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CmoCh19G007260 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007260
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin responsive SAUR protein
Genome locationCmo_Chr19:7538212..7538493
RNA-Seq ExpressionCmoCh19G007260
SyntenyCmoCh19G007260
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049714.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]7.6e-3784.95Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
        MGI LPRI   KH+ RRI Q SRTAVVPKGHLAVYVG+TEKKRFLVPVAYL+NPSFH+LLS AEEEFGYDHPMGGLTFSCTEEIFF HLAR S
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS

KAE8645662.1 hypothetical protein Csa_020396 [Cucumis sativus]1.7e-3686.02Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
        MGI LPRI   KHF  RIRQ SRTA VPKGHLAVYVGETEKKRFLVPVAYL NPSFH+LLS AEEEFGYDHPMGGLTFSCTEEIFF HLAR S
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS

KAG6572091.1 hypothetical protein SDJN03_28819, partial [Cucurbita argyrosperma subsp. sororia]1.2e-45100Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
        MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS

TXG64703.1 hypothetical protein EZV62_011697 [Acer yangbiense]8.8e-2568.24Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF
        MG LLPRIVNAK  LRR   S    +VPKGH AVYVGETEKKRF+VP++YL +PSF +LL  AEEEFG+DHP GGLT  C EE+F
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF

XP_022135927.1 indole-3-acetic acid-induced protein ARG7-like [Momordica charantia]4.2e-3587.5Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQ
        MGI LPRIV++KHFLRRI QSSRTA VPKGHLAVYVGET +KKRFLVPVAYL+NPSFHSLLS +EEEFGYDHPMGGLTFSCTEEIFF+
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQ

TrEMBL top hitse value%identityAlignment
A0A0A0K4K5 Uncharacterized protein8.2e-3786.02Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
        MGI LPRI   KHF  RIRQ SRTA VPKGHLAVYVGETEKKRFLVPVAYL NPSFH+LLS AEEEFGYDHPMGGLTFSCTEEIFF HLAR S
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS

A0A5C7I5B1 Uncharacterized protein4.2e-2568.24Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF
        MG LLPRIVNAK  LRR   S    +VPKGH AVYVGETEKKRF+VP++YL +PSF +LL  AEEEFG+DHP GGLT  C EE+F
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF

A0A5D3CK22 Auxin responsive SAUR protein3.7e-3784.95Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
        MGI LPRI   KH+ RRI Q SRTAVVPKGHLAVYVG+TEKKRFLVPVAYL+NPSFH+LLS AEEEFGYDHPMGGLTFSCTEEIFF HLAR S
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS

A0A6J1C452 indole-3-acetic acid-induced protein ARG7-like2.0e-3587.5Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQ
        MGI LPRIV++KHFLRRI QSSRTA VPKGHLAVYVGET +KKRFLVPVAYL+NPSFHSLLS +EEEFGYDHPMGGLTFSCTEEIFF+
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQ

B9H127 Uncharacterized protein7.2e-2568.24Show/hide
Query:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF
        MGI LP IVNAK  L+RI  S  T+ VPKGHLAVYVGE +KKRF VP++YL +PSF +LLS AEEEFG+DH MGGLT  C+EE+F
Subjt:  MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF

SwissProt top hitse value%identityAlignment
P33081 Auxin-induced protein 15A1.0e-2067.65Show/hide
Query:  IRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF
        IR++S+ A  PKG+LAVYVGE + KRF++PV+YLN PSF  LLS AEEEFGYDHPMGGLT  C+E++F
Subjt:  IRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF

Q9FJF6 Auxin-responsive protein SAUR235.2e-2058.9Show/hide
Query:  RQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR
        R ++  +  PKG LAVYVGE++KKR+LVP++YLN PSF +LLS +EEEFG+DHPMGGLT  C E+ F    +R
Subjt:  RQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR

Q9FJF7 Auxin-responsive protein SAUR224.0e-2052.27Show/hide
Query:  LLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR
        L+  ++ AK  L   R ++  +  PKG LAVYVGE++KKR+LVP++YLN PSF +LLS +E+EFG+DHPMGGLT  C E+ F    +R
Subjt:  LLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR

Q9FJG0 Auxin-responsive protein SAUR201.4e-2054.76Show/hide
Query:  IVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR
        ++ AK  L   R ++  +  PKG LAVYVGE++KKR+LVP++YLN PSF +LLS +EEEFG+DHPMGGLT  C E+ F    +R
Subjt:  IVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR

Q9FK62 Auxin-responsive protein SAUR242.3e-2055.95Show/hide
Query:  IVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR
        ++ AK  L   R +   +  PKG LAVYVGE++KKR+LVPV+YLN PSF +LLS +EEEFG+DHPMGGLT  C E+ F    +R
Subjt:  IVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR

Arabidopsis top hitse value%identityAlignment
AT2G21200.1 SAUR-like auxin-responsive protein family1.6e-2166.15Show/hide
Query:  SSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF
        +S+ A  PKG LAVYVGE++KKR++VPV++LN PSF +LLS AEEEFG+DHPMGGLT  C E+ F
Subjt:  SSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF

AT2G21210.1 SAUR-like auxin-responsive protein family3.9e-2353.68Show/hide
Query:  MGILLPRIV-NAKHFLRRIRQSSRTAVVPKGHLAVYVGE-TEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS
        M I + R++ ++K  L+ +  SS    +PKGHLAVYVGE  +K+RF+VPV YL++P F  LL  AEEEFG+DHPMGGLT  CTE+IF    +R S
Subjt:  MGILLPRIV-NAKHFLRRIRQSSRTAVVPKGHLAVYVGE-TEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS

AT4G34770.1 SAUR-like auxin-responsive protein family5.7e-2255.32Show/hide
Query:  MGILLPRIVNAKHFLRR--------IRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF
        MGI L  +  AK  L+R        +  +S T  VPKGH+AVYVGET  +KRF++P++YLN+P F  LL+LAEEEFG+DHPMGGLT  CTE+ F
Subjt:  MGILLPRIVNAKHFLRR--------IRQSSRTAVVPKGHLAVYVGET-EKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIF

AT4G38840.1 SAUR-like auxin-responsive protein family6.7e-2354.64Show/hide
Query:  MGILLPRIV-NAKHFLRRIR-----QSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR
        M I +PR++ ++K  LR+ +      SS +  VPKG+LAVYVGE   KRF+VPV+YL+ PSF  LL  AEEEFG+DHPMGGLT  C+EEIF    +R
Subjt:  MGILLPRIV-NAKHFLRRIR-----QSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR

AT5G18020.1 SAUR-like auxin-responsive protein family9.7e-2254.76Show/hide
Query:  IVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR
        ++ AK  L   R ++  +  PKG LAVYVGE++KKR+LVP++YLN PSF +LLS +EEEFG+DHPMGGLT  C E+ F    +R
Subjt:  IVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATCCTTTTGCCAAGAATTGTAAACGCCAAGCACTTTCTGAGGCGTATTCGTCAGTCGTCGAGGACTGCAGTCGTGCCGAAAGGTCACTTGGCTGTATATGTTGG
AGAGACTGAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAACAATCCTTCCTTTCATAGCTTGTTGAGCCTGGCCGAAGAAGAGTTTGGATATGATCATCCAATGG
GTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCCAGCATTTGGCTAGACATAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATCCTTTTGCCAAGAATTGTAAACGCCAAGCACTTTCTGAGGCGTATTCGTCAGTCGTCGAGGACTGCAGTCGTGCCGAAAGGTCACTTGGCTGTATATGTTGG
AGAGACTGAAAAGAAGAGATTTTTGGTCCCTGTTGCATATTTGAACAATCCTTCCTTTCATAGCTTGTTGAGCCTGGCCGAAGAAGAGTTTGGATATGATCATCCAATGG
GTGGCCTTACTTTCTCTTGTACAGAAGAGATTTTCTTCCAGCATTTGGCTAGACATAGTTAG
Protein sequenceShow/hide protein sequence
MGILLPRIVNAKHFLRRIRQSSRTAVVPKGHLAVYVGETEKKRFLVPVAYLNNPSFHSLLSLAEEEFGYDHPMGGLTFSCTEEIFFQHLARHS