; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G008950 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G008950
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtochlorophyllide reductase
Genome locationCmo_Chr19:8466067..8466390
RNA-Seq ExpressionCmoCh19G008950
SyntenyCmoCh19G008950
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572248.1 hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5398.13Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNI KSPRVADESMYSAGGGADGGGRVIDGNRR+GNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_022969305.1 uncharacterized protein LOC111468352 [Cucurbita maxima]4.3e-5297.2Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNI KSPRVADESMYSAGGGADGG  VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_023554647.1 uncharacterized protein LOC111811837 [Cucurbita pepo subsp. pepo]3.7e-5196.26Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNI KSPRVADESMYSAGGGADGG  VIDGNRRE NSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
XP_031744820.1 uncharacterized protein LOC101211016 [Cucumis sativus]1.4e-4790Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGR---VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMV
        MWRLAAAVRRNLHNI KSPRVADESMY  GGG DGGGR   V+DG+RREGNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLMV
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGR---VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMV

Query:  SDSMRYAILM
        SDSMRYAILM
Subjt:  SDSMRYAILM
XP_038888385.1 uncharacterized protein LOC120078235 [Benincasa hispida]1.1e-4788.39Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMY--SAGGGADGGGR---VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHL
        MWRLAAAVRRNLHNI KSPRVADESMY  + GGG DGGGR   V+DG+RREGNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHL
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMY--SAGGGADGGGR---VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHL

Query:  MVSDSMRYAILM
        MVSDSMRYAILM
Subjt:  MVSDSMRYAILM
TrEMBL top hitse value%identityAlignment
A0A1S3C134 uncharacterized protein LOC1034956672.6e-4284.91Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGR----VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
        MWRLAAAVRRNLHNI KSPRVADESMY  GGG DGGGR    V+DG+RREGNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGR----VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM

Query:  VSDSMR
         S+  R
Subjt:  VSDSMR
A0A5D3BTM8 Uncharacterized protein9.1e-4889.19Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGR----VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
        MWRLAAAVRRNLHNI KSPRVADESMY  GGG DGGGR    V+DG+RREGNSYGFSMIY+LLRTPFS+LSCFSQPHVNGVDGMWVSGEFPRISEVNHLM
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGR----VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLM

Query:  VSDSMRYAILM
        VSDSMRYAILM
Subjt:  VSDSMRYAILM
A0A6J1C6U0 uncharacterized protein LOC1110079082.6e-4282.24Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAA +RRNLHNI KSPRVADESMY  GGG DGGG V + +RR GNSYGFSMIY++LRTPFS+L CFSQPHVNG DG+WVSGEF RISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
A0A6J1ER34 uncharacterized protein LOC1114370339.8e-4283.33Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVID-GNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD
        MWRLAAAVR  LHNI KSPRVADESM+S GGG DGGGRV+D G RRE NS+G S+IY +LRTPFS LSCFS PHVNGVDGMWVSGEF RISEVNHLMVSD
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVID-GNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD

Query:  SMRYAILM
        SMRYAILM
Subjt:  SMRYAILM
A0A6J1HZK3 uncharacterized protein LOC1114683522.1e-5297.2Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        MWRLAAAVRRNLHNI KSPRVADESMYSAGGGADGG  VIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein4.7e-2048.15Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADES-MYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD
        M ++ + +RRNL N+ KSPRVADES + S     D GG    GN   G          +++ P S++SCFS P V+  DG+WVSG++ R+SEVNHLMV D
Subjt:  MWRLAAAVRRNLHNITKSPRVADES-MYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSD

Query:  SMRYAILM
         MRYA+LM
Subjt:  SMRYAILM
AT5G35732.1 unknown protein4.1e-2451.4Show/hide
Query:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS
        M ++ + +RRNL N+ KSPRVAD++   +     G G V +G R   NS        ++R PFS++SCF+ P V+G DG+WVSG++  ISEVNHLMVSDS
Subjt:  MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDS

Query:  MRYAILM
        MRYAILM
Subjt:  MRYAILM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAACGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGC
GGAGGTAGGGTAATCGATGGCAACCGGAGAGAGGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCT
CAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATC
TTAATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAACGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGC
GGAGGTAGGGTAATCGATGGCAACCGGAGAGAGGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCT
CAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCCGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATC
TTAATGTAA
Protein sequenceShow/hide protein sequence
MWRLAAAVRRNLHNITKSPRVADESMYSAGGGADGGGRVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAI
LM