; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G000220 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G000220
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtein FAM110A like
Genome locationCmo_Chr20:168748..169197
RNA-Seq ExpressionCmoCh20G000220
SyntenyCmoCh20G000220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040078.1 uncharacterized protein E6C27_scaffold366G00480 [Cucumis melo var. makuwa]7.9e-6081.88Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
        MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N   AG    GKE
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE

Query:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
            D EKEDWGESLPSSYLSSED+ELEKEMW++FYG GF RTPSQRET
Subjt:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

KAG6570325.1 hypothetical protein SDJN03_29240, partial [Cucurbita argyrosperma subsp. sororia]9.9e-7998.68Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK--AAAGGATVG
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK  AAAGGATVG
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK--AAAGGATVG

Query:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  KEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

XP_022943329.1 uncharacterized protein LOC111448127 [Cucurbita moschata]3.1e-80100Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE

Query:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

XP_022986081.1 uncharacterized protein LOC111483938 [Cucurbita maxima]1.9e-7795.42Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAA----AGGAT
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAE+AGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWN+RGKRRHITK+NKAA    AGGAT
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAA----AGGAT

Query:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

XP_023512462.1 uncharacterized protein LOC111777213 [Cucurbita pepo subsp. pepo]7.6e-7999.33Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK-AAAGGATVGK
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK AAAGGATVGK
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNK-AAAGGATVGK

Query:  EGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        EGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  EGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

TrEMBL top hitse value%identityAlignment
A0A0A0L1Q3 Uncharacterized protein1.5e-6181.88Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
        MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N  A G    G +
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE

Query:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
             GEKEDWGESLPSSYLSSED+ELEKEMW++FYGTGFWRTPSQRET
Subjt:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A1S3BMC5 uncharacterized protein LOC1034916013.2e-5981.21Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
        MNQ VLLRSPP TRQQPLL DKS N +KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N   AG    GKE
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE

Query:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
            D EKEDWGESLPSSYLSSED+ELEKEMW++FYG GF RTPSQRET
Subjt:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A5D3DDP5 Uncharacterized protein3.8e-6081.88Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
        MNQ VLLRSPP TRQQPLL DKS NR+KEK RFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKK WNKRGKRR I K+N   AG    GKE
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE

Query:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
            D EKEDWGESLPSSYLSSED+ELEKEMW++FYG GF RTPSQRET
Subjt:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A6J1FTZ9 uncharacterized protein LOC1114481271.5e-80100Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKE

Query:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  GPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

A0A6J1JA30 uncharacterized protein LOC1114839389.0e-7895.42Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAA----AGGAT
        MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAE+AGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWN+RGKRRHITK+NKAA    AGGAT
Subjt:  MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAA----AGGAT

Query:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
        VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
Subjt:  VGKEGPKHDGEKEDWGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein1.4e-2540.62Show/hide
Query:  MNQNVLLRSPPETRQQPLLTDKSP----NRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGAT
        M ++V+L+SP     +      SP    +  KE+ +  EVAGG AAECAA+ CC PC+++NL++L VYKVP  +CKKAW +  +RR   KR+   A    
Subjt:  MNQNVLLRSPPETRQQPLLTDKSP----NRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGAT

Query:  VGKEGPKHDGEKED-------WGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET
         G E   H    E+       + E   S    ++ V LE EM D+FYG GFWR+PSQ++T
Subjt:  VGKEGPKHDGEKED-------WGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET

AT3G11690.1 unknown protein2.7e-1835.63Show/hide
Query:  RQQPL----LTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGK----------
        R+QPL    L+  SP         AE  GGT A CAA+ CC PC ++NLL+L +YKVP G+C++A   R +RR    +N       T GK          
Subjt:  RQQPL----LTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGK----------

Query:  ---------EGPKHDGEKED-------WGESLPSSYLSSEDVE--------LEKEMWDQFYGTGFWRTPSQRET
                      D E +D        G+S+ + + + E+ +        LEKEMW++FYG GFWR+PSQRE+
Subjt:  ---------EGPKHDGEKED-------WGESLPSSYLSSEDVE--------LEKEMWDQFYGTGFWRTPSQRET

AT5G06380.1 unknown protein1.8e-1740.16Show/hide
Query:  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKR------NKAAAGGATVGKEGPKHDGEKEDWGESLPSSYLSSEDVEL
        AE  GGT A CAA+C C PCS++NL++L VYK+P GLC++A  +R +R+ + K+       +   GG++     P    ++E+  E    + ++     L
Subjt:  AEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKR------NKAAAGGATVGKEGPKHDGEKEDWGESLPSSYLSSEDVEL

Query:  EKEMWDQFYGTGFWRTPSQRET
        EKEMW +FY  GFWR+ SQ ET
Subjt:  EKEMWDQFYGTGFWRTPSQRET

AT5G14690.1 unknown protein8.5e-0441.07Show/hide
Query:  AGGTAAECAAICCCFPCSMMNLLILTVYKVP--VG-LCKKAWNKRGKRRHITKRNK
        A    A+C A+CCC PC+++NLL LT+ KVP  +G  C     +  K+R +  R K
Subjt:  AGGTAAECAAICCCFPCSMMNLLILTVYKVP--VG-LCKKAWNKRGKRRHITKRNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGC
CGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGG
CGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGAT
TGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAG
AGAAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAGAACGTCCTCCTCCGATCCCCGCCAGAGACTCGCCAGCAACCACTACTGACAGACAAGTCGCCCAACAGACTTAAGGAAAAGCCGCGGTTCGCGGAGGTGGC
CGGCGGAACGGCCGCGGAGTGCGCGGCAATATGCTGTTGCTTTCCATGCAGCATGATGAACCTTCTGATATTGACCGTCTACAAGGTTCCAGTGGGGCTCTGCAAAAAGG
CGTGGAATAAGAGGGGAAAACGACGTCACATCACGAAGAGAAACAAGGCGGCGGCGGGCGGTGCAACTGTAGGTAAGGAGGGGCCGAAACATGATGGTGAAAAGGAGGAT
TGGGGAGAATCGCTTCCGTCGTCGTATTTGTCATCGGAGGATGTGGAATTGGAGAAGGAGATGTGGGACCAATTTTATGGTACTGGCTTCTGGAGGACACCTTCTCAGAG
AGAAACCTAA
Protein sequenceShow/hide protein sequence
MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLILTVYKVPVGLCKKAWNKRGKRRHITKRNKAAAGGATVGKEGPKHDGEKED
WGESLPSSYLSSEDVELEKEMWDQFYGTGFWRTPSQRET