; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G000100 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G000100
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionimportin-5
Genome locationCmo_Chr20:113619..114326
RNA-Seq ExpressionCmoCh20G000100
SyntenyCmoCh20G000100
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0008139 - nuclear localization sequence binding (molecular function)
GO:0031267 - small GTPase binding (molecular function)
GO:0061608 - nuclear import signal receptor activity (molecular function)
InterPro domainsIPR011989 - Armadillo-like helical
IPR016024 - Armadillo-type fold
IPR040122 - Importin beta family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040107.1 importin-5 [Cucumis melo var. makuwa]4.7e-10789.27Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        M+AVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS + STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

KAE8649420.1 hypothetical protein Csa_021659 [Cucumis sativus]4.7e-10789.27Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        M+AVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS + STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

KAG6570316.1 Importin-5, partial [Cucurbita argyrosperma subsp. sororia]8.2e-12097.02Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        MSAVLL KQLTRD SYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQES+FLIFAQLSHSTG
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISF+QCLSNSADRDRFQDLLRPMTRTLMESLDN QEATAQ VLELLIELAGTEARFLRRQLVD V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF
        GLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARERQF

XP_038900350.1 importin-5 isoform X1 [Benincasa hispida]2.1e-10789.7Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        MSAVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSD+ KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS S STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

XP_038900351.1 importin-5 isoform X2 [Benincasa hispida]2.1e-10789.7Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        MSAVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSD+ KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS S STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

TrEMBL top hitse value%identityAlignment
A0A0A0L0C1 Uncharacterized protein2.3e-10789.27Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        M+AVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS + STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

A0A1S3BNQ2 importin-52.3e-10789.27Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        M+AVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS + STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

A0A5A7TEZ0 Importin-52.3e-10789.27Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        M+AVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ EDSKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS + STDVKIA+ NAVISFIQCLSNSADRDRFQDLL PM RTLME+L+NGQEATAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

A0A6J1DJS8 importin-5-like isoform X21.1e-10688.84Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        MSAVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ E+SKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS S STDVKIA+ NAVISFIQCLSNS DRDRFQDLL PM RTLME+L+NGQE TAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

A0A6J1DLM2 importin-5-like isoform X11.1e-10688.84Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        MSAVLL KQLTRD SYLWPRLNPSSQ SLKSILLSCIQ E+SKSISKKLCDTVSELASGILPDNGWPE LPFMFQCVSSDS KLQES+FLIFAQLSH  G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        DTLVPHIKHLHGVFLQCLTS S STDVKIA+ NAVISFIQCLSNS DRDRFQDLL PM RTLME+L+NGQE TAQE LELLIELAGTE RFLRRQLVD+V
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEAESLDEGTRHLAIEFV  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER

SwissProt top hitse value%identityAlignment
O00410 Importin-51.1e-1830.47Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG---WPEWLPFMFQCVSSDSLKLQESSFLIFAQLSH
        M+AVLL + L+  +  ++P L    Q ++KS LL  IQ E   S+ KK+CD  +ELA  ++ ++G   WPE L F+F  VSS ++ L+E++  IF     
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG---WPEWLPFMFQCVSSDSLKLQESSFLIFAQLSH

Query:  STGDTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLS-NSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQL
          G+    ++  +  + +QC+        ++  S  A  +FI     N A    F DLL    + + +S     ++    VL+ L+E+A T  ++LR  L
Subjt:  STGDTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLS-NSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQL

Query:  VDIVGLMLQIAEAESLDEGTRHLAIEFVFALAE
           + L L++    SL+   R LA+E +  L+E
Subjt:  VDIVGLMLQIAEAESLDEGTRHLAIEFVFALAE

O74476 Importin subunit beta-38.8e-0826.42Show/hide
Query:  LNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG-WPEWLPFMFQCVSSDSLKLQESSFLIFAQLSH--STGDTLVPHIKHLHGVFLQC
        ++  S+ SL+S LL+C   E   ++  KLCDT++E+A  I    G WPE +  +F  V+S     +ES F     L    S  D+ V  +      F   
Subjt:  LNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG-WPEWLPFMFQCVSSDSLKLQESSFLIFAQLSH--STGDTLVPHIKHLHGVFLQC

Query:  LTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESLDEGTR
        L  A PS  V+I++  A  S +   S  + RD+   LL  +   L     +       + L  + E+A    +  +     ++   L I + + LD   R
Subjt:  LTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESLDEGTR

Query:  HLAIEFVFALAE
          A+E +   +E
Subjt:  HLAIEFVFALAE

P40069 Importin subunit beta-41.1e-0721.36Show/hide
Query:  WPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTGDTLVPHIKHLHGVFLQC
        W  ++ S++ S+K+ LL    SE  +++       ++ + +  L  N WP+ +P + Q  S + ++ ++++  I   L      +L  HI     +F Q 
Subjt:  WPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTGDTLVPHIKHLHGVFLQC

Query:  LTSASPSTDVKIAS---FNAVISFI--QCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESL
        +   S S +++  S    N V + I  Q   N     +F   +  +   L   +       A+ +   L +    +++     +VD++ L LQIA    +
Subjt:  LTSASPSTDVKIAS---FNAVISFI--QCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESL

Query:  DEGTRHLAIEFVFALAEARE
        DE  R  A++F+ +    R+
Subjt:  DEGTRHLAIEFVFALAEARE

Q54EW3 Probable importin-5 homolog1.4e-1325.12Show/hide
Query:  LNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQL--SHSTGDTLVPHIKHLHGVFLQCL
        L P +  +LK+ L+  ++ E    I   + + ++ LA  ++P+  WPE L F+ +  SS    L+ESSF +   +       +TL PH      +  + L
Subjt:  LNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQL--SHSTGDTLVPHIKHLHGVFLQCL

Query:  TSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESLDEGTRH
            PS  V++++   V +FI   +N    + F+ L+  M  T+ +++++  E  AQ+ +   I +A   + + +     I  +  Q  E +SL++ T+H
Subjt:  TSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESLDEGTRH

Query:  LAIEFVFALAE
          + F    AE
Subjt:  LAIEFVFALAE

Q8BKC5 Importin-51.4e-1830.04Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG---WPEWLPFMFQCVSSDSLKLQESSFLIFAQLSH
        M+AVLL + L+  +  ++P L    Q ++KS LL  IQ E   S+ KK+CD  +ELA  ++ ++G   WPE L F+F  VSS ++ L+E++  IF     
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNG---WPEWLPFMFQCVSSDSLKLQESSFLIFAQLSH

Query:  STGDTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLS-NSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQL
          G+    ++  +  + +QC+        ++  S  A  +FI     N A    F DLL    + + +S     ++    VL+ L+E+A T  ++LR  L
Subjt:  STGDTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLS-NSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQL

Query:  VDIVGLMLQIAEAESLDEGTRHLAIEFVFALAE
           + L L++    +L+   R LA+E +  L+E
Subjt:  VDIVGLMLQIAEAESLDEGTRHLAIEFVFALAE

Arabidopsis top hitse value%identityAlignment
AT4G27640.1 ARM repeat superfamily protein8.4e-2228.38Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        ++AVLL K++T      W +L+P  +  +K  L+  I  E+S  + +   + VS +A   +P   WP+ L F+FQC  S     +E + ++F+ L+ + G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        +T  P+   L  + L+C+   S S+ V++A+  AV SF++  ++  +  +F+D +  +     + + +G+E  A    E+  EL  + A  L   +  IV
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAE
           L+++  ++L+  TRH AI+ V  LA+
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAE

AT5G19820.1 ARM repeat superfamily protein7.0e-9375.54Show/hide
Query:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG
        M+AVLL K LTRD +YLWPRL+ S+Q SLKS +L CIQ E++KSISKK+CDTVSELASGILP+NGWPE LPF+FQCV+S + KLQES+FLI AQLS   G
Subjt:  MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTG

Query:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV
        +TL PHIK LHGVFLQCL+S S S+DVKIA+ NAVISF+QCL+NS +RDRFQD+L  M RTL ESL+NG EATAQE LELLIELAGTE RFLRRQLVDIV
Subjt:  DTLVPHIKHLHGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIV

Query:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER
        G MLQIAEA+SL+E TRHLAIEF+  LAEARER
Subjt:  GLMLQIAEAESLDEGTRHLAIEFVFALAEARER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTGTTCTCCTCTGCAAGCAGCTAACTCGCGACTATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTAT
TCAAAGCGAGGACTCCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTCCGGAATCTTGCCGGATAATGGCTGGCCAGAATGGTTGCCGTTCATGT
TTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGTCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTG
CACGGTGTGTTTTTGCAGTGCTTGACGTCAGCCTCCCCAAGCACCGATGTGAAGATTGCGTCCTTCAATGCTGTTATCAGCTTCATACAGTGCTTGTCCAACTCTGCTGA
TCGTGACAGGTTTCAGGATTTGCTGCGACCGATGACGCGGACACTAATGGAGTCGTTGGATAACGGGCAGGAGGCAACCGCGCAAGAGGTACTTGAACTGTTGATCGAAT
TGGCCGGGACGGAGGCGAGGTTCTTAAGGCGGCAATTAGTGGATATAGTGGGGTTGATGCTGCAAATTGCAGAAGCTGAATCGTTGGACGAAGGAACGAGGCACTTGGCG
ATTGAATTTGTGTTCGCTCTTGCAGAAGCCAGGGAGCGGCAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCTGTTCTCCTCTGCAAGCAGCTAACTCGCGACTATTCCTACCTCTGGCCTCGCCTAAATCCTTCCTCTCAGTTCTCTCTCAAATCCATACTCCTCTCATGTAT
TCAAAGCGAGGACTCCAAATCCATATCGAAGAAATTGTGTGATACGGTCTCCGAGCTGGCTTCCGGAATCTTGCCGGATAATGGCTGGCCAGAATGGTTGCCGTTCATGT
TTCAGTGCGTATCGTCGGATTCCCTCAAGCTGCAGGAATCGTCTTTCTTGATTTTTGCCCAGCTTTCGCATTCTACTGGGGATACCTTGGTGCCCCACATTAAGCACTTG
CACGGTGTGTTTTTGCAGTGCTTGACGTCAGCCTCCCCAAGCACCGATGTGAAGATTGCGTCCTTCAATGCTGTTATCAGCTTCATACAGTGCTTGTCCAACTCTGCTGA
TCGTGACAGGTTTCAGGATTTGCTGCGACCGATGACGCGGACACTAATGGAGTCGTTGGATAACGGGCAGGAGGCAACCGCGCAAGAGGTACTTGAACTGTTGATCGAAT
TGGCCGGGACGGAGGCGAGGTTCTTAAGGCGGCAATTAGTGGATATAGTGGGGTTGATGCTGCAAATTGCAGAAGCTGAATCGTTGGACGAAGGAACGAGGCACTTGGCG
ATTGAATTTGTGTTCGCTCTTGCAGAAGCCAGGGAGCGGCAGTTTTGA
Protein sequenceShow/hide protein sequence
MSAVLLCKQLTRDYSYLWPRLNPSSQFSLKSILLSCIQSEDSKSISKKLCDTVSELASGILPDNGWPEWLPFMFQCVSSDSLKLQESSFLIFAQLSHSTGDTLVPHIKHL
HGVFLQCLTSASPSTDVKIASFNAVISFIQCLSNSADRDRFQDLLRPMTRTLMESLDNGQEATAQEVLELLIELAGTEARFLRRQLVDIVGLMLQIAEAESLDEGTRHLA
IEFVFALAEARERQF