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CmoCh19G009590 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G009590
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionB box-type domain-containing protein
Genome locationCmo_Chr19:8734617..8735024
RNA-Seq ExpressionCmoCh19G009590
SyntenyCmoCh19G009590
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572307.1 B-box domain protein 30, partial [Cucurbita argyrosperma subsp. sororia]3.1e-7199.26Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI
        MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI

Query:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
        VSSS MERNFQNYHCGSDDYDQNSSQLLQTPCLFL
Subjt:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL

XP_008455408.1 PREDICTED: B-box zinc finger protein 21 [Cucumis melo]4.1e-4774.07Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI
        MCKGV QEET+A V++R TT+   A+  GGDP  CELCGSRASLYC+ADEAYLC KCDK VH+ANFLALRHVRCLLCNTCQ  T+RYLLGASMEVV+PSI
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI

Query:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
        V   S ERNF NYHC SD + QN SQ+L+TPCLFL
Subjt:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL

XP_022953004.1 B-box domain protein 30 [Cucurbita moschata]1.2e-59100Show/hide
Query:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD
        MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD
Subjt:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD

Query:  QNSSQLLQTPCLFL
        QNSSQLLQTPCLFL
Subjt:  QNSSQLLQTPCLFL

XP_022968882.1 B-box domain protein 30 [Cucurbita maxima]4.6e-5192.11Show/hide
Query:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD
        MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQR TRRYLLGASMEVVLPSIVSSSSM+RNFQN    SD YD
Subjt:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD

Query:  QNSSQLLQTPCLFL
        QNSSQLL+T CLFL
Subjt:  QNSSQLLQTPCLFL

XP_023511647.1 B-box domain protein 30-like [Cucurbita pepo subsp. pepo]9.0e-7197.78Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI
        MCKGVGQE+TQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRY+LGASMEVVLPSI
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI

Query:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
        VSSSSMERNFQNYHCGSDDYDQNSSQLL+TPCLFL
Subjt:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL

TrEMBL top hitse value%identityAlignment
A0A0A0K6V9 B box-type domain-containing protein7.5e-4775Show/hide
Query:  MCKGVGQEE-TQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPS
        MCKGV QEE TQ  V++RRTT+   A  GGGDP  CELCGSRASLYC+ADEAYLC KCDK VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVLP 
Subjt:  MCKGVGQEE-TQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPS

Query:  IVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
          S  S ERNF NYHC SD + QN SQ+L+TPCLFL
Subjt:  IVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL

A0A1S3C0U6 B-box zinc finger protein 212.0e-4774.07Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI
        MCKGV QEET+A V++R TT+   A+  GGDP  CELCGSRASLYC+ADEAYLC KCDK VH+ANFLALRHVRCLLCNTCQ  T+RYLLGASMEVV+PSI
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI

Query:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
        V   S ERNF NYHC SD + QN SQ+L+TPCLFL
Subjt:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL

A0A5A7TAC0 B-box zinc finger protein 212.0e-4774.07Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI
        MCKGV QEET+A V++R TT+   A+  GGDP  CELCGSRASLYC+ADEAYLC KCDK VH+ANFLALRHVRCLLCNTCQ  T+RYLLGASMEVV+PSI
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSI

Query:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
        V   S ERNF NYHC SD + QN SQ+L+TPCLFL
Subjt:  VSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL

A0A6J1GNE7 B-box domain protein 305.9e-60100Show/hide
Query:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD
        MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD
Subjt:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD

Query:  QNSSQLLQTPCLFL
        QNSSQLLQTPCLFL
Subjt:  QNSSQLLQTPCLFL

A0A6J1HUR8 B-box domain protein 302.2e-5192.11Show/hide
Query:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD
        MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQR TRRYLLGASMEVVLPSIVSSSSM+RNFQN    SD YD
Subjt:  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYD

Query:  QNSSQLLQTPCLFL
        QNSSQLL+T CLFL
Subjt:  QNSSQLLQTPCLFL

SwissProt top hitse value%identityAlignment
O50055 Zinc finger protein CONSTANS-LIKE 17.8e-0946.67Show/hide
Query:  EPCELCGSRA-SLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGA
        + C+ C S A ++YC+AD AYLC  CD  VH+AN LA RH R  +C +C+RA   +   A
Subjt:  EPCELCGSRA-SLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGA

Q1G3I2 B-box domain protein 302.0e-2043.97Show/hide
Query:  MCKGVGQEETQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVL
        MC+G  +EE + +     +R  TE  +A      P  CELCG  A++YC+AD A+LC+KCD+ VHSANFLA RH+R ++C TC++ TRR L+G +  VVL
Subjt:  MCKGVGQEETQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVL

Query:  PSIVSSSSMERNFQNY
        P I   + +E +  ++
Subjt:  PSIVSSSSMERNFQNY

Q39057 Zinc finger protein CONSTANS7.0e-1046.97Show/hide
Query:  GGGGDPEPCELCGSRA-SLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGA
        G      PC+ C S A ++YC AD AYLC  CD  VHSAN +A RH R  +C +C+RA   +L  A
Subjt:  GGGGDPEPCELCGSRA-SLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGA

Q9LJB7 B-box zinc finger protein 322.4e-1046.43Show/hide
Query:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG
        CELCG+ A L+C AD A+LC+ CD   H++NFL  RH R ++C  C+  T+ ++ G
Subjt:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG

Q9LRM4 B-box domain protein 313.2e-1843.65Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG-A
        MC+G+  EE++            R+ GGG          P  CELC   AS++C+AD A+LC+KCD+ VH ANFLA RHVR +LC +CQ+ TRR L+G  
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG-A

Query:  SMEVVLPSI--VSSSSME-RNFQNYH
           VVLPS+  V  +++E R+ Q+ H
Subjt:  SMEVVLPSI--VSSSSME-RNFQNYH

Arabidopsis top hitse value%identityAlignment
AT3G21150.1 B-box 321.7e-1146.43Show/hide
Query:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG
        CELCG+ A L+C AD A+LC+ CD   H++NFL  RH R ++C  C+  T+ ++ G
Subjt:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG

AT3G21890.1 B-box type zinc finger family protein2.2e-1943.65Show/hide
Query:  MCKGVGQEETQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG-A
        MC+G+  EE++            R+ GGG          P  CELC   AS++C+AD A+LC+KCD+ VH ANFLA RHVR +LC +CQ+ TRR L+G  
Subjt:  MCKGVGQEETQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG-A

Query:  SMEVVLPSI--VSSSSME-RNFQNYH
           VVLPS+  V  +++E R+ Q+ H
Subjt:  SMEVVLPSI--VSSSSME-RNFQNYH

AT4G15248.1 B-box type zinc finger family protein1.4e-2143.97Show/hide
Query:  MCKGVGQEETQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVL
        MC+G  +EE + +     +R  TE  +A      P  CELCG  A++YC+AD A+LC+KCD+ VHSANFLA RH+R ++C TC++ TRR L+G +  VVL
Subjt:  MCKGVGQEETQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVL

Query:  PSIVSSSSMERNFQNY
        P I   + +E +  ++
Subjt:  PSIVSSSSMERNFQNY

AT4G27310.1 B-box type zinc finger family protein7.7e-1254Show/hide
Query:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRAT
        C+LC   A +YC++D+A LC  CD  VH ANFL  +H RCLLC+ CQ  T
Subjt:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRAT

AT5G54470.1 B-box type zinc finger family protein5.9e-1239.13Show/hide
Query:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQ
        CELC   A +YC++D+A LC  CD  VH ANFL  +H+RCLLC+ CQ  T     G ++   +    S  + ++N  +   G    DQN +Q
Subjt:  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGGAGTAGGACAGGAAGAAACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCGAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCT
CTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGT
GCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATCTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATCGATGGAGAGGAATTTC
CAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCTTCCCAACTTCTGCAAACTCCTTGTCTCTTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAAGGAGTAGGACAGGAAGAAACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCGAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCT
CTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGT
GCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATCTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATCGATGGAGAGGAATTTC
CAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCTTCCCAACTTCTGCAAACTCCTTGTCTCTTTCTTTAA
Protein sequenceShow/hide protein sequence
MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSSMERNF
QNYHCGSDDYDQNSSQLLQTPCLFL