT1G75590.1 SAUR-like auxin-responsive protein family2.7e-4258.06Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        M+ G+ K + IR IV +RQML+RWR +AR+++S       PSDVP+GHVAV VGSSCRRFVVRATYLNHP+ + LL+QAEEE+GF NQGPL IPC+ESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSE---SGRFLNLPDFCRRCHV---DSPSSLLRESRPLLFDFADKSV
        EE +R +SRS+   S RF    DF + CHV    S   L  ESRPLL    +K+V
Subjt:  EEVLRIVSRSE---SGRFLNLPDFCRRCHV---DSPSSLLRESRPLLFDFADKSV

AT4G34750.1 SAUR-like auxin-responsive protein family3.8e-3653.9Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL
        + K+N I  +V IRQML++W++KA + +S+    D  SDVP GHVAV VG + RR+VVRA +LNHPIF++LL +AEEEYGFAN GPLAIPCDES+FE+++
Subjt:  IAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL

Query:  RIVSR----SESGR----FLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
         IV+R    S SGR       L D  R  HV    + + ESRPLL   A+KSVC
Subjt:  RIVSR----SESGR----FLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

AT4G34750.2 SAUR-like auxin-responsive protein family3.8e-3653.9Show/hide
Query:  IAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL
        + K+N I  +V IRQML++W++KA + +S+    D  SDVP GHVAV VG + RR+VVRA +LNHPIF++LL +AEEEYGFAN GPLAIPCDES+FE+++
Subjt:  IAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVL

Query:  RIVSR----SESGR----FLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC
         IV+R    S SGR       L D  R  HV    + + ESRPLL   A+KSVC
Subjt:  RIVSR----SESGR----FLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

AT5G10990.1 SAUR-like auxin-responsive protein family2.6e-4056.95Show/hide
Query:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF
        M+ GI K + IR IV +RQML++WR KAR+++  RS    PSDVP+GHVAV VG SCRRFVV ATYLNHPI   LL++AEEE+GFANQGPL IPC+ESVF
Subjt:  MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVF

Query:  EEVLRIVSRSESGRFLNLPDFCRRCH--VDSPSSLLRESRPLLFDFADKSV
        EE +R ++R  S RF    D  +  H  + S   LL ESRPLL   ++K++
Subjt:  EEVLRIVSRSESGRFLNLPDFCRRCH--VDSPSSLLRESRPLLFDFADKSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACTGGAATCGCTAAATCCAACAACATCCGCCGCATCGTCAGTATCCGCCAGATGCTGCAGCGGTGGCGGAGGAAAGCTCGCGTCACAGCCTCTTCTCGC
TCCGCCGGTGATACTCCGTCGGATGTTCCGGCCGGCCATGTCGCCGTCTGCGTCGGAAGTAGTTGTAGACGGTTCGTTGTTCGAGCGACGTACTTGAACCATCCG
ATCTTCAAGAAGCTTCTCTTGCAAGCCGAAGAAGAGTACGGATTCGCGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAAGAGGTTCTTCGA
ATCGTTTCCCGGTCCGAGTCTGGTCGGTTCTTGAATCTCCCCGATTTTTGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAATCTCGGCCGTTG
CTTTTTGACTTCGCCGATAAATCAGTCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACTGGAATCGCTAAATCCAACAACATCCGCCGCATCGTCAGTATCCGCCAGATGCTGCAGCGGTGGCGGAGGAAAGCTCGCGTCACAGCCTCTTCTCGC
TCCGCCGGTGATACTCCGTCGGATGTTCCGGCCGGCCATGTCGCCGTCTGCGTCGGAAGTAGTTGTAGACGGTTCGTTGTTCGAGCGACGTACTTGAACCATCCG
ATCTTCAAGAAGCTTCTCTTGCAAGCCGAAGAAGAGTACGGATTCGCGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAAGAGGTTCTTCGA
ATCGTTTCCCGGTCCGAGTCTGGTCGGTTCTTGAATCTCCCCGATTTTTGCCGCCGCTGCCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAATCTCGGCCGTTG
CTTTTTGACTTCGCCGATAAATCAGTCTGCTAA
Protein sequenceShow/hide protein sequence
MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLR
IVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC