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CmoCh19G007170 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007170
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin-responsive protein
Genome locationCmo_Chr19:7501456..7501755
RNA-Seq ExpressionCmoCh19G007170
SyntenyCmoCh19G007170
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572079.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]4.9e-50100Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

KAG7011743.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-50100Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_022952665.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]4.9e-50100Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_022969389.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]3.2e-4997.98Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDA ATATAYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

XP_023554806.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]5.4e-4997.98Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAAT TAYDGVPKGHFAVYVGE+RSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

TrEMBL top hitse value%identityAlignment
A0A0A0K5S8 Uncharacterized protein1.9e-4490.91Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKP ALK IVKRCSSLGRKQD  AT  AYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A1S3BJD0 auxin-induced protein 15A9.7e-4488.89Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        M IPKP +LK IVKRCSSLGRKQD  +T  AYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGF HHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1GME7 auxin-responsive protein SAUR50-like2.4e-50100Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1I2G2 auxin-responsive protein SAUR50-like1.5e-4997.98Show/hide
Query:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        MPIPKPAALKHIVKRCSSLGRKQDA ATATAYDGVPKGHFAVYVG+NRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
Subjt:  MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

A0A6J1JNJ6 auxin-responsive protein SAUR50-like2.6e-4185.85Show/hide
Query:  MPIPKP----AALKHIVKRCSSLGRKQDAAATATA---YDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        M I KP    AALK IVKRCSSLGRKQ+AA  ATA   +D VPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
Subjt:  MPIPKP----AALKHIVKRCSSLGRKQDAAATATA---YDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

Query:  LTAALK
        LTAALK
Subjt:  LTAALK

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.9e-2861.22Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A LK I+KRCSSLG+K             VPKGHF VYVGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

P0DKL1 Auxin-responsive protein SAUR509.1e-2358.14Show/hide
Query:  ALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS
        A+K I+K+CSS G+  D +      + VPKGHF VYVGE R+RY+VPIS L HP FQ LL+ +EEEFGF+H MG+ IPC+EV F S
Subjt:  ALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRS

P33081 Auxin-induced protein 15A7.0e-1554.43Show/hide
Query:  RKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL
        RK   AA A      PKG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+ H M GLTIPC E VF+ +T+ L
Subjt:  RKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAAL

P33083 Auxin-induced protein 6B1.2e-1456.16Show/hide
Query:  ATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEEVVFRSLTAAL
        A++ A D V KG+ AVYVGE   R+V+P+S L  P FQ LL  AEEEFG+HH + GLTIPC E VF+ +T+ L
Subjt:  ATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHH-HMGLTIPCEEVVFRSLTAAL

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 104.3e-2559.18Show/hide
Query:  AALKHIVKRCSSLGRKQDAAATATAYD-----GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        A++K IVKRCSSL + ++        +      VPKGHF VYVG NRSRY+VPIS L H +FQ LLRLAEEEFGF H MGLTIPC+EV FRSL +  +
Subjt:  AALKHIVKRCSSLGRKQDAAATATAYD-----GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family1.0e-2964Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD---GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A +K I+KRCSSLG+KQ              VPKGHF VYVGENR RYVVPIS LT P+FQ LL+ AEEEFGF H MGLTIPCEEVVFRSLT+ L+
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD---GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT2G21220.1 SAUR-like auxin-responsive protein family3.0e-2964.58Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL
        + + A LK I+KRCSSL + Q         D VPKGHF VYVGE RSRY+VPIS LTHP F+ LL+ AEEEFGF+H MGLTIPCEEVVFRSLT+ +
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAAL

AT4G34760.1 SAUR-like auxin-responsive protein family1.3e-2961.22Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A LK I+KRCSSLG+K             VPKGHF VYVGENRSRY+VPIS LTHP+FQ LL+ AEEEFGF H MGLTIPC+E+VF++LT+ ++
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYD-GVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT4G36110.1 SAUR-like auxin-responsive protein family6.6e-2961.86Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK
        + + A+LK I+KRCSSLG+K         ++ VPKGHF VYVG++RSRYVVPIS L H +FQ LL+LAEEEFGF H MGLTIPC+EVVFRSL +  +
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK

AT4G38860.1 SAUR-like auxin-responsive protein family4.3e-2863.27Show/hide
Query:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAALK
        + + A LK I+KRCSSLG+KQ         D VPKGHF VYVGE R+RY+VPIS LTHP+F  LL+ AEEEFGF H M GLTIPCEEVVF SLT+ ++
Subjt:  IPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHM-GLTIPCEEVVFRSLTAALK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGATTCCCAAGCCCGCCGCTCTCAAGCACATTGTCAAGCGCTGCTCCAGCTTAGGCCGGAAGCAAGACGCCGCCGCTACCGCCACCGCCTACGACGGCGTTCCCAA
GGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCCATTTCCCTCTTGACTCACCCCGATTTTCAGTGTCTCCTCCGCCTCGCGGAGGAGGAAT
TCGGCTTCCACCACCATATGGGCCTCACTATTCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGATTCCCAAGCCCGCCGCTCTCAAGCACATTGTCAAGCGCTGCTCCAGCTTAGGCCGGAAGCAAGACGCCGCCGCTACCGCCACCGCCTACGACGGCGTTCCCAA
GGGACATTTCGCCGTCTACGTCGGCGAGAATCGGAGCCGATATGTCGTCCCCATTTCCCTCTTGACTCACCCCGATTTTCAGTGTCTCCTCCGCCTCGCGGAGGAGGAAT
TCGGCTTCCACCACCATATGGGCCTCACTATTCCTTGTGAAGAGGTGGTTTTCCGCTCACTCACCGCCGCTCTCAAATGA
Protein sequenceShow/hide protein sequence
MPIPKPAALKHIVKRCSSLGRKQDAAATATAYDGVPKGHFAVYVGENRSRYVVPISLLTHPDFQCLLRLAEEEFGFHHHMGLTIPCEEVVFRSLTAALK