; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G000030 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G000030
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:94471..97972
RNA-Seq ExpressionCmoCh20G000030
SyntenyCmoCh20G000030
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022944299.1 uncharacterized protein LOC111448786 isoform X1 [Cucurbita moschata]2.4e-74100Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

XP_022944300.1 uncharacterized protein LOC111448786 isoform X2 [Cucurbita moschata]2.4e-74100Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

XP_022944301.1 uncharacterized protein LOC111448786 isoform X3 [Cucurbita moschata]2.4e-74100Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

XP_023512555.1 uncharacterized protein LOC111777262 isoform X2 [Cucurbita pepo subsp. pepo]6.1e-7095.74Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQ IGFAVRLSSSLLWIQIYR GISYMETPVPREADYDLRNSFLSPAT VVVRQPSGSDD IGGSIYDPT CSS+FEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

XP_023512556.1 uncharacterized protein LOC111777262 isoform X3 [Cucurbita pepo subsp. pepo]6.1e-7095.74Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQ IGFAVRLSSSLLWIQIYR GISYMETPVPREADYDLRNSFLSPAT VVVRQPSGSDD IGGSIYDPT CSS+FEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

TrEMBL top hitse value%identityAlignment
A0A0A0KWY7 Uncharacterized protein7.3e-5390.76Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPT  SS+FEDG DSKCLSGISHFGNGDN STS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADND
        GPDVSRSKLSRHFQVAD++
Subjt:  GPDVSRSKLSRHFQVADND

A0A1S3BP27 uncharacterized protein LOC103491645 isoform X23.3e-5391.6Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQ IGF+VRLSSSLLWIQIYR GISYMET VPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPT  SS+FEDG DSKCLSGISHFGNGDN STS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADND
        GPDVSRSKLSRHFQVAD D
Subjt:  GPDVSRSKLSRHFQVADND

A0A6J1FVD5 uncharacterized protein LOC111448786 isoform X31.2e-74100Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

A0A6J1FWG5 uncharacterized protein LOC111448786 isoform X11.2e-74100Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

A0A6J1FYK8 uncharacterized protein LOC111448786 isoform X21.2e-74100Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
        MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTS

Query:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
        GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY
Subjt:  GPDVSRSKLSRHFQVADNDGTNLAGDKALIFTHDLTSCRQY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55535.1 unknown protein2.4e-2449.55Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGH---DSKCLSGISHFGNGDNS
        M+ IGF VRLSSSLLW QIYR G + ++T +PRE D DLRNSFL+P TP + RQ SG+++++GGSIYDP   +S+FE+     +S   + ++H+  G+N 
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGH---DSKCLSGISHFGNGDNS

Query:  STSGPDVSRSK
        S S  + S  K
Subjt:  STSGPDVSRSK

AT1G55535.2 unknown protein2.4e-2449.55Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGH---DSKCLSGISHFGNGDNS
        M+ IGF VRLSSSLLW QIYR G + ++T +PRE D DLRNSFL+P TP + RQ SG+++++GGSIYDP   +S+FE+     +S   + ++H+  G+N 
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGH---DSKCLSGISHFGNGDNS

Query:  STSGPDVSRSK
        S S  + S  K
Subjt:  STSGPDVSRSK

AT3G13420.1 unknown protein1.1e-1341.24Show/hide
Query:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSP------------------ATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDG
        M+  GF VRLSSSLLW QIYR G S +++P PR++D DLRNSFL P                    P + +Q S SD+++  SI +P S + + + G
Subjt:  MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSP------------------ATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAATATTGGTTTTGCTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAGTTCCCCGAGAGGCAGATTA
TGATTTGAGAAATAGTTTTCTTAGCCCCGCTACTCCTGTTGTAGTTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGT
CCGTATTCGAAGATGGTCATGATAGTAAATGTTTGTCTGGGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCC
AGACATTTCCAAGTAGCTGATAATGATGGAACAAACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGCCAGTACTAA
mRNA sequenceShow/hide mRNA sequence
GCTGGACATACCGTTACCCATCTCTTCAACAAAGCCACTACGGCAGAAAGGGCATTTAATTTCCACGTCAACGATGGGATTCACCATTTGAGAACACATGTGACACCAAT
ATCTTGTTGCAATTGACTCGTCCATCCTCGGATGATAACTTCCGATAGAAACCACAACCTTCAGCTATTCAATTTTCGAAAGAGAACAGGATGATCCCAAATCGAATGTA
GCTAGCTCATCGCGGGAAAAGAAGAAAACAAAAAATCGTCAGATCAGATGTGATGTGGAATACACAAAAACTTGAAAACAATATCATGAAGGATGGGAGGAAAACTGTTA
ATTAGTATGGCAAGCAATATCATGAAGGATCGGAGGAAAACGAGGAAGAAGATGAAGAAGAAAAAGGAGTTACTTGAAAGCCGAAGCGTAGGTTGAGGAACTCAAGGAAT
CTGTGCGTTTGCTCCGATCGCAACCGGCGAATTGAAATGGAATGAATAGAATTGGGTGGAAGTGGAAAAGGGGAAGGGGAGGGAGGCCGTCGCGAACTGGAGAGAGAGAG
ACGAGAGACGAGAGAGACAGAATTCAACGAAACAAAAAAGTAAATAGAAAGGATTCTCTCTCCCTCTCTTTCTCTGGCACCCCGACCCTTCCTATCCGCTTCTTCAAACT
CTCCCTTTCCCTCTCTCCCCCTTTATTGCATTTATTTTACTATTTTTTTTTTTTTTATATTTATTTTCTCAATTTCTCTCCCTGAAATTTTCCGACCATCCAATCTTTAT
TTGCCACATTCTCACATTACCCTCGTGTTTTATCTTTATGAGTAACATTTATTGTTATTTTTCGGTAATAATTTAAGCTTCCCATTTCAAAGAAATCCATATGATGCTTT
GCAATTCATTGAGAGATCCACTTCGGCCATGGCTTCGTGATTATGTTAGGCTTCAGTCTTTCGCACTCATTCTCATTTATATCCAGGTGCATTCTTTCCCCCATCGGAAC
TATCATTCTTTGTTATCTCTATTTTCAGTTCTTAATCTTAATCTATTTTTTTGTAAATACATATGAGAAAGATCGGGTGCGCATTGATTGGATCCCTAGGGGCATTGCTT
ATAAATTTGGTGATCGCATTGTTCGCTTTGGAACGTTTCATCCAAGCAATATGGACCCCTTTTTACCTTTTCAGTGAAGCTTACTCTGGCTATGCAAAATATTGGTTTTG
CTGTTAGACTATCGTCTTCACTACTGTGGATTCAAATTTACAGATCGGGGATTTCATATATGGAAACTCCAGTTCCCCGAGAGGCAGATTATGATTTGAGAAATAGTTTT
CTTAGCCCCGCTACTCCTGTTGTAGTTAGACAACCCTCAGGTTCTGATGATATGATAGGGGGCTCTATCTATGATCCAACTTCTTGCTCGTCCGTATTCGAAGATGGTCA
TGATAGTAAATGTTTGTCTGGGATCTCCCATTTCGGTAATGGTGATAATAGTTCTACTTCTGGGCCAGATGTATCTCGATCAAAGCTGTCCAGACATTTCCAAGTAGCTG
ATAATGATGGAACAAACTTGGCTGGTGATAAGGCTTTGATCTTTACGCATGATCTCACATCCTGTCGCCAGTACTAA
Protein sequenceShow/hide protein sequence
MQNIGFAVRLSSSLLWIQIYRSGISYMETPVPREADYDLRNSFLSPATPVVVRQPSGSDDMIGGSIYDPTSCSSVFEDGHDSKCLSGISHFGNGDNSSTSGPDVSRSKLS
RHFQVADNDGTNLAGDKALIFTHDLTSCRQY