; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G008440 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G008440
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCmo_Chr19:8217615..8218709
RNA-Seq ExpressionCmoCh19G008440
SyntenyCmoCh19G008440
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572199.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-17599.38Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFAN+GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQ SESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHT
        TFVGLIDELCKEKGVDEAHT
Subjt:  TFVGLIDELCKEKGVDEAHT

KAG7011839.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-20198.35Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFS+SEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFAN+GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQ SESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEK DEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLR+FLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

XP_022952706.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]1.1e-203100Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]1.2e-19495.88Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRH EGS SRFAN+GPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQ SESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAE LDEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LR+FLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

XP_023554525.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo]2.3e-19897.8Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGE SAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFAN+GPMSR RNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQ SESMQG+QSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKG DEAHTVIETLKQKGFLINEK LR+FLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

TrEMBL top hitse value%identityAlignment
A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381501.1e-14879.17Show/hide
Query:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF
        Q QSRL+VSKILSS+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SEPR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRF
Subjt:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF

Query:  NRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL
        NRHSEGSSSRF N+G  SR R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA +SESMQ K QSQ Q PP ADEIFRKMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQN GISPNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG

Query:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        LID LC EKGVDEAH V+ET KQKGFLI+EK LR+FLNKRAPFSP IW++ FG K   FF
Subjt:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

A0A5D3D5J5 Pentatricopeptide repeat-containing protein1.1e-14879.17Show/hide
Query:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF
        Q QSRL+VSKILSS+IR WE  FPLLH+PLRTPD SLSP  SR FSSNSMDDD  FS SEPR++PPQRR PPD REARRVP+  G V+  Y  DNRNQRF
Subjt:  QLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRF

Query:  NRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL
        NRHSEGSSSRF N+G  SR R+ESLSQKDFSFLEKFKLNTDNQS+  EK E  SSSA +SESMQ K QSQ Q PP ADEIFRKMKE+GLIPNAVAMLDGL
Subjt:  NRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEP-SSSAQISESMQGK-QSQPQCPPEADEIFRKMKETGLIPNAVAMLDGL

Query:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG
        CKDGLIQEAMKLF LIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQN GISPNAFS+G+LIQGLYK K+L+DAV+FC EMLESGH PNLTTFVG
Subjt:  CKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVG

Query:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        LID LC EKGVDEAH V+ET KQKGFLI+EK LR+FLNKRAPFSP IW++ FG K   FF
Subjt:  LIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

A0A6J1C2J3 pentatricopeptide repeat-containing protein At4g381509.7e-15879.12Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        M ALQ+QLQSRLR+SKI+SS+I   ER  PLLHD LRT D SL P +SRCFSSNSMDDDW  S SEPRS+PP RRSPPD RE RRVPKF+  VSA YP D
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        +RN+R N+ SEGSS RF N+G +SR R+E LSQKDFSFLEKFKLNTDNQS+S EK E SS+ + SES+Q KQSQPQ PPEADEIF+KMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQ NGISPNAFS+G+LIQGLYK  +LE+A+ FCIEMLESGHSPN+T
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        T VGL+DELCKE+G +EA +VIETLKQKGFL+NEK LR+FLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

A0A6J1GKZ0 pentatricopeptide repeat-containing protein At4g38150-like5.2e-204100Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like5.8e-19595.88Show/hide
Query:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
        MGALQMQLQSRLRVSKIL STIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED
Subjt:  MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPED

Query:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
        NRNQRFNRH EGS SRFAN+GPMSR R+ESLSQKDFSFLEKFKLNTDN STSTEK EPSSSAQ SESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM
Subjt:  NRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAE LDEAIRIFRKMQNNGISPNAFSYG+LIQGLYK K+LEDAVSFCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT

Query:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF
        TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEK LR+FLNKRAPFSPHIWELIFGKKTKEFF
Subjt:  TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial1.5e-2234.39Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ ++  LI G  K
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN
        +  ++DA      M+++G SPN+ T+  LID LCKE  +D A+ ++  + + G   N
Subjt:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial5.7e-2230.46Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ +++ +CKA+++D+ +R+FR++ + G+ PN  +Y  L+ G  +
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQ
        S +L  A     EM+  G  P++ T+  L+D LC    +++A  + E +++
Subjt:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQ

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461003.3e-2236Show/hide
Query:  EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQ
        +IF +M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT++++G C ++ +DEA+R   +M++ GI PN F+Y  L+ GL K  +
Subjt:  EIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQ

Query:  LEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG
           A+     M+  G  PN+ T+  LI  LCKE+ + EA  +++ +  +G
Subjt:  LEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG

Q9LPX2 Pentatricopeptide repeat-containing protein At1g12775, mitochondrial2.6e-2234.87Show/hide
Query:  ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKS
        A E+ RKM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ GFC A + D+  ++ R M    ISPN  ++ +LI    K 
Subjt:  ADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKS

Query:  KQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG
         +L +A     EM++ G +PN  T+  LID  CKE  ++EA  +++ +  KG
Subjt:  KQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381509.9e-7556.55Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIP
        P P  NR  R  R S       A         + +LS  D  FLE+FKL  +  S  T K E           Q  Q     P ++DEIF+KMKE GLIP
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIP

Query:  NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGH
        NAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVV+YTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFSYG+L+QGLY    L+DAV+FC EMLESGH
Subjt:  NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGH

Query:  SPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKE
        SPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N K +++F++KRAPF    WE IF KK  E
Subjt:  SPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKE

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.1e-2334.39Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ ++  LI G  K
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN
        +  ++DA      M+++G SPN+ T+  LID LCKE  +D A+ ++  + + G   N
Subjt:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein1.1e-2334.39Show/hide
Query:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK
        EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ ++  LI G  K
Subjt:  EADEIFRKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYK

Query:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN
        +  ++DA      M+++G SPN+ T+  LID LCKE  +D A+ ++  + + G   N
Subjt:  SKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLIN

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein7.0e-7656.55Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIP
        P P  NR  R  R S       A         + +LS  D  FLE+FKL  +  S  T K E           Q  Q     P ++DEIF+KMKE GLIP
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIP

Query:  NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGH
        NAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVV+YTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFSYG+L+QGLY    L+DAV+FC EMLESGH
Subjt:  NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGH

Query:  SPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKE
        SPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N K +++F++KRAPF    WE IF KK  E
Subjt:  SPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKE

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein7.0e-7656.55Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIP
        P P  NR  R  R S       A         + +LS  D  FLE+FKL  +  S  T K E           Q  Q     P ++DEIF+KMKE GLIP
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIP

Query:  NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGH
        NAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVV+YTAVV+ FCKA K+++A RIFRKMQNNGI+PNAFSYG+L+QGLY    L+DAV+FC EMLESGH
Subjt:  NAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGH

Query:  SPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKE
        SPN+ TFV L+D LC+ KGV++A + I+TL QKGF +N K +++F++KRAPF    WE IF KK  E
Subjt:  SPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKTKE

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein4.9e-2929.34Show/hide
Query:  DLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPY-----PEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQK
        D++ S +    FS       +  S S   SSP    +    +E +   +F+  + A +     PE    + F R    S+S F         R  S   K
Subjt:  DLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPY-----PEDNRNQRFNRHSEGSSSRFANDGPMSRPRNESLSQK

Query:  DFSFLEKFKLNTDNQSTSTE--------KIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTI
          +    F L+ D+    TE        K EP        S +    +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +
Subjt:  DFSFLEKFKLNTDNQSTSTE--------KIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTI

Query:  PEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGL-YKSKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETL
        P+VV +TA+V+ +  A +  E +++F +M  +G+SPNA++Y +LI+GL    K  +DA  + +EM+ +G SPN  T+  + +   +E   + A  +++ +
Subjt:  PEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGL-YKSKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETL

Query:  KQKGFLINEKDLRDFLN-KRAPFSPHIWELIFGK
        K KGF+ +EK +R+ L  KR      +  L+F K
Subjt:  KQKGFLINEKDLRDFLN-KRAPFSPHIWELIFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCGTTGCAGATGCAATTACAATCTCGCCTTCGAGTTTCGAAGATTTTGTCTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCG
AACGCCGGATTTGTCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAGGTCCGAGCCGAGAAGCAGCCCGCCGCAAC
GACGTTCTCCCCCGGATCCTCGGGAAGCTCGTCGAGTTCCTAAATTCGCCGGGGAAGTATCTGCTCCTTACCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTCG
GAAGGTTCCTCGTCCCGATTCGCAAACGATGGGCCGATGTCGCGGCCAAGGAATGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGA
CAATCAGAGCACTAGTACAGAGAAAATCGAGCCGAGCTCTTCTGCTCAGATTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAAGCGGATGAGA
TATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTAGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATT
CGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAA
TAATGGCATTTCTCCCAATGCCTTCAGTTACGGCATCTTGATACAGGGACTGTACAAATCCAAACAATTAGAGGATGCCGTATCATTTTGCATTGAGATGTTAGAATCTG
GGCATTCTCCAAATCTAACGACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTC
TTGATTAATGAGAAAGATTTAAGAGACTTCTTGAATAAAAGAGCCCCATTTTCTCCACATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCGTTGCAGATGCAATTACAATCTCGCCTTCGAGTTTCGAAGATTTTGTCTTCAACAATTCGGAATTGGGAAAGAGGCTTTCCTCTGCTCCATGATCCATTGCG
AACGCCGGATTTGTCACTCTCGCCGGTGGAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGAACTTCTCAAGGTCCGAGCCGAGAAGCAGCCCGCCGCAAC
GACGTTCTCCCCCGGATCCTCGGGAAGCTCGTCGAGTTCCTAAATTCGCCGGGGAAGTATCTGCTCCTTACCCTGAGGATAATCGGAATCAACGGTTTAATAGGCATTCG
GAAGGTTCCTCGTCCCGATTCGCAAACGATGGGCCGATGTCGCGGCCAAGGAATGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAACACTGA
CAATCAGAGCACTAGTACAGAGAAAATCGAGCCGAGCTCTTCTGCTCAGATTTCTGAATCAATGCAGGGGAAGCAATCGCAACCACAGTGTCCTCCAGAAGCGGATGAGA
TATTCAGGAAAATGAAGGAAACTGGTCTAATTCCCAACGCTGTTGCTATGCTAGATGGGCTTTGCAAAGATGGGCTTATCCAAGAAGCAATGAAACTATTTGGTTTGATT
CGTGAGAAGGGTACAATTCCAGAAGTTGTGGTTTACACTGCTGTTGTTGATGGGTTTTGCAAGGCCGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAA
TAATGGCATTTCTCCCAATGCCTTCAGTTACGGCATCTTGATACAGGGACTGTACAAATCCAAACAATTAGAGGATGCCGTATCATTTTGCATTGAGATGTTAGAATCTG
GGCATTCTCCAAATCTAACGACTTTTGTCGGCCTAATTGATGAGTTATGCAAAGAAAAGGGGGTGGACGAAGCTCATACTGTCATAGAAACCTTAAAACAAAAGGGATTC
TTGATTAATGAGAAAGATTTAAGAGACTTCTTGAATAAAAGAGCCCCATTTTCTCCACATATCTGGGAACTAATCTTCGGGAAGAAAACGAAGGAATTTTTCTGA
Protein sequenceShow/hide protein sequence
MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDWNFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHS
EGSSSRFANDGPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPEADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLI
REKGTIPEVVVYTAVVDGFCKAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLTTFVGLIDELCKEKGVDEAHTVIETLKQKGF
LINEKDLRDFLNKRAPFSPHIWELIFGKKTKEFF