; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh19G011140 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh19G011140
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCYSTM domain-containing protein
Genome locationCmo_Chr19:9480194..9480668
RNA-Seq ExpressionCmoCh19G011140
SyntenyCmoCh19G011140
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012055.1 hypothetical protein SDJN02_26963 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-2489.23Show/hide
Query:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        MGSKLEAG YVAAPPPVGYPVRDGPE+PRQTSTPQTQSRGDGFWKG     CAALCCCWVLDCVF
Subjt:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

XP_022969369.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita maxima]1.4e-2489.23Show/hide
Query:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        MGSKLEAGPYVAAPPPVGYPVRDGPE P QTSTPQTQSRGDGFWKG     CAALCCCWVLDCVF
Subjt:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

XP_022989102.1 cysteine-rich and transmembrane domain-containing protein B-like isoform X2 [Cucurbita maxima]4.2e-1879.66Show/hide
Query:  AGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        +GPYVAAPPPVGYPVRDGP+ P QT TPQTQS+GDGFWKG      AALCCCWVLDCVF
Subjt:  AGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

XP_023511660.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucurbita pepo subsp. pepo]4.7e-2589.23Show/hide
Query:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        MGSKLEAGPYVAAPPPVGYPVRDGPE+P QTSTPQTQSRGDGFWKG     CAALCCCWVLDCVF
Subjt:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

XP_038888289.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida]6.6e-1983.33Show/hide
Query:  AGPYVAAPPPVGYPVRDGPEEPRQTS-TPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        AGPYVAAPPPVGYPVRDGP+ P QT+ TPQTQSRGDGFWKG     CAALCCCWVLDCVF
Subjt:  AGPYVAAPPPVGYPVRDGPEEPRQTS-TPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

TrEMBL top hitse value%identityAlignment
A0A0A0K5N8 CYSTM domain-containing protein3.0e-1775.41Show/hide
Query:  EAGPYVAAPPPVGYPVRDGPEEPRQTS-TPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        ++GPYVAAPPPVGYPVRDGP+ P QT+   QTQSRGDGFWKG     CAALCCCWVLDC+F
Subjt:  EAGPYVAAPPPVGYPVRDGPEEPRQTS-TPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

A0A5A7USJ3 Cysteine-rich and transmembrane domain-containing protein A-like3.0e-1775.41Show/hide
Query:  EAGPYVAAPPPVGYPVRDGPEEPRQTS-TPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        ++GPYVAAPPPVGYPVRDGP+ P QT+   QTQSRGDGFWKG     CAALCCCWVLDC+F
Subjt:  EAGPYVAAPPPVGYPVRDGPEEPRQTS-TPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

A0A6J1I2D9 cysteine-rich and transmembrane domain-containing protein WIH1-like6.6e-2589.23Show/hide
Query:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        MGSKLEAGPYVAAPPPVGYPVRDGPE P QTSTPQTQSRGDGFWKG     CAALCCCWVLDCVF
Subjt:  MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

A0A6J1JEV3 cysteine-rich and transmembrane domain-containing protein B-like isoform X22.1e-1879.66Show/hide
Query:  AGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        +GPYVAAPPPVGYPVRDGP+ P QT TPQTQS+GDGFWKG      AALCCCWVLDCVF
Subjt:  AGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

A0A6J1JJ37 cysteine-rich and transmembrane domain-containing protein B-like isoform X12.1e-1879.66Show/hide
Query:  AGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        +GPYVAAPPPVGYPVRDGP+ P QT TPQTQS+GDGFWKG      AALCCCWVLDCVF
Subjt:  AGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein2.2e-0442.31Show/hide
Query:  PPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        PPP+GYP              +T+S+GDGF+KG      AA+CCC  LD  F
Subjt:  PPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

AT1G56060.1 unknown protein4.0e-0648.28Show/hide
Query:  YVAAPPPVGYPV--RDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        YV APPP+GYPV  +D P+  +     Q++  G GF +G      AA+CCC VLDCVF
Subjt:  YVAAPPPVGYPV--RDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

AT2G32190.1 unknown protein1.5e-0546.77Show/hide
Query:  LEAGPYVAAPPPVGYPVRDGPEEPRQTSTP-QTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        +  GPY+  PPP+GYP  D       T  P +T+S+GDGF KG      AA+CCC VLD  F
Subjt:  LEAGPYVAAPPPVGYPVRDGPEEPRQTSTP-QTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

AT2G32210.1 unknown protein2.8e-0749.18Show/hide
Query:  LEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        +  GPYV APPP+GYP  D        +T +T+S+GDGF KG      AA+CCC VLD  F
Subjt:  LEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF

AT3G22240.1 unknown protein1.2e-1049.21Show/hide
Query:  SKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF
        S+  +GPY  +PPP+GYP RD        +  +T+S+GDGFWKG     CAA+CCC VLD  F
Subjt:  SKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTAAGTTAGAGGCGGGGCCTTATGTTGCAGCTCCACCACCGGTTGGGTATCCGGTGAGAGACGGCCCAGAGGAGCCTCGCCAAACTTCTACGCCACAAACGCA
GTCTAGGGGAGATGGGTTCTGGAAAGGATGGTCAGTCTCTAACTGTGCTGCGTTGTGTTGCTGCTGGGTGTTGGACTGTGTGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTAAGTTAGAGGCGGGGCCTTATGTTGCAGCTCCACCACCGGTTGGGTATCCGGTGAGAGACGGCCCAGAGGAGCCTCGCCAAACTTCTACGCCACAAACGCA
GTCTAGGGGAGATGGGTTCTGGAAAGGATGGTCAGTCTCTAACTGTGCTGCGTTGTGTTGCTGCTGGGTGTTGGACTGTGTGTTCTAAGAGTGATGAGACCCATTTATTT
ATTTTTTGTTATTCTTTTATTACATACGCCTTCTTATCATTGTGTATTATTCTCTTTTCTTTGTATTAATAAATAAATTTTGTTATCTAATTCTATGCTTCCATTCAATT
CCTCGCATTTTTATATGTTTGCAAGTCTTCCGTTCAAATTGTCTATTATATCGTAAAAAAA
Protein sequenceShow/hide protein sequence
MGSKLEAGPYVAAPPPVGYPVRDGPEEPRQTSTPQTQSRGDGFWKGWSVSNCAALCCCWVLDCVF