; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G001700 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G001700
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionDUF1279 domain-containing protein
Genome locationCmo_Chr20:857412..859131
RNA-Seq ExpressionCmoCh20G001700
SyntenyCmoCh20G001700
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR009688 - Protein FAM210A/B-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570471.1 Family With Sequence Similarity 210 Member B, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.9e-9587.56Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISFA CYALISAGVDVQALLQK                           VGISVDGNGEKVGTFALAYAAHKATSP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALTSVVATWIGKKVEEEN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

KAG7010336.1 hypothetical protein SDJN02_27129 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-9487.11Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPIC SSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISFA CYALISAGVDVQALLQK                           VGISVDGNGEKVGTFALAYAAHKATSP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALTSVVATWIGKKVEEEN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

XP_022943302.1 uncharacterized protein LOC111448115 [Cucurbita moschata]1.3e-9588Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQK                           VGISVDGNGEKVGTFALAYAAHKATSP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALTSVVATWIGKKVEEEN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

XP_023512163.1 uncharacterized protein LOC111776967 [Cucurbita pepo subsp. pepo]3.9e-9587.56Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPICFSSSFISSPASFPDTNFRFPFSSSV+PPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQK                           VGISVDGNGEKVGTFALAYAAHKATSP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALTSVVATWIGKKVEEEN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

XP_038901803.1 uncharacterized protein LOC120088508 [Benincasa hispida]1.2e-6771.3Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERP--SPSQSPSSSSADEVTKKYGLEAGLWKIFSSK---EEGEG
        MATA S I FSSS I    SF D NFRF F+    P KFN KR RVQALK+KTGEIERP  S S S SSSSADEVTKKYGLEAGLWKIFSSK   EEGEG
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERP--SPSQSPSSSSADEVTKKYGLEAGLWKIFSSK---EEGEG

Query:  KDKSKGDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAH
        K+KSKGDQAKELLAKYGGAYLATSITLSLISF++CYALISAGVDVQALLQK                           VGIS D  GEKVGTFALAYAAH
Subjt:  KDKSKGDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAH

Query:  KATSPIRFPPTVALTSVVATWIGKKVEEEN
        KA SPIRFPPTVALT +VA+WIGKKVE+EN
Subjt:  KATSPIRFPPTVALTSVVATWIGKKVEEEN

TrEMBL top hitse value%identityAlignment
A0A0A0KEW3 DUF1279 domain-containing protein3.7e-6770.67Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MA A S I FSS   SS  SF   NFRF F+    P KFN K  RVQALK+KTGEIERPSPS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISF++CYALISAGVDVQ LLQK                           VGIS+D  GEKVGTFALAYAAHKA SP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALT +VA+WIGKKVE+EN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

A0A1S3BN10 uncharacterized protein LOC1034914274.1e-6670.22Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATA S I FSS    S  SF   NFRF F+    P KFN K  RVQALK+KTGEI+RPSPS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISF++CYALISAGVDVQALLQK                           VGIS D  G KVGTFALAYAAHKA SP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALT +VA+WIGKKVE+EN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

A0A5D3B9U1 DUF1279 domain-containing protein4.1e-6670.22Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATA S I FSS    S  SF   NFRF F+    P KFN K  RVQALK+KTGEI+RPSPS   SSSSADEVTKKYGLEAGLWKIFSSKEEGEG +KSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISF++CYALISAGVDVQALLQK                           VGIS D  G KVGTFALAYAAHKA SP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALT +VA+WIGKKVE+EN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

A0A6J1FSN5 uncharacterized protein LOC1114481156.5e-9688Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQK                           VGISVDGNGEKVGTFALAYAAHKATSP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALTSVVATWIGKKVEEEN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

A0A6J1JG12 uncharacterized protein LOC1114841826.5e-9688Show/hide
Query:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
        MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK
Subjt:  MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSK

Query:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP
        GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQK                           VGISVDGNGEKVGTFALAYAAHKATSP
Subjt:  GDQAKELLAKYGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSP

Query:  IRFPPTVALTSVVATWIGKKVEEEN
        IRFPPTVALTSVVATWIGKKVEEEN
Subjt:  IRFPPTVALTSVVATWIGKKVEEEN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27290.1 Protein of unknown function (DUF1279)8.5e-4857.14Show/hide
Query:  FSSSVRPPKFNPKRLRVQALKEKTGEIER--PSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKD------KSKGDQAKELLAKYGGAYLATSIT
        F SSV     + K+ R +A++EK  +I++    PS SP   SA+EVTKKYGLE GLWKI SSK++ EG D      KSK D+AKELLAKYGGAYLATSIT
Subjt:  FSSSVRPPKFNPKRLRVQALKEKTGEIER--PSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKD------KSKGDQAKELLAKYGGAYLATSIT

Query:  LSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKV
        LSLISF++CY L+++GVDVQALL K                           VGIS +  GEKVG FALAYAAHKA SPIRFPPTVALT +VA WIGKKV
Subjt:  LSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKKV

Query:  EEE
        ++E
Subjt:  EEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGCTCCTTCTCCAATTTGCTTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGACACAAATTTCAGATTTCCCTTTAGTTCTTCTGTTCGACCTCC
GAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATTGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTTCAGCAGATGAAGTTA
CCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAGGAGCTGCTTGCAAAA
TATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGTGTGTTACGCGCTCATCAGTGCCGGTGTCGACGTTCAAGCTCTTCTGCAGAAGGT
AATGGCATTTAGGAAGGGTTCCCGAGTTCGTTTGATCTTGATCTTGATCAAATATGTTTCACAAAGGGAGATTGGTTTTGTAGGAATTTCGGTCGATGGGAATGGAGAGA
AAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTTCCTCCAACGGTGGCCCTTACTTCAGTGGTTGCAACTTGGATTGGGAAGAAA
GTAGAGGAAGAGAATTAG
mRNA sequenceShow/hide mRNA sequence
TATCTGGCTTACAACGCTTCACATAAAATTCTGTCTCTCTTTGATTTCGTGGGATTCTCGTTTCCCATCCTCCGAATTCAGAGGGCATGCCTCATAACTAGATTCCGACC
TCTGATTTTCTGATAATGGCGACTGCTCCTTCTCCAATTTGCTTTTCATCTTCTTTCATTTCCTCTCCTGCTTCCTTTCCCGACACAAATTTCAGATTTCCCTTTAGTTC
TTCTGTTCGACCTCCGAAATTCAATCCCAAAAGGCTCAGGGTTCAAGCCCTTAAAGAGAAAACCGGCGAAATTGAACGCCCATCTCCATCTCAATCTCCGTCTTCCTCTT
CAGCAGATGAAGTTACCAAGAAGTATGGACTTGAAGCTGGTCTCTGGAAGATATTTAGCTCAAAGGAGGAGGGTGAAGGAAAAGACAAATCAAAGGGGGATCAGGCAAAG
GAGCTGCTTGCAAAATATGGAGGTGCATATTTAGCCACCTCCATAACTCTATCCCTGATCTCTTTCGCTGTGTGTTACGCGCTCATCAGTGCCGGTGTCGACGTTCAAGC
TCTTCTGCAGAAGGTAATGGCATTTAGGAAGGGTTCCCGAGTTCGTTTGATCTTGATCTTGATCAAATATGTTTCACAAAGGGAGATTGGTTTTGTAGGAATTTCGGTCG
ATGGGAATGGAGAGAAAGTTGGAACGTTTGCATTGGCATATGCAGCGCATAAAGCAACTTCTCCAATAAGGTTTCCTCCAACGGTGGCCCTTACTTCAGTGGTTGCAACT
TGGATTGGGAAGAAAGTAGAGGAAGAGAATTAGCATAACTCTCAGTATTAGTCATTTGTTAGAGTTTTATCTAAGATATTATTTTATTTGATAGTGTATATTCAGCTAAA
TCCCATATAGATTGCATACTAAATCCCATACAGATGGGCGTTTGATTTCGAAGTTAATAAAATGGTTAAAGAGTCTCAATTTCTTATACATAGGAAAGTGGAATTTCGTG
TGTAGAGGTGAAATCCAAAGATCTACGAAGGAACTTCAAAAGCAAAGGTAGCTTGACCGTCCCTACCCACCCTGGATGCGAAAGTAGGGGAGCACATTGTTGTGTATAGA
GCCTACCAGCTTATTCAATTGTTATTATAGTAAAACTATATATACTCTTCTCATTCTCTACCGTCATTAATATCTCATTCTCCACCGTCATCGATATAAATTTTTAAC
Protein sequenceShow/hide protein sequence
MATAPSPICFSSSFISSPASFPDTNFRFPFSSSVRPPKFNPKRLRVQALKEKTGEIERPSPSQSPSSSSADEVTKKYGLEAGLWKIFSSKEEGEGKDKSKGDQAKELLAK
YGGAYLATSITLSLISFAVCYALISAGVDVQALLQKVMAFRKGSRVRLILILIKYVSQREIGFVGISVDGNGEKVGTFALAYAAHKATSPIRFPPTVALTSVVATWIGKK
VEEEN