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CmoCh19G009030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G009030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationCmo_Chr19:8501250..8503495
RNA-Seq ExpressionCmoCh19G009030
SyntenyCmoCh19G009030
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572259.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.5e-3698.86Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVE+SCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

XP_022952574.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita moschata]2.2e-36100Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

XP_022952575.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita moschata]2.2e-36100Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

XP_022969309.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Cucurbita maxima]2.1e-3496.59Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

XP_022969310.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Cucurbita maxima]2.1e-3496.59Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

TrEMBL top hitse value%identityAlignment
A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 64.9e-2977.55Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEAVLVEYDLSF
        MASFAARAI RSS GKAATLLS G+RAAPARS FRIA+KRPFS  + R+P+EMS CVESMLPFHSATSSALMTSMLSVS HSYGWLSE +L  +   F
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEAVLVEYDLSF

A0A6J1GM36 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.1e-36100Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A6J1GM60 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.1e-36100Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A6J1HZK6 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.0e-3496.59Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.0e-3496.59Show/hide
Query:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAISRSSFG+AATLLSVGSRAAPARSSFRIA+KRPFSQCAVRLPVEMS CVESMLPFHSATSSALMTSMLSVSRHSYGWLSE
Subjt:  MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSE

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial1.3e-1049.43Show/hide
Query:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEA
        AR++ R++  ++A   S G  A+ A+S+   FR  A+R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+A
Subjt:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEA

Arabidopsis top hitse value%identityAlignment
AT1G28395.2 unknown protein1.2e-1145.05Show/hide
Query:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEAV
        AAR++ RS+  +A++     S G +  P  AR++FR+  + P +    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVSR   GW+ + +
Subjt:  AARAISRSSFGKAATL---LSVGSRAAP--ARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEAV

AT2G20585.1 nuclear fusion defective 69.1e-1249.43Show/hide
Query:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEA
        AR++ R++  ++A   S G  A+ A+S+   FR  A+R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+A
Subjt:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEA

AT2G20585.2 nuclear fusion defective 69.1e-1249.43Show/hide
Query:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEA
        AR++ R++  ++A   S G  A+ A+S+   FR  A+R      +R PVE+S CVES+LP+HSAT+SALMTS LS+S  +YGWLS+A
Subjt:  ARAISRSSFGKAATLLSVGSRAAPARSS---FRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEA

AT2G33847.1 unknown protein3.1e-1252.5Show/hide
Query:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHS
        AAR++ RS  G+A  A L S     + ARSSF++  + P S    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHS

AT2G33847.2 unknown protein3.1e-1252.5Show/hide
Query:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHS
        AAR++ RS  G+A  A L S     + ARSSF++  + P S    R PVE+SCCVE+MLP+H+AT+SAL+ SMLSVS  S
Subjt:  AARAISRSSFGKA--ATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTTGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTCCGCATTGC
TGCTAAACGACCTTTCTCTCAGTGTGCTGTAAGGCTTCCAGTTGAAATGAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATTAATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGCTGTGTTGGTCGAATACGACCTCAGCTTCATTGGTTACTTGGATTGCCTTTGTGATTGTTCAATG
ATGATGTGTGATGATGAATTGTCAAAGAGGCAGAAAGTCTTGTTTGCAGAGTTCTACATTGTGACAGTGCCCGCTGCTAAAATACTCGTGCTGATCTGCAGGAATTTGGT
TTTCCATGGCTCGAATCTCTGTCTAGCAAGCATGTCTTAG
mRNA sequenceShow/hide mRNA sequence
CTCGTTTTCTCGAGCAACGGAAGCAGGGTTTAGCATTTGAATGCCCTAAATCTGAGACGGAACTCTGTTTATCGTGGCTGACTGCACATAATTTTTCGCCGCGCTCTCAG
ATTTAACGATGGCTTCCTTTGCCGCCAGGGCCATTTCCCGATCCTCCTTCGGCAAGGCTGCGACTCTTCTGAGCGTCGGATCCAGAGCAGCTCCGGCTCGTTCATCATTC
CGCATTGCTGCTAAACGACCTTTCTCTCAGTGTGCTGTAAGGCTTCCAGTTGAAATGAGCTGCTGTGTGGAGTCCATGCTTCCCTTCCATTCTGCTACTTCTTCGGCATT
AATGACTTCGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGCTGTGTTGGTCGAATACGACCTCAGCTTCATTGGTTACTTGGATTGCCTTTGTGATT
GTTCAATGATGATGTGTGATGATGAATTGTCAAAGAGGCAGAAAGTCTTGTTTGCAGAGTTCTACATTGTGACAGTGCCCGCTGCTAAAATACTCGTGCTGATCTGCAGG
AATTTGGTTTTCCATGGCTCGAATCTCTGTCTAGCAAGCATGTCTTAGATTCTAAATTTGTGCAACTACGGATTACTAGAATGTATAGGAAGAGATACACATTAGACAGG
AAGGCTTCAATAAATTGTCTCGTTATGTTTTAACTCCTTAAAAGGATTGTCTTGCAATTATGAAATAGAAAATCTTACCAAGATGAGAGGAAGGATTCTTCGGCTAGCAG
TCTTTATATATCTTGTATATTACTCTATCATGGATGCTTATCAAACTTCATGACCTCTATTAATAGATGTATCGCACAATGTTAACGCCATTTAATATCTATTTGGCAGT
GACTGGCTTGCAAACTTCATGATAGACGTTGATTGGAAAAGGTTTCACCTTCTTGGGCAACATGGTCACCCAAGTAAATCTTCGATTGCAACCAGGGTTTGTGTTTGGCA
AGCAATCTCATCTTTTAAATTTAGTTTCCTCAGCTTAATCTTGATATTCAACTGAAAGACCCAAATAACAGCCTTTTTCTTATGATATATTTTATTTAGGTTCAGATATG
ATTTTGGTCTTTGTATCTTTCGTTTCATTAGAAACTAATTCCAAGAACTATGTGCAATTTACCCATTATGATGAGTCGAGCAAATCTGCTAGAGCACATTGATATAGTAC
CCATGAATGCAAAGG
Protein sequenceShow/hide protein sequence
MASFAARAISRSSFGKAATLLSVGSRAAPARSSFRIAAKRPFSQCAVRLPVEMSCCVESMLPFHSATSSALMTSMLSVSRHSYGWLSEAVLVEYDLSFIGYLDCLCDCSM
MMCDDELSKRQKVLFAEFYIVTVPAAKILVLICRNLVFHGSNLCLASMS