; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G007280 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007280
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionAuxin responsive SAUR protein
Genome locationCmo_Chr19:7542842..7544360
RNA-Seq ExpressionCmoCh19G007280
SyntenyCmoCh19G007280
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572092.1 Indole-3-acetic acid-induced protein ARG7, partial [Cucurbita argyrosperma subsp. sororia]6.2e-9699.43Show/hide
Query:  MDCLPTPTEMEARNPSLIPHDFDPSSGELDHGIEHGIPMPRTAKDSNAEVSIPVLDTVSSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYG
        MDCLPTPTEMEARNPSLIPHDFDPSSGELDHGIEHGIPMPRTAKDSNAEVSIPVLDTVSSKG+SKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYG
Subjt:  MDCLPTPTEMEARNPSLIPHDFDPSSGELDHGIEHGIPMPRTAKDSNAEVSIPVLDTVSSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYG

Query:  IGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS
        IGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS
Subjt:  IGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS

XP_022135840.1 auxin-induced protein 15A-like [Momordica charantia]2.1e-4896Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS
        MGIHLTGIANAKQKLQRTLS KYG+GSAVTNVPKGHFAVYVGET KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+LNCS
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS

XP_022952478.1 auxin-induced protein 15A-like [Cucurbita moschata]1.9e-60100Show/hide
Query:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
        SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
Subjt:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT

Query:  IPCSEDYFISLTSSLNCS
        IPCSEDYFISLTSSLNCS
Subjt:  IPCSEDYFISLTSSLNCS

XP_022969514.1 auxin-induced protein 15A-like [Cucurbita maxima]1.9e-60100Show/hide
Query:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
        SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
Subjt:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT

Query:  IPCSEDYFISLTSSLNCS
        IPCSEDYFISLTSSLNCS
Subjt:  IPCSEDYFISLTSSLNCS

XP_023553727.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo]2.3e-50100Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS
        MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS

TrEMBL top hitse value%identityAlignment
A0A0A0K174 Uncharacterized protein8.2e-4691.18Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        MGIHLTGIANAKQKLQRT S KYGIGSAVT  NVPKGHFAVYVGET+KKRFV+PI YLNHPLFKDLLNLAEEEFGFDHPMGGLTIPC+EDYFISLTS+LN
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

Query:  CS
        CS
Subjt:  CS

A0A5D3CL70 Auxin-induced protein 15A3.1e-4591.18Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        MGIHLTGIANAKQKLQRT S KYGIGSAVT  NVPKGHFAVYVGET+KKRFVIPI YLNHPLFKDLLNLAEEEFGFDHP GGLTIPC+EDYFISLTS+LN
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVT--NVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

Query:  CS
        CS
Subjt:  CS

A0A6J1C266 auxin-induced protein 15A-like1.0e-4896Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS
        MGIHLTGIANAKQKLQRTLS KYG+GSAVTNVPKGHFAVYVGET KKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTS+LNCS
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS

A0A6J1GKP6 auxin-induced protein 15A-like9.1e-61100Show/hide
Query:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
        SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
Subjt:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT

Query:  IPCSEDYFISLTSSLNCS
        IPCSEDYFISLTSSLNCS
Subjt:  IPCSEDYFISLTSSLNCS

A0A6J1I2U1 auxin-induced protein 15A-like9.1e-61100Show/hide
Query:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
        SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT
Subjt:  SSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLT

Query:  IPCSEDYFISLTSSLNCS
        IPCSEDYFISLTSSLNCS
Subjt:  IPCSEDYFISLTSSLNCS

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG72.9e-2459.18Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        MG  L GI       ++TLS +    S V + PKG+ AVYVGE   KRFVIP+S+LN PLF+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS L+
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

P33080 Auxin-induced protein X10A3.6e-2254.08Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        MG  L GI       ++T        S    VPKG+  VYVG+ + +RF+IP+SYLN P F+DLLN AEEEFG+DHPMGGLTIPC ED F+++TS LN
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

P33081 Auxin-induced protein 15A1.6e-2257.14Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        MG  L GI  A               S   + PKG+ AVYVGE + KRFVIP+SYLN P F+DLL+ AEEEFG+DHPMGGLTIPCSED F  +TS LN
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

Q9FJF6 Auxin-responsive protein SAUR233.6e-2265.28Show/hide
Query:  SAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        +AV+  PKG  AVYVGE++KKR+++P+SYLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L+
Subjt:  SAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

Q9FK62 Auxin-responsive protein SAUR245.5e-2362.2Show/hide
Query:  QRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSL
        ++ LS   G GSA    PKG  AVYVGE++KKR+++P+SYLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L
Subjt:  QRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.0e-2452.48Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGE-TRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNC
        M I ++ +  + ++L ++LS      S    +PKGH AVYVGE  +K+RFV+P++YL+HP F+ LL  AEEEFGFDHPMGGLTIPC+E  FI L S L+ 
Subjt:  MGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGE-TRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNC

Query:  S
        S
Subjt:  S

AT4G34770.1 SAUR-like auxin-responsive protein family8.5e-3570.19Show/hide
Query:  MGIHLTGIANAKQKLQRTLSEKYG---IGSAVTNVPKGHFAVYVGET-RKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSS
        MGI L G++ AKQKLQR+LS +       S   NVPKGH AVYVGET  +KRFVIPISYLNHPLF+ LLNLAEEEFGFDHPMGGLTIPC+EDYF +L S 
Subjt:  MGIHLTGIANAKQKLQRTLSEKYG---IGSAVTNVPKGHFAVYVGET-RKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSS

Query:  LNCS
        L+ S
Subjt:  LNCS

AT4G34810.1 SAUR-like auxin-responsive protein family5.1e-2453.92Show/hide
Query:  MGIHLTGIANAKQ---KLQRTLSEKYGIGSAVTNVPKGHFAVYVG---ETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLT
        MG+    I+NA +   KL    +      S+  +VPKGH AVYVG   E  KKRFV+PIS+LNHP FK+ L+ AEEEFGF+HPMGGLTIPC E+ F+ L 
Subjt:  MGIHLTGIANAKQ---KLQRTLSEKYGIGSAVTNVPKGHFAVYVG---ETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLT

Query:  SS
        +S
Subjt:  SS

AT4G38840.1 SAUR-like auxin-responsive protein family7.9e-2557.14Show/hide
Query:  IANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN
        + ++KQ L++         S+  +VPKG+ AVYVGE   KRFV+P+SYL+ P F+DLL  AEEEFGFDHPMGGLTIPCSE+ FI L S  N
Subjt:  IANAKQKLQRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLN

AT5G18080.1 SAUR-like auxin-responsive protein family3.9e-2462.2Show/hide
Query:  QRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSL
        ++ LS   G GSA    PKG  AVYVGE++KKR+++P+SYLN P F+ LL+ +EEEFGFDHPMGGLTIPC ED FI++TS L
Subjt:  QRTLSEKYGIGSAVTNVPKGHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTGCCTACCCACACCAACCGAGATGGAAGCTCGCAATCCCTCCCTAATCCCACACGACTTCGATCCTTCCAGTGGAGAACTAGATCATGGTATTGAACATGGCAT
ACCAATGCCAAGGACAGCTAAAGATTCAAATGCAGAAGTATCCATTCCAGTACTTGACACAGTAAGTTCAAAAGGCAATTCAAAAACAGGGCCTCTTCTTTCTTCTAATC
CTACAGAGATGGGAATCCATTTGACAGGAATAGCAAACGCAAAGCAAAAGCTACAGAGAACACTTTCGGAGAAATACGGGATTGGATCGGCAGTCACGAATGTTCCTAAA
GGGCATTTCGCAGTGTACGTAGGAGAAACTAGGAAGAAGAGATTTGTTATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTGGCGGAAGAGGA
ATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGACTACTTCATCAGCTTAACTTCATCCCTAAATTGTTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTGCCTACCCACACCAACCGAGATGGAAGCTCGCAATCCCTCCCTAATCCCACACGACTTCGATCCTTCCAGTGGAGAACTAGATCATGGTATTGAACATGGCAT
ACCAATGCCAAGGACAGCTAAAGATTCAAATGCAGAAGTATCCATTCCAGTACTTGACACAGTAAGTTCAAAAGGCAATTCAAAAACAGGGCCTCTTCTTTCTTCTAATC
CTACAGAGATGGGAATCCATTTGACAGGAATAGCAAACGCAAAGCAAAAGCTACAGAGAACACTTTCGGAGAAATACGGGATTGGATCGGCAGTCACGAATGTTCCTAAA
GGGCATTTCGCAGTGTACGTAGGAGAAACTAGGAAGAAGAGATTTGTTATTCCGATATCGTACCTGAATCATCCATTGTTCAAGGATTTGCTGAACCTGGCGGAAGAGGA
ATTTGGATTCGATCATCCAATGGGCGGCCTCACGATTCCTTGCAGCGAAGACTACTTCATCAGCTTAACTTCATCCCTAAATTGTTCATAA
Protein sequenceShow/hide protein sequence
MDCLPTPTEMEARNPSLIPHDFDPSSGELDHGIEHGIPMPRTAKDSNAEVSIPVLDTVSSKGNSKTGPLLSSNPTEMGIHLTGIANAKQKLQRTLSEKYGIGSAVTNVPK
GHFAVYVGETRKKRFVIPISYLNHPLFKDLLNLAEEEFGFDHPMGGLTIPCSEDYFISLTSSLNCS