; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G009760 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G009760
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationCmo_Chr19:8810668..8810973
RNA-Seq ExpressionCmoCh19G009760
SyntenyCmoCh19G009760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]2.6e-3078.12Show/hide
Query:  LLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH
        L CL++A+ILLIQAM S ATTT   +S APEP+E    EG  +AEAPEIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSVH
Subjt:  LLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]7.1e-2071.43Show/hide
Query:  MPKISLL-CLLLAQILLIQAM-ASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIR
        M KI LL CL++ +I LIQA+  S ATTT   +SVAPE SE    EG  +AEAPEIRRLGKHH DKS+AGGGVIIGGLVTAVFAAVFCYIR
Subjt:  MPKISLL-CLLLAQILLIQAM-ASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIR

KAF7805845.1 Actin cytoskeleton-regulatory complex protein [Senna tora]1.7e-1867.78Show/hide
Query:  LLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHV-DKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR
        ++ LLL QIL+++AMA T T    H  +A +P  +  V G G+AEAPEIRRLGKHH  DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKR
Subjt:  LLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHV-DKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4396.04Show/hide
Query:  MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
        M KISLLCL+LAQILLIQAMASTATTTT HVS APEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
Subjt:  MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV

Query:  H
        H
Subjt:  H

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-4295.05Show/hide
Query:  MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
        M KISLL L+LAQILLIQAMASTATTTT HVS APEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV
Subjt:  MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSV

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A0A0K3N0 Uncharacterized protein9.9e-2874.76Show/hide
Query:  MPKISLL-CLLLAQILLIQAM-ASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD
        M KI LL CL++ +I LIQA+  S ATTT   +SVAPE SE    EG  +AEAPEIRRLGKHH DKS+AGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD
Subjt:  MPKISLL-CLLLAQILLIQAM-ASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD

Query:  SVH
        SVH
Subjt:  SVH

A0A2R6QCD3 Actin cytoskeleton-regulatory complex protein2.7e-1758.1Show/hide
Query:  MPKISLLCLLLAQILLIQAMA--STATTTTRHVSVAPEPSETDNVE-------GPGLAEAPEIRRLGKHH-VDKSVAGGGVIIGGLVTAVFAAVFCYIRV
        M +  L CL+LA ILL+QAMA  S         ++A  P+ T +VE       G  +AEAPEI RLGKHH  DKSVAGGGVIIGGL TA+FAAV+CYIRV
Subjt:  MPKISLLCLLLAQILLIQAMA--STATTTTRHVSVAPEPSETDNVE-------GPGLAEAPEIRRLGKHH-VDKSVAGGGVIIGGLVTAVFAAVFCYIRV

Query:  TRKRD
        TR+RD
Subjt:  TRKRD

A0A5D3C590 Uncharacterized protein1.3e-3078.12Show/hide
Query:  LLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH
        L CL++A+ILLIQAM S ATTT   +S APEP+E    EG  +AEAPEIRRLGKHH DKSVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSVH
Subjt:  LLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH

A0A5N5GJH8 Uncharacterized protein2.1e-1754.37Show/hide
Query:  MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEP-SETDNVEGPGLAEAPEIRRLG-----KHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR
        M ++ L+CL+LA  LL+ A+A+  + T    S+A EP S+++++E   +AEAP +RRLG     +   DKSVAGGG+IIGGLVT +FAAVFCYIRVTRKR
Subjt:  MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEP-SETDNVEGPGLAEAPEIRRLG-----KHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR

Query:  DGV
         GV
Subjt:  DGV

A5BAN6 Uncharacterized protein5.5e-1859.38Show/hide
Query:  MPKISLLCLLLAQILLIQAMA--STATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR
        M ++ L+CLLLA+IL++QA+A  S        V VA +PS     E   +AEAP  RRLGKHHVD+S+AGGGVIIGGL TA+FAAVFCYIR+TR+R
Subjt:  MPKISLLCLLLAQILLIQAMA--STATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein4.6e-0943.96Show/hide
Query:  LLCLLLAQILLIQAMASTA-TTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHH--VDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRK
        +LC LL  +  + A +S A    TR +     P E    E P ++   E  R G HH  V++SVAGGGVI+GGL T     VFCYIR TRK
Subjt:  LLCLLLAQILLIQAMASTA-TTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHH--VDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAAATTTCCCTTCTTTGCCTCCTTCTGGCCCAGATCTTGCTGATTCAAGCAATGGCTTCGACTGCCACAACCACAACTCGCCATGTGTCGGTGGCCCCGGAGCC
ATCGGAGACCGACAACGTAGAAGGGCCTGGACTGGCGGAGGCGCCGGAGATCCGACGCCTGGGAAAGCATCACGTTGATAAGTCCGTGGCCGGCGGGGGAGTCATCATTG
GCGGCCTTGTTACGGCAGTTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAAATTTCCCTTCTTTGCCTCCTTCTGGCCCAGATCTTGCTGATTCAAGCAATGGCTTCGACTGCCACAACCACAACTCGCCATGTGTCGGTGGCCCCGGAGCC
ATCGGAGACCGACAACGTAGAAGGGCCTGGACTGGCGGAGGCGCCGGAGATCCGACGCCTGGGAAAGCATCACGTTGATAAGTCCGTGGCCGGCGGGGGAGTCATCATTG
GCGGCCTTGTTACGGCAGTTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGAAAAAGAGATGGGGTTGATTCGGTTCATTGA
Protein sequenceShow/hide protein sequence
MPKISLLCLLLAQILLIQAMASTATTTTRHVSVAPEPSETDNVEGPGLAEAPEIRRLGKHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVDSVH