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CmoCh19G008710 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G008710
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionsodium/potassium/calcium exchanger 1-like
Genome locationCmo_Chr19:8380690..8381208
RNA-Seq ExpressionCmoCh19G008710
SyntenyCmoCh19G008710
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572225.1 hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia]2.5e-7094.92Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAES GAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQ-----EEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQEESERLV EEE+QQEHEEQEEQ     EE+EEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQ-----EEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

KAG6589100.1 hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3967.44Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AE+L A+M D ++ IE KVED EER NG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
         I  ++ EESER + E+++  + E            EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

KAG7011863.1 hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-7297.67Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAES GAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQEESERLV EEE+QQEHEEQEEQEE+EEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

XP_022969273.1 sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]9.1e-6894.77Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAE+LGAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQ ESERLV EEE+QQEHE  EEQEE++ EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

XP_023530308.1 uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]8.0e-4067.44Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AE+L AAM D ++ IE KVED EER NG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
         I  ++ EESER + E+++             +++ EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

TrEMBL top hitse value%identityAlignment
A0A0A0K349 Uncharacterized protein3.3e-3161.85Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAA-MEDSTTIIERKVEDGEEREN
        MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++  E+  G+     E+LGAA M D    IE KVE  EER N
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAA-MEDSTTIIERKVEDGEEREN

Query:  GFIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        G +  E  ++ E L+ + E ++E     E+EE+EE         +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Subjt:  GFIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

A0A1S3CG16 gem-associated protein 2-like4.4e-2861.9Show/hide
Query:  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGA-AMEDSTTIIERK--VEDGEERENGFIAEEEQEE
        MVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++  EQ     S   E+LGA  M D    IE K  VE  EER NG +  EE+ E
Subjt:  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGA-AMEDSTTIIERK--VEDGEERENGFIAEEEQEE

Query:  SERLVKEEEEQ-----QEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        +     E+EE+     +E EE+EE+EE+EEE EE+    +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Subjt:  SERLVKEEEEQ-----QEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

A0A6J1C4P4 ATP-dependent RNA helicase MAK55.2e-3766.08Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  SG EQ GG G                 +E KVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI
         +A  EQEESE+L+ E+E   EHEE+EE+EE++      G LSNEEL++K EEFIRKMKA IK E QQVL+
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI

A0A6J1EJY9 uncharacterized protein LOC1114352601.1e-3966.86Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS SG    GG  SR AE+L A+M D ++ IE KVED EER NG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
         I  ++ EESER + E+++           + +++ EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

A0A6J1I0H9 sodium/potassium/calcium exchanger 1-like4.4e-6894.77Show/hide
Query:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG
        MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAE+LGAAMEDSTTIIERKVEDGEERENG
Subjt:  MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENG

Query:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
        FIAEEEQ ESERLV EEE+QQEHE  EEQEE++ EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Subjt:  FIAEEEQEESERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCACAAAAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTG
AATCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAGAAAGT
GAAAGATTGGTTAAAGAAGAAGAAGAGCAACAAGAACACGAAGAACAAGAAGAACAAGAAGAACAAGAAGAAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATT
GGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTTGAATCACAGCAAGTGCTTATTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCACAAAAA
CTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTG
AATCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAGAAAGT
GAAAGATTGGTTAAAGAAGAAGAAGAGCAACAAGAACACGAAGAACAAGAAGAACAAGAAGAACAAGAAGAAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATT
GGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTTGAATCACAGCAAGTGCTTATTTTGTAA
Protein sequenceShow/hide protein sequence
MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAESLGAAMEDSTTIIERKVEDGEERENGFIAEEEQEES
ERLVKEEEEQQEHEEQEEQEEQEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL