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CmoCh19G010680 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G010680
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr19:9236496..9238604
RNA-Seq ExpressionCmoCh19G010680
SyntenyCmoCh19G010680
Gene Ontology termsGO:0045168 - cell-cell signaling involved in cell fate commitment (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039617 - CLAVATA3/ESR (CLE)-related protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061638.1 hypothetical protein E6C27_scaffold212G00060 [Cucumis melo var. makuwa]1.2e-1868.82Show/hide
Query:  RFNPKFAPLMAVIFMVMLVTAAAGRH--ALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP
        R N   APLMAV+FMVMLVTAAA RH  ALP   EEA       SSS +MIMR+ GY+K +MEHLRRL SSSTARYIPGGPDSQHHS+ PR P
Subjt:  RFNPKFAPLMAVIFMVMLVTAAAGRH--ALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP
KAE8647339.1 hypothetical protein Csa_003556, partial [Cucumis sativus]6.1e-1564.04Show/hide
Query:  RFNPKFA-PLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSP
        RFN   A PLMAV+FM MLVTAA   HA  L      A E   SSSS+M+MR+ GY+K +MEHLRRL SSST RYIPGGPDSQHHS+ P
Subjt:  RFNPKFA-PLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSP
KAG6572409.1 hypothetical protein SDJN03_29137, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4094Show/hide
Query:  MAATHHRFNPKFAPLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGG----SSSSSMIMRRLGYTKSEMEHLRRLSSSTARYIPGGPDSQHHSRSPRSP
        MAATHHRFNPKFAPL AVIFMVMLVTAAAGRHALPLRTEEAAAIEGGG    SSSSSMIMRRLGYTKS+MEHLRRLSSSTARYIPGGPDSQHHSRSPRSP
Subjt:  MAATHHRFNPKFAPLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGG----SSSSSMIMRRLGYTKSEMEHLRRLSSSTARYIPGGPDSQHHSRSPRSP
KAG6589262.1 hypothetical protein SDJN03_17827, partial [Cucurbita argyrosperma subsp. sororia]4.5e-1862.22Show/hide
Query:  RFNPKFAPLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRLSSSTARYIPGGPDSQHHSRSPRSP
        RF+ K AP MAV+F+ ML+   AGRHA P  T E    E   SSSS MIMR+ GY+K++MEHL+RLSSST RY PGGPDSQHHS  PR P
Subjt:  RFNPKFAPLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRLSSSTARYIPGGPDSQHHSRSPRSP
TrEMBL top hitse value%identityAlignment
A0A0A0KGI4 Uncharacterized protein3.5e-1664.13Show/hide
Query:  RFNPKFA-PLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP
        RFN   A PLMAV+FM MLVTAA   HA  L      A E   SSSS+M+MR+ GY+K +MEHLRRL SSST RYIPGGPDSQHHS+ PR P
Subjt:  RFNPKFA-PLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP
A0A5D3C664 Uncharacterized protein5.8e-1968.82Show/hide
Query:  RFNPKFAPLMAVIFMVMLVTAAAGRH--ALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP
        R N   APLMAV+FMVMLVTAAA RH  ALP   EEA       SSS +MIMR+ GY+K +MEHLRRL SSSTARYIPGGPDSQHHS+ PR P
Subjt:  RFNPKFAPLMAVIFMVMLVTAAAGRH--ALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRL-SSSTARYIPGGPDSQHHSRSPRSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCACCCATCACCGTTTCAACCCAAAATTTGCTCCATTAATGGCCGTTATTTTCATGGTGATGCTTGTCACCGCGGCGGCCGGCCGCCATGCATTGCCGCTGAG
GACGGAGGAGGCGGCGGCCATTGAAGGCGGTGGCAGCAGCAGCAGCAGCATGATAATGCGTAGGTTGGGTTATACCAAAAGCGAAATGGAGCATTTAAGAAGGCTTTCTT
CTTCCACTGCAAGATACATACCTGGAGGGCCTGATTCTCAACATCATTCTCGATCACCTCGTTCGCCAGAGAGAAAGTGTTCTCGTAGAGAGACTGCAAGATCCGGTCGC
AAAAAGAAGCACTCAACAACACCAACAGGAAAATTACCAGTTCCAAACCCTACTGTTTCTTCGTTTTCTGTAAGATTCTCAGCTTTACTTCTTCTTCTTTGCTCTCTTTC
TGCATGTTTCATGCGGATTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCCACCCATCACCGTTTCAACCCAAAATTTGCTCCATTAATGGCCGTTATTTTCATGGTGATGCTTGTCACCGCGGCGGCCGGCCGCCATGCATTGCCGCTGAG
GACGGAGGAGGCGGCGGCCATTGAAGGCGGTGGCAGCAGCAGCAGCAGCATGATAATGCGTAGGTTGGGTTATACCAAAAGCGAAATGGAGCATTTAAGAAGGCTTTCTT
CTTCCACTGCAAGATACATACCTGGAGGGCCTGATTCTCAACATCATTCTCGATCACCTCGTTCGCCAGAGAGAAAGTGTTCTCGTAGAGAGACTGCAAGATCCGGTCGC
AAAAAGAAGCACTCAACAACACCAACAGGAAAATTACCAGTTCCAAACCCTACTGTTTCTTCGTTTTCTGTAAGATTCTCAGCTTTACTTCTTCTTCTTTGCTCTCTTTC
TGCATGTTTCATGCGGATTTTCTAG
Protein sequenceShow/hide protein sequence
MAATHHRFNPKFAPLMAVIFMVMLVTAAAGRHALPLRTEEAAAIEGGGSSSSSMIMRRLGYTKSEMEHLRRLSSSTARYIPGGPDSQHHSRSPRSPERKCSRRETARSGR
KKKHSTTPTGKLPVPNPTVSSFSVRFSALLLLLCSLSACFMRIF