; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G008740 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G008740
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionF-box domain-containing protein
Genome locationCmo_Chr19:8391168..8391647
RNA-Seq ExpressionCmoCh19G008740
SyntenyCmoCh19G008740
Gene Ontology termsGO:0009937 - regulation of gibberellic acid mediated signaling pathway (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily
IPR044184 - F-box protein SNE


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572228.1 F-box protein SNE, partial [Cucurbita argyrosperma subsp. sororia]2.9e-8499.36Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSP LSSVRPLILALGGYKRLYMLCLRPV
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKP
        LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKP
Subjt:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKP
KAG7011864.1 F-box protein SNE, partial [Cucurbita argyrosperma subsp. argyrosperma]5.2e-8699.37Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSP LSSVRPLILALGGYKRLYMLCLRPV
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
Subjt:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
XP_022136160.1 F-box protein SNE-like [Momordica charantia]2.7e-5874.53Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQ NA + + K K   K  KFSINDHLD+LTEIL+RLDGPSLCAAACVCRLWCALARNDDSLWEHLC RH SSPP S++R ++LALGGYKRLYMLCLRP+
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLN--RSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        L+  N  RS  V RV TLQD +Q LSLSLF VD YER+G + GDAAAAAPSLRFLCKPVNV
Subjt:  LSRLN--RSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
XP_022952371.1 F-box protein SNE-like [Cucurbita moschata]4.7e-87100Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
Subjt:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
XP_022969281.1 F-box protein SNE-like [Cucurbita maxima]3.1e-8699.37Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCF HVSSPPLSSVRPLILALGGYKRLYMLCLRPV
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
Subjt:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
TrEMBL top hitse value%identityAlignment
A0A5N6RCK8 F-box domain-containing protein1.3e-5073.83Show/hide
Query:  KRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNRSGLV
        K +   KK KF INDH DILTEILKRLDGPSL  AACVCRLWCA+ARN DSLWEHLCFRHV+SPP SSVRP++LALGGYKRLYM+C+RPVL+RL  S LV
Subjt:  KRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNRSGLV

Query:  PRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
         R    +D+VQ LSLSLFCVDYYER   LGG   A+A SL FLCKPVNV
Subjt:  PRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
A0A6J1C339 F-box protein SNE-like1.3e-5874.53Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQ NA + + K K   K  KFSINDHLD+LTEIL+RLDGPSLCAAACVCRLWCALARNDDSLWEHLC RH SSPP S++R ++LALGGYKRLYMLCLRP+
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLN--RSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        L+  N  RS  V RV TLQD +Q LSLSLF VD YER+G + GDAAAAAPSLRFLCKPVNV
Subjt:  LSRLN--RSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
A0A6J1GK18 F-box protein SNE-like2.3e-87100Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
Subjt:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
A0A6J1HXD0 F-box protein SNE-like1.5e-8699.37Show/hide
Query:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV
        MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCF HVSSPPLSSVRPLILALGGYKRLYMLCLRPV
Subjt:  MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPV

Query:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
        LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
Subjt:  LSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV
A0A6P4BI13 F-box protein SNE1.1e-4970.25Show/hide
Query:  PQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLN
        PQ +       K+ +F INDH+DIL EILKRLDGPSL AAACVCRLWCA+ RN DSLWEHLCFRHVSSPP SSVRP+++ALGGYKRLYM+C+R VLSRL 
Subjt:  PQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLN

Query:  RSGLVPRVRTLQDQVQRLSLSLFCVDYYER----NGWLGGDAAAAAPSLRFLCKPVNV
         S LV RV T  D+VQ LSLSLFCVDYYER    +G LGG  A+A+ SL FLCKPVNV
Subjt:  RSGLVPRVRTLQDQVQRLSLSLFCVDYYER----NGWLGGDAAAAAPSLRFLCKPVNV
SwissProt top hitse value%identityAlignment
Q7XAK4 F-box protein GID22.0e-1138.6Show/hide
Query:  DILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLS--SVRPLILALGGYKRLYMLCLRPVLSR-----LNRSGLVPRVRTLQDQV
        D++ E+L+R +  +L AAACV R W  LA  D+ LWE  C R  ++   S   +R ++L+LGG++RL+ + +RP+  R       +    P VR  +DQV
Subjt:  DILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLS--SVRPLILALGGYKRLYMLCLRPVLSR-----LNRSGLVPRVRTLQDQV

Query:  QRLSLSLFCVDYYE
        Q LSLSLF + +++
Subjt:  QRLSLSLFCVDYYE
Q9LUB6 F-box protein SNE7.2e-3856.41Show/hide
Query:  QGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNR
        + + KR+  ++   FSINDH D+L EIL+RLDG SLC+AACVCRLW A+ARN DS+WE LCFR VS  P  S+R ++ ALGGY+ LY LC+RPVL+RL  
Subjt:  QGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNR

Query:  SGLVPRVRTLQDQVQRLSLSLFCVDYYER---NGWLGGDAAAAAPSLRFLCKPVNV
            P++   +DQ+Q LSLSL+CV YYER     WLG    A   SL FL KPVNV
Subjt:  SGLVPRVRTLQDQVQRLSLSLFCVDYYER---NGWLGGDAAAAAPSLRFLCKPVNV
Q9STX3 F-box protein GID22.0e-1135.77Show/hide
Query:  GDTKRKNNSK-------KIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPL--SSVRPLILALGGYKRLYMLCLR
        GD   + N K       +I FS  D  +++ E+LK +D  +L  ++CV ++W   A+ D+ LWE +C RH ++     + +R ++LALGG++RL+ L L 
Subjt:  GDTKRKNNSK-------KIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPL--SSVRPLILALGGYKRLYMLCLR

Query:  PVLSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYER
        P LS+ N     PR R  +D++ +L+LSL  + YYE+
Subjt:  PVLSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYER
Arabidopsis top hitse value%identityAlignment
AT4G24210.1 F-box family protein1.4e-1235.77Show/hide
Query:  GDTKRKNNSK-------KIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPL--SSVRPLILALGGYKRLYMLCLR
        GD   + N K       +I FS  D  +++ E+LK +D  +L  ++CV ++W   A+ D+ LWE +C RH ++     + +R ++LALGG++RL+ L L 
Subjt:  GDTKRKNNSK-------KIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPL--SSVRPLILALGGYKRLYMLCLR

Query:  PVLSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYER
        P LS+ N     PR R  +D++ +L+LSL  + YYE+
Subjt:  PVLSRLNRSGLVPRVRTLQDQVQRLSLSLFCVDYYER
AT5G48170.1 F-box family protein5.1e-3956.41Show/hide
Query:  QGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNR
        + + KR+  ++   FSINDH D+L EIL+RLDG SLC+AACVCRLW A+ARN DS+WE LCFR VS  P  S+R ++ ALGGY+ LY LC+RPVL+RL  
Subjt:  QGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNR

Query:  SGLVPRVRTLQDQVQRLSLSLFCVDYYER---NGWLGGDAAAAAPSLRFLCKPVNV
            P++   +DQ+Q LSLSL+CV YYER     WLG    A   SL FL KPVNV
Subjt:  SGLVPRVRTLQDQVQRLSLSLFCVDYYER---NGWLGGDAAAAAPSLRFLCKPVNV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCAAATGCACCACAGGGAGATACCAAACGCAAGAACAACAGCAAGAAAATCAAATTCTCAATCAACGATCACCTCGATATCCTCACCGAAATCCTCAAGCGACT
CGACGGTCCTTCCCTCTGCGCCGCCGCCTGCGTCTGCCGTCTCTGGTGTGCCCTAGCTCGCAACGACGATTCGCTCTGGGAGCATCTCTGTTTCCGTCACGTCTCCTCTC
CGCCTCTCTCTTCCGTCCGTCCTCTCATCCTCGCTCTCGGCGGCTACAAGAGACTCTACATGCTCTGCCTTCGTCCCGTCCTCTCCCGATTGAATCGCTCCGGTTTGGTC
CCCCGCGTACGGACTCTCCAAGATCAGGTACAGCGACTCTCGCTCTCCTTGTTCTGCGTCGATTATTACGAGAGAAACGGTTGGCTCGGCGGCGATGCGGCCGCCGCGGC
TCCGTCGCTGCGGTTCCTCTGCAAACCGGTGAACGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCCAAATGCACCACAGGGAGATACCAAACGCAAGAACAACAGCAAGAAAATCAAATTCTCAATCAACGATCACCTCGATATCCTCACCGAAATCCTCAAGCGACT
CGACGGTCCTTCCCTCTGCGCCGCCGCCTGCGTCTGCCGTCTCTGGTGTGCCCTAGCTCGCAACGACGATTCGCTCTGGGAGCATCTCTGTTTCCGTCACGTCTCCTCTC
CGCCTCTCTCTTCCGTCCGTCCTCTCATCCTCGCTCTCGGCGGCTACAAGAGACTCTACATGCTCTGCCTTCGTCCCGTCCTCTCCCGATTGAATCGCTCCGGTTTGGTC
CCCCGCGTACGGACTCTCCAAGATCAGGTACAGCGACTCTCGCTCTCCTTGTTCTGCGTCGATTATTACGAGAGAAACGGTTGGCTCGGCGGCGATGCGGCCGCCGCGGC
TCCGTCGCTGCGGTTCCTCTGCAAACCGGTGAACGTATAA
Protein sequenceShow/hide protein sequence
MQPNAPQGDTKRKNNSKKIKFSINDHLDILTEILKRLDGPSLCAAACVCRLWCALARNDDSLWEHLCFRHVSSPPLSSVRPLILALGGYKRLYMLCLRPVLSRLNRSGLV
PRVRTLQDQVQRLSLSLFCVDYYERNGWLGGDAAAAAPSLRFLCKPVNV