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CmoCh19G007460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G007460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr19:7644917..7646933
RNA-Seq ExpressionCmoCh19G007460
SyntenyCmoCh19G007460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572110.1 hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]7.7e-4691.59Show/hide
Query:  MDCFIVCGVSRQAMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAEMKELEKAHA
        MDCF+VCGVSRQAMRIQADNNKRKVKKVVRDGIV+DETPTTTKGKKWQRRRRRVGDNER     ETSRLQRT+GGRVESGGWLAAWLEEAEMKELEKAHA
Subjt:  MDCFIVCGVSRQAMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAEMKELEKAHA

Query:  KGVENLR
        KG+ENLR
Subjt:  KGVENLR

KAG6589009.1 hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0442.39Show/hide
Query:  MDCFIV-CGVSRQAMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAE
        M CF + CG SRQ  RIQ D+  +K  +  +D   +DE P     ++  + ++RV   ER+T +     L+R  GG+ ES GWLAAWLEEAE
Subjt:  MDCFIV-CGVSRQAMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAE

KAG7011763.1 Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]2.6e-3891.58Show/hide
Query:  AMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAEMKELEKAHAKGVENLR
        AMRIQADNNKRKVKKVVRDGIV+DETPTTTKGKKWQRRRRRVGDNER     ETSRLQRT+GGRVESGGWLAAWLEEAEMKELEKAHAKG+ENLR
Subjt:  AMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAEMKELEKAHAKGVENLR

KGN43248.1 hypothetical protein Csa_020351 [Cucumis sativus]3.4e-0948.11Show/hide
Query:  MDCFIV-CGVSRQAMRIQADNNKRKVKKVVR-DGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEA-------E
        M+CF+  CG   Q +RI+ D + RK +K+ R D IVI E P T K  +  +  RRV   ER+     +SRLQR++  RVE GGWLAAWLEEA       E
Subjt:  MDCFIV-CGVSRQAMRIQADNNKRKVKKVVR-DGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEA-------E

Query:  MKELEK
        +KELEK
Subjt:  MKELEK

TrEMBL top hitse value%identityAlignment
A0A0A0K1A5 Uncharacterized protein1.6e-0948.11Show/hide
Query:  MDCFIV-CGVSRQAMRIQADNNKRKVKKVVR-DGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEA-------E
        M+CF+  CG   Q +RI+ D + RK +K+ R D IVI E P T K  +  +  RRV   ER+     +SRLQR++  RVE GGWLAAWLEEA       E
Subjt:  MDCFIV-CGVSRQAMRIQADNNKRKVKKVVR-DGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEA-------E

Query:  MKELEK
        +KELEK
Subjt:  MKELEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGTTTCATTGTTTGTGGCGTATCACGTCAAGCGATGAGAATTCAGGCAGATAACAACAAGAGAAAGGTAAAGAAAGTTGTAAGAGATGGCATTGTCATCGATGA
GACGCCTACGACAACGAAAGGCAAGAAATGGCAACGACGTCGGAGACGGGTGGGCGATAACGAGAGAGAAACGGCGGCGGAAGAGACGTCGAGACTACAACGAACCGAAG
GAGGGAGAGTTGAGTCGGGTGGGTGGCTTGCAGCATGGTTGGAAGAGGCTGAAATGAAGGAGTTGGAGAAGGCGCATGCAAAGGGCGTAGAAAATTTAAGGGTTAATTTC
AAATGCTTCGGTTTCTGTTCGATTGTAGGCTGTTCGAATGATTTCTGTGGCGGTTTTGTCGAGTCCAGGAATTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTGTTTCATTGTTTGTGGCGTATCACGTCAAGCGATGAGAATTCAGGCAGATAACAACAAGAGAAAGGTAAAGAAAGTTGTAAGAGATGGCATTGTCATCGATGA
GACGCCTACGACAACGAAAGGCAAGAAATGGCAACGACGTCGGAGACGGGTGGGCGATAACGAGAGAGAAACGGCGGCGGAAGAGACGTCGAGACTACAACGAACCGAAG
GAGGGAGAGTTGAGTCGGGTGGGTGGCTTGCAGCATGGTTGGAAGAGGCTGAAATGAAGGAGTTGGAGAAGGCGCATGCAAAGGGCGTAGAAAATTTAAGGGTTAATTTC
AAATGCTTCGGTTTCTGTTCGATTGTAGGCTGTTCGAATGATTTCTGTGGCGGTTTTGTCGAGTCCAGGAATTGGTAG
Protein sequenceShow/hide protein sequence
MDCFIVCGVSRQAMRIQADNNKRKVKKVVRDGIVIDETPTTTKGKKWQRRRRRVGDNERETAAEETSRLQRTEGGRVESGGWLAAWLEEAEMKELEKAHAKGVENLRVNF
KCFGFCSIVGCSNDFCGGFVESRNW