; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G009890 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G009890
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein THYLAKOID FORMATION1, chloroplastic
Genome locationCmo_Chr19:8851371..8854162
RNA-Seq ExpressionCmoCh19G009890
SyntenyCmoCh19G009890
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
GO:0010207 - photosystem II assembly (biological process)
GO:0045037 - protein import into chloroplast stroma (biological process)
GO:0045038 - protein import into chloroplast thylakoid membrane (biological process)
InterPro domainsIPR017499 - Protein Thf1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022952156.1 protein THYLAKOID FORMATION1, chloroplastic-like isoform X1 [Cucurbita moschata]4.6e-16099.33Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
        MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT  DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI

Query:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
        VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
Subjt:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK

Query:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

XP_022952157.1 protein THYLAKOID FORMATION1, chloroplastic-like isoform X2 [Cucurbita moschata]1.4e-161100Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

XP_022969187.1 protein THYLAKOID FORMATION1, chloroplastic-like isoform X1 [Cucurbita maxima]4.3e-15898.33Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
        MAAVNSVSFS LSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRT SF+SRMVIHCMASGT  DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI

Query:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
        VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
Subjt:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK

Query:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

XP_022969189.1 protein THYLAKOID FORMATION1, chloroplastic-like isoform X2 [Cucurbita maxima]1.3e-15998.99Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        MAAVNSVSFS LSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRT SF+SRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

XP_023554556.1 protein THYLAKOID FORMATION1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]3.0e-15998.66Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        MAAVNSVSF+ALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRT SF+SRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAG KGN
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

TrEMBL top hitse value%identityAlignment
A0A6J1C3B8 protein THYLAKOID FORMATION1, chloroplastic isoform X16.7e-14991.58Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        MAAVNSVSFSALSQCS+RRL +PSARSLAS+FDGFRFR SVFCHYSGVRT S++SRMV+HCM++GTDVTTVAETKANFLK YKRPIPSIYNTV+QELIVQ
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYK+TYRYDPVFALGFVTVYD+LMEGYPSDEDR+AIFQAYI ALNEDPEQYRIDA+KLEEWARSQTAASLVEFAS+EGEVESILKDIAERAG KG+
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTG
        FSYSRFFAIGLFRLLELANA+EPSILEKLCAALNV+KK VDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTA+EAITKCLGEYSMQTG
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTG

A0A6J1GJH0 protein THYLAKOID FORMATION1, chloroplastic-like isoform X12.2e-16099.33Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
        MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT  DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI

Query:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
        VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
Subjt:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK

Query:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

A0A6J1GJN0 protein THYLAKOID FORMATION1, chloroplastic-like isoform X26.9e-162100Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

A0A6J1HVN0 protein THYLAKOID FORMATION1, chloroplastic-like isoform X12.1e-15898.33Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
        MAAVNSVSFS LSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRT SF+SRMVIHCMASGT  DVTTVAETKANFLKAYKRPIPSIYNTVVQELI
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGT--DVTTVAETKANFLKAYKRPIPSIYNTVVQELI

Query:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
        VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK
Subjt:  VQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSK

Query:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  GNFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

A0A6J1I1V8 protein THYLAKOID FORMATION1, chloroplastic-like isoform X26.5e-16098.99Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        MAAVNSVSFS LSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRT SF+SRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
        FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL

SwissProt top hitse value%identityAlignment
B0C3M8 Protein Thf11.9e-3637.12Show/hide
Query:  DVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWA
        ++ TV++TK  F   + RP+ S+Y  VV+EL+V+ HL+R  + +RYDP+FALG  T +DR M+GY  + D+DAIF A   A   DP Q + D Q+L E A
Subjt:  DVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWA

Query:  RSQTAASLVEF---ASREG--EVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANAS----EPSILE---KLCAALNVDKKGVDRDLDVYRNLLSKL
        +S++A  ++++   A+  G  E++  L++IA+       F YSR FAIGLF LLEL+  +    E S+ E    +C  LN+ +  + +DL++YR  L K+
Subjt:  RSQTAASLVEF---ASREG--EVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANAS----EPSILE---KLCAALNVDKKGVDRDLDVYRNLLSKL

Query:  VQAKELLKEYVDREKKKRDERAGSQTASE
         Q ++ + + ++ +KK+R+     +  S+
Subjt:  VQAKELLKEYVDREKKKRDERAGSQTASE

Q116P5 Protein Thf11.2e-3336.11Show/hide
Query:  TVAETKANFLKAYKRPIPSIYNTVVQELIVQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQ
        TV++TK  F   + RPI SIYN V++EL+V+ HL+     Y Y+P +ALG VT +DR M+GY   ED+ +IF A I    EDP +YR DA+ LE+ A   
Subjt:  TVAETKANFLKAYKRPIPSIYNTVVQELIVQQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQ

Query:  TAASLVEFASREGEVES--ILKDIAERAGSKGNFSYSRFFAIGLFRLLELANA-------SEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKEL
        +A+ ++ +      +++   L+D          F YSR FAIGLF LLE+ +             L+K+C +LN+ ++ + +D+D+Y + L ++ QA+  
Subjt:  TAASLVEFASREGEVES--ILKDIAERAGSKGNFSYSRFFAIGLFRLLELANA-------SEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKEL

Query:  LKEYVDREKKKRDERA
        +++ +   +KKR++R+
Subjt:  LKEYVDREKKKRDERA

Q7XAB8 Protein THYLAKOID FORMATION1, chloroplastic7.2e-10868.94Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHC-MASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIV
        MAAV SVSFSA++Q ++R+  + S+RS+    D FRFR +       VR+ +  SR V+HC  +S  D+ TVA+TK  FL AYKRPIP++YNTV+QELIV
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHC-MASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIV

Query:  QQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKG
        QQHL RYKK+Y+YDPVFALGFVTVYD+LMEGYPS+EDR+AIF+AYI AL EDPEQYR DAQKLEEWAR+Q A +LV+F+S+EGE+E+I KDIA+RAG+K 
Subjt:  QQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKG

Query:  NFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEY
         F YSR FA+GLFRLLELAN ++P+ILEKLCAALNV+KK VDRDLDVYRNLLSKLVQAKELLKEYV+REKKKR ER  +Q A+E +TKCLG+Y
Subjt:  NFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEY

Q84PB7 Protein THYLAKOID FORMATION1, chloroplastic1.2e-9967.36Show/hide
Query:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDV-TTVAETKANFLKAYKRPIPSIYNTVVQELIV
        MAA++S+ F+AL + +D R   PS  + A+         SV         P   SR V+ C+A+  DV  TVAETK NFLK+YKRPI SIY+TV+QEL+V
Subjt:  MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDV-TTVAETKANFLKAYKRPIPSIYNTVVQELIV

Query:  QQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKG
        QQHLMRYK TY+YD VFALGFVTVYD+LMEGYPS+EDRDAIF+AYI ALNEDPEQYR DAQK+EEWARSQ   SLVEF+S++GE+E+ILKDI+ERA  KG
Subjt:  QQHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKG

Query:  NFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITK
        +FSYSRFFA+GLFRLLELANA+EP+IL+KLCAALN++K+ VDRDLDVYRN+LSKLVQAKELLKEYV+REKKKR+ER+ +  ++EA+TK
Subjt:  NFSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITK

Q9SKT0 Protein THYLAKOID FORMATION 1, chloroplastic5.2e-10670.1Show/hide
Query:  AVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPS-FNSRMVIHCMASGT-DVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        A++S+SF AL Q SD+     S+R LAS          +   +S +   S   S+ +IHCM++ T DV  V+ETK+ FLKAYKRPIPSIYNTV+QELIVQ
Subjt:  AVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPS-FNSRMVIHCMASGT-DVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYD+LMEGYPSD+DRDAIF+AYI ALNEDP+QYRIDAQK+EEWARSQT+ASLV+F+S+EG++E++LKDIA RAGSK  
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGE
        FSYSRFFA+GLFRLLELA+A++P++L+KLCA+LN++KK VDRDLDVYRNLLSKLVQAKELLKEYV+REKKK+ ERA SQ A+E I+KCLG+
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGE

Arabidopsis top hitse value%identityAlignment
AT2G20890.1 photosystem II reaction center PSB29 protein3.7e-10770.1Show/hide
Query:  AVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPS-FNSRMVIHCMASGT-DVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ
        A++S+SF AL Q SD+     S+R LAS          +   +S +   S   S+ +IHCM++ T DV  V+ETK+ FLKAYKRPIPSIYNTV+QELIVQ
Subjt:  AVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPS-FNSRMVIHCMASGT-DVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQ

Query:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN
        QHLMRYKKTYRYDPVFALGFVTVYD+LMEGYPSD+DRDAIF+AYI ALNEDP+QYRIDAQK+EEWARSQT+ASLV+F+S+EG++E++LKDIA RAGSK  
Subjt:  QHLMRYKKTYRYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGN

Query:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGE
        FSYSRFFA+GLFRLLELA+A++P++L+KLCA+LN++KK VDRDLDVYRNLLSKLVQAKELLKEYV+REKKK+ ERA SQ A+E I+KCLG+
Subjt:  FSYSRFFAIGLFRLLELANASEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTGTAAATTCCGTATCATTCTCGGCATTAAGTCAATGTTCTGATAGACGATTGCCGATTCCCTCGGCTCGTTCACTCGCCTCGCATTTCGACGGGTTTCGTTT
TCGTAAGAGCGTTTTCTGTCATTATTCCGGAGTTCGGACACCCAGCTTCAATTCTCGCATGGTTATTCATTGCATGGCATCCGGAACAGATGTAACAACTGTAGCCGAGA
CTAAAGCGAACTTCCTCAAGGCGTATAAACGGCCTATCCCTAGCATTTACAACACCGTTGTGCAAGAATTGATTGTCCAGCAGCATTTGATGAGGTATAAGAAGACTTAC
CGTTATGACCCTGTTTTCGCCCTTGGTTTTGTTACTGTGTATGATCGACTTATGGAAGGGTACCCTAGCGATGAGGATCGTGATGCCATCTTCCAAGCATACATTAACGC
ATTGAATGAGGATCCAGAGCAATATAGAATTGATGCCCAAAAATTGGAAGAGTGGGCTCGGTCTCAGACTGCAGCTTCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAG
TTGAGAGTATTTTGAAGGACATTGCAGAACGAGCTGGGAGCAAGGGGAATTTCAGCTACAGCCGATTTTTTGCTATTGGGCTATTTCGACTCCTTGAATTGGCAAATGCT
TCTGAACCCAGTATCTTGGAAAAGCTATGTGCCGCTTTAAATGTTGACAAAAAAGGCGTGGACCGAGACCTTGATGTATACCGTAACCTGCTTTCGAAGTTAGTTCAGGC
GAAAGAGCTCCTAAAGGAATATGTCGATAGAGAGAAGAAGAAAAGAGATGAGAGGGCAGGATCACAGACGGCTAGTGAGGCCATAACGAAATGCTTGGGAGAATACAGCA
TGCAGACTGGGTTATGA
mRNA sequenceShow/hide mRNA sequence
CTCTCTGTTCCTTCTTTTTCCCGAGAAAATTTCTTGGAATTTTGTGTATTCTATACGACTTTTCTCCCACTCTTCTTCTTCGATATGAAATCCATTTCCTCCGGGAGTTC
GTAATCTTCGCAAGTTTTTTCTCATTCTTCTTCAATGGCGGCTGTAAATTCCGTATCATTCTCGGCATTAAGTCAATGTTCTGATAGACGATTGCCGATTCCCTCGGCTC
GTTCACTCGCCTCGCATTTCGACGGGTTTCGTTTTCGTAAGAGCGTTTTCTGTCATTATTCCGGAGTTCGGACACCCAGCTTCAATTCTCGCATGGTTATTCATTGCATG
GCATCCGGAACAGATGTAACAACTGTAGCCGAGACTAAAGCGAACTTCCTCAAGGCGTATAAACGGCCTATCCCTAGCATTTACAACACCGTTGTGCAAGAATTGATTGT
CCAGCAGCATTTGATGAGGTATAAGAAGACTTACCGTTATGACCCTGTTTTCGCCCTTGGTTTTGTTACTGTGTATGATCGACTTATGGAAGGGTACCCTAGCGATGAGG
ATCGTGATGCCATCTTCCAAGCATACATTAACGCATTGAATGAGGATCCAGAGCAATATAGAATTGATGCCCAAAAATTGGAAGAGTGGGCTCGGTCTCAGACTGCAGCT
TCATTGGTTGAGTTTGCATCAAGAGAAGGAGAAGTTGAGAGTATTTTGAAGGACATTGCAGAACGAGCTGGGAGCAAGGGGAATTTCAGCTACAGCCGATTTTTTGCTAT
TGGGCTATTTCGACTCCTTGAATTGGCAAATGCTTCTGAACCCAGTATCTTGGAAAAGCTATGTGCCGCTTTAAATGTTGACAAAAAAGGCGTGGACCGAGACCTTGATG
TATACCGTAACCTGCTTTCGAAGTTAGTTCAGGCGAAAGAGCTCCTAAAGGAATATGTCGATAGAGAGAAGAAGAAAAGAGATGAGAGGGCAGGATCACAGACGGCTAGT
GAGGCCATAACGAAATGCTTGGGAGAATACAGCATGCAGACTGGGTTATGAGAGCTGATTGGAGCACTGCCTAATTTGAGATAGACTTGAGAGTTATAGCAATATTCTGA
AGTACCTGATAGAACTGCGTCTGTAATGTATTGTTGGGTATTCACTCAATTGGTGAATTTTGTATTCAGTCAGGCACTACCTTTATTCTCCTTTGATATAACCACCTCAA
GCTATTTTTTAATCATCTGTATTACATATTTTGATTGCAATTGTCAATACAAATGCTTCTGCACAGATATTTGACCA
Protein sequenceShow/hide protein sequence
MAAVNSVSFSALSQCSDRRLPIPSARSLASHFDGFRFRKSVFCHYSGVRTPSFNSRMVIHCMASGTDVTTVAETKANFLKAYKRPIPSIYNTVVQELIVQQHLMRYKKTY
RYDPVFALGFVTVYDRLMEGYPSDEDRDAIFQAYINALNEDPEQYRIDAQKLEEWARSQTAASLVEFASREGEVESILKDIAERAGSKGNFSYSRFFAIGLFRLLELANA
SEPSILEKLCAALNVDKKGVDRDLDVYRNLLSKLVQAKELLKEYVDREKKKRDERAGSQTASEAITKCLGEYSMQTGL