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CmoCh19G007290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionauxin-responsive protein SAUR15-like
Genome locationCmo_Chr19:7550787..7551083
RNA-Seq ExpressionCmoCh19G007290
SyntenyCmoCh19G007290
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572093.1 hypothetical protein SDJN03_28821, partial [Cucurbita argyrosperma subsp. sororia]2.8e-50100Show/hide
Query:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
Subjt:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN

XP_022928472.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]3.4e-3578.43Show/hide
Query:  MGI-LPEIIHHARQITHRSAS---SHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSG
        MGI LPEII HA+QITHR        HR   SDVPKGHFVVYVGE+E+ERKRFVVPLSYLKNPLFQELLS+AAEEFGFEHQ GGI IPCA DHFL LTS 
Subjt:  MGI-LPEIIHHARQITHRSAS---SHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSG

Query:  LN
        LN
Subjt:  LN

XP_022952481.1 auxin-responsive protein SAUR15-like [Cucurbita moschata]1.4e-36100Show/hide
Query:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ
        MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ
Subjt:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ

XP_023511423.1 auxin-responsive protein SAUR15-like isoform X1 [Cucurbita pepo subsp. pepo]6.2e-3795.12Show/hide
Query:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIM
        MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ   +M
Subjt:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIM

XP_023511424.1 auxin-responsive protein SAUR15-like isoform X2 [Cucurbita pepo subsp. pepo]1.4e-36100Show/hide
Query:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ
        MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ
Subjt:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ

TrEMBL top hitse value%identityAlignment
A0A0A0K2G9 Uncharacterized protein2.6e-3372.48Show/hide
Query:  MGI-LPEIIHHARQITHRSAS-SH---------HRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDH
        MGI LPEII HA+QITHR+A+ SH         HRS  SDVPKGHFVVYVGEEE++RKRFVVPLSYLKNPLFQELLS+AA+EFGF++  GGI IPCA D 
Subjt:  MGI-LPEIIHHARQITHRSAS-SH---------HRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDH

Query:  FLSLTSGLN
        FL LTS LN
Subjt:  FLSLTSGLN

A0A1S3BJM3 auxin-responsive protein SAUR21-like7.6e-3370.64Show/hide
Query:  MGI-LPEIIHHARQITHRSASSHH----------RSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDH
        MGI  PEII HA+QITHR A+  H          RS  SDVPKGHFVVYVGEEE++RKRFVVPLSYLKNPLFQELLS+AA+EFGF++Q GGI IPCA D 
Subjt:  MGI-LPEIIHHARQITHRSASSHH----------RSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDH

Query:  FLSLTSGLN
        FL LTS LN
Subjt:  FLSLTSGLN

A0A6J1EK13 auxin-responsive protein SAUR21-like1.6e-3578.43Show/hide
Query:  MGI-LPEIIHHARQITHRSAS---SHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSG
        MGI LPEII HA+QITHR        HR   SDVPKGHFVVYVGE+E+ERKRFVVPLSYLKNPLFQELLS+AAEEFGFEHQ GGI IPCA DHFL LTS 
Subjt:  MGI-LPEIIHHARQITHRSAS---SHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSG

Query:  LN
        LN
Subjt:  LN

A0A6J1GKC2 auxin-responsive protein SAUR15-like6.6e-37100Show/hide
Query:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ
        MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ
Subjt:  MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQ

A0A6J1JMM0 auxin-responsive protein SAUR21-like3.6e-3578.43Show/hide
Query:  MGI-LPEIIHHARQITHRSAS---SHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSG
        MGI LPEII HA+QITHR        HR   SDVPKGHFVVYVGE+E ERKRFVVPLSYLKNPLFQELLS+AAEEFGFEHQ GGI IPCA DHFL LTS 
Subjt:  MGI-LPEIIHHARQITHRSAS---SHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSG

Query:  LN
        LN
Subjt:  LN

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG72.5e-1753.09Show/hide
Query:  SASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        SA +   S   D PKG+  VYVGE     KRFV+P+S+L  PLFQ+LLSQA EEFG++H +GG+ IPC+ D F  +TS L+
Subjt:  SASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN

P33079 Auxin-induced protein 10A51.1e-1757.14Show/hide
Query:  DVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        DVPKG+  VYVG   D+ +RF +P+SYL  P FQELLSQA EEFG++H +GG+ IPC  + FL++T+ LN
Subjt:  DVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN

P33080 Auxin-induced protein X10A3.0e-1852.5Show/hide
Query:  ASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        A++   S   +VPKG+ VVYVG   D+ +RF++P+SYL  P FQ+LL+QA EEFG++H +GG+ IPC  D FL++TS LN
Subjt:  ASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN

P33081 Auxin-induced protein 15A6.7e-1856.76Show/hide
Query:  SGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        S  +D PKG+  VYVGE   + KRFV+P+SYL  P FQ+LLSQA EEFG++H +GG+ IPC+ D F  +TS LN
Subjt:  SGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN

Q41220 Auxin-responsive protein SAUR151.5e-1748.24Show/hide
Query:  ARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTS
        A+QI  R +SS         P+G   VYVGE + ++KR+VVP+SYL  PLFQ+LLS++ EEFG++H +GG+ IPC    F ++TS
Subjt:  ARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTS

Arabidopsis top hitse value%identityAlignment
AT4G34770.1 SAUR-like auxin-responsive protein family3.9e-2155.17Show/hide
Query:  RQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        R ++ R AS    SG ++VPKGH  VYVGE    RKRFV+P+SYL +PLFQ LL+ A EEFGF+H +GG+ IPC  D+F +L S L+
Subjt:  RQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN

AT4G34780.1 SAUR-like auxin-responsive protein family8.1e-1962.32Show/hide
Query:  DVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGL
        +V KGHF VYVGE+E E KRFVVP+SYL +PLFQ LL +A +EFG +HQ   + IPCA D FL +TS L
Subjt:  DVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGL

AT4G34790.1 SAUR-like auxin-responsive protein family2.8e-1946.6Show/hide
Query:  MGILPEIIHHARQITHRSASSHHRSGCSD----------VPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHF
        MG++  ++ +A+QI  +S S  +++G S           VPKGH  VYVGE+  E+KRFVVP+SYL +PLF+E L++A EE GF H +GG+ IPC  + F
Subjt:  MGILPEIIHHARQITHRSASSHHRSGCSD----------VPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHF

Query:  LSL
        L L
Subjt:  LSL

AT4G34800.1 SAUR-like auxin-responsive protein family1.2e-1962.12Show/hide
Query:  SDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSL
        S VPKGH  VYVGEE + +KRFVVP+SYL +P FQ LLS+A EEFGF H +GG+ IPC  + F+ L
Subjt:  SDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSL

AT4G38840.1 SAUR-like auxin-responsive protein family4.3e-2047.42Show/hide
Query:  LPEIIHHARQITHRS--ASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN
        +P ++  ++QI  ++   SS   S   DVPKG+  VYVGE+    KRFVVP+SYL  P FQ+LL +A EEFGF+H +GG+ IPC+ + F+ L S  N
Subjt:  LPEIIHHARQITHRS--ASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTCTACCGGAGATCATTCATCACGCAAGGCAAATAACTCACCGATCAGCGTCGTCGCACCACCGATCGGGTTGTTCGGATGTTCCGAAAGGCCATTTTGTGGT
GTATGTTGGGGAGGAAGAAGATGAGAGGAAGCGATTTGTGGTGCCATTGTCGTACTTGAAGAATCCCCTGTTTCAAGAACTGTTGAGCCAAGCTGCTGAAGAGTTTGGAT
TTGAGCATCAGGTTGGTGGGATTATGATACCTTGTGCGCACGATCATTTTCTGAGTTTAACTTCTGGATTGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTCTACCGGAGATCATTCATCACGCAAGGCAAATAACTCACCGATCAGCGTCGTCGCACCACCGATCGGGTTGTTCGGATGTTCCGAAAGGCCATTTTGTGGT
GTATGTTGGGGAGGAAGAAGATGAGAGGAAGCGATTTGTGGTGCCATTGTCGTACTTGAAGAATCCCCTGTTTCAAGAACTGTTGAGCCAAGCTGCTGAAGAGTTTGGAT
TTGAGCATCAGGTTGGTGGGATTATGATACCTTGTGCGCACGATCATTTTCTGAGTTTAACTTCTGGATTGAACTGA
Protein sequenceShow/hide protein sequence
MGILPEIIHHARQITHRSASSHHRSGCSDVPKGHFVVYVGEEEDERKRFVVPLSYLKNPLFQELLSQAAEEFGFEHQVGGIMIPCAHDHFLSLTSGLN