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CmoCh19G007180 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007180
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationCmo_Chr19:7510929..7511186
RNA-Seq ExpressionCmoCh19G007180
SyntenyCmoCh19G007180
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2335211.1 hypothetical protein Bca52824_006391 [Brassica carinata]1.2e-2577.78Show/hide
Query:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        RK++S  PKGF AVYVGE+QK+R+V+PISYL  PSFQDLLSK+EEEFGFDHPMGGLTIPC ED+F  VTSRL
Subjt:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

XP_008448012.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]2.2e-3895.29Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVF +VTSRL ANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

XP_011658572.1 auxin-responsive protein SAUR21 [Cucumis sativus]1.5e-3997.65Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

XP_022135747.1 auxin-responsive protein SAUR21-like [Momordica charantia]2.0e-3998.78Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA
        MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA

XP_022952260.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]4.2e-42100Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

TrEMBL top hitse value%identityAlignment
A0A0A0K4I7 Uncharacterized protein7.3e-4097.65Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL ANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

A0A5D3CP52 Auxin-responsive protein SAUR21-like1.1e-3895.29Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGF AVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVF +VTSRL ANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

A0A6J1C3M2 auxin-responsive protein SAUR21-like9.5e-4098.78Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA
        MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPIS+LKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLA

A0A6J1GL96 auxin-responsive protein SAUR21-like2.0e-42100Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

A0A6J1HY12 auxin-responsive protein SAUR21-like2.0e-42100Show/hide
Query:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
        MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC
Subjt:  MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR232.2e-2565.38Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJF7 Auxin-responsive protein SAUR221.3e-2564.1Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMGGLTIPC+ED F  VTSRL
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJF9 Auxin-responsive protein SAUR214.4e-2672.22Show/hide
Query:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Q9FJG0 Auxin-responsive protein SAUR209.8e-2666.23Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR
        ++++    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSR
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR

Q9FK62 Auxin-responsive protein SAUR247.5e-2665.38Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

Arabidopsis top hitse value%identityAlignment
AT5G18020.1 SAUR-like auxin-responsive protein family7.0e-2766.23Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR
        ++++    ++S  PKGF AVYVGE+QK+R+++PISYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSR
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSR

AT5G18030.1 SAUR-like auxin-responsive protein family3.1e-2772.22Show/hide
Query:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        R ++S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18050.1 SAUR-like auxin-responsive protein family9.1e-2764.1Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+E+EFGFDHPMGGLTIPC+ED F  VTSRL
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18060.1 SAUR-like auxin-responsive protein family1.6e-2665.38Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family5.3e-2765.38Show/hide
Query:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL
        ++++    + S  PKGF AVYVGE+QK+R+++P+SYL  PSFQ LLSK+EEEFGFDHPMGGLTIPC ED F  VTSRL
Subjt:  RLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATT
CCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAAC
GAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCCGCTTGATAAACAGCCCTAGAAAATCGTCATCGACTGTTCCGAAGGGGTTTTTCGCCGTGTACGTCGGAGAGACCCAAAAGAGACGACATGTGATT
CCGATTTCTTACTTGAAGCATCCGTCGTTTCAAGATTTGTTGAGTAAAGCCGAAGAAGAGTTCGGATTCGATCATCCGATGGGCGGCTTGACGATCCCTTGCAAC
GAAGATGTGTTCTTCGAAGTCACTTCTCGATTGGCGGCTAATTGTTGA
Protein sequenceShow/hide protein sequence
MGFRLINSPRKSSSTVPKGFFAVYVGETQKRRHVIPISYLKHPSFQDLLSKAEEEFGFDHPMGGLTIPCNEDVFFEVTSRLAANC