; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G001790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G001790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWHy domain-containing protein
Genome locationCmo_Chr20:896139..896690
RNA-Seq ExpressionCmoCh20G001790
SyntenyCmoCh20G001790
Gene Ontology termsGO:0009269 - response to desiccation (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup
IPR013990 - Water stress and hypersensitive response domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061714.1 late embryogenesis abundant hydroxyproline-rich glycoprotein [Cucumis melo var. makuwa]4.2e-8791.76Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        M KKRNWSW SALVGAASA+AATAIISAKPKDPTFHLISIKFTS K+KPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFY+GS LGSA V+AGSQQ RS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL
        CQVLRLPARLDGLKLAHH SRFISDVAKREMVLDASVDIGG AKVLWW+H+FKVHVDSHLTVDPVFLDVLDQENTSQL+LFL
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL

KAG7010345.1 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-96100Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
        CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT

XP_008449575.2 PREDICTED: uncharacterized protein LOC103491417 [Cucumis melo]4.2e-8791.76Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        M KKRNWSW SALVGAASA+AATAIISAKPKDPTFHLISIKFTS K+KPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFY+GS LGSA V+AGSQQ RS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL
        CQVLRLPARLDGLKLAHH SRFISDVAKREMVLDASVDIGG AKVLWW+H+FKVHVDSHLTVDPVFLDVLDQENTSQL+LFL
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL

XP_022944418.1 uncharacterized protein LOC111448871 [Cucurbita moschata]3.8e-96100Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
        CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT

XP_038900652.1 uncharacterized protein LOC120087813 [Benincasa hispida]4.9e-8891.8Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        M KKRNWSW SALVGAASAIAATAI+SAKPKDPTFHLISIKFTS K+KPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGS LGSA V+AGSQQ RS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
        CQVLRLPARLDGLKLAHH SRFISDVAKREM+LDASVDIGG AKVLWW+H+FKVHVDSHLTVDPVFLDVLDQENTSQL+LFLT
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT

TrEMBL top hitse value%identityAlignment
A0A0A0KGW5 WHy domain-containing protein1.7e-8691.21Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        M KKRNWSW SALVGAASAIAATAIISAKPKDPTFHLISIKFTS K+KPPVVD ELILTVHVTNPNVAPIHYSSTAMSIFY+GS LGSA V+AGSQQ RS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL
        CQVLRLPARLDGLKLAHH SRFISDVAKREMVLDASVDIGG A+VLWW+H+FKVHVDSHLTVDPVFLDVLDQENTSQL+LFL
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL

A0A1S3BMZ9 uncharacterized protein LOC1034914172.0e-8791.76Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        M KKRNWSW SALVGAASA+AATAIISAKPKDPTFHLISIKFTS K+KPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFY+GS LGSA V+AGSQQ RS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL
        CQVLRLPARLDGLKLAHH SRFISDVAKREMVLDASVDIGG AKVLWW+H+FKVHVDSHLTVDPVFLDVLDQENTSQL+LFL
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL

A0A5D3B864 Late embryogenesis abundant hydroxyproline-rich glycoprotein2.0e-8791.76Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        M KKRNWSW SALVGAASA+AATAIISAKPKDPTFHLISIKFTS K+KPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFY+GS LGSA V+AGSQQ RS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL
        CQVLRLPARLDGLKLAHH SRFISDVAKREMVLDASVDIGG AKVLWW+H+FKVHVDSHLTVDPVFLDVLDQENTSQL+LFL
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFL

A0A6J1FY16 uncharacterized protein LOC1114488711.8e-96100Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
        CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT

A0A6J1JD65 uncharacterized protein LOC1114839621.8e-96100Show/hide
Query:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
        MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS
Subjt:  MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRS

Query:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
        CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
Subjt:  CQVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52330.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family3.5e-0727.34Show/hide
Query:  PKDPTFHLISIKFTSLKV--KP-PVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSCQVLRLPARLDGLKLAHHRSRFISDV
        P DP   +I +K + + V  +P P +D  L++T+ V+N +V    ++   ++I Y G  LG    + G   +     L   A LDG+ +       I D+
Subjt:  PKDPTFHLISIKFTSLKV--KP-PVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSCQVLRLPARLDGLKLAHHRSRFISDV

Query:  AKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPV
        AK  +  D   +  G   VL++    K  V   + VD V
Subjt:  AKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPV

AT1G52330.2 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family3.8e-0627.34Show/hide
Query:  PKDPTFHLISIKFTSLKV--KP-PVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSCQVLRLPARLDGLKLAHHRSRFISDV
        P DP   +I +K + + V  +P P +D  L++T+ V+N +V    ++   ++I Y G  LG    + G   +     L   A LDG+ +       I D+
Subjt:  PKDPTFHLISIKFTSLKV--KP-PVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSCQVLRLPARLDGLKLAHHRSRFISDV

Query:  AKREMVLDASVDIGGIAKVLWWNHRFKV
        AK  +  D   +  G   VL++    KV
Subjt:  AKREMVLDASVDIGGIAKVLWWNHRFKV

AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family7.1e-6969.78Show/hide
Query:  EKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSC
        ++K  WSW SAL+GAASA AA +++SAKPKDPTFHLISI  TSLK+  PV+DAEL+LTVHVTNPN+A IHYSST M+I YDG+ LGSA V+AGSQ +RSC
Subjt:  EKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSC

Query:  QVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT
        Q+LRLPARLDG++LA H  +F SDVA REM L+A + I G AKVLWW+H F+VHVDS +TVDPVFLDV+ QEN SQ+ LFLT
Subjt:  QVLRLPARLDGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGCGTAATTGGAGCTGGGGCTCCGCCCTCGTCGGAGCTGCGTCGGCGATTGCTGCGACGGCGATCATTTCCGCCAAGCCCAAGGACCCGACCTTCCACCT
GATCTCTATAAAGTTCACTTCCCTCAAGGTGAAGCCGCCGGTGGTGGACGCGGAGCTCATCCTGACCGTCCACGTTACCAACCCCAACGTGGCTCCTATCCACTACTCCT
CCACCGCCATGTCCATTTTCTACGACGGCTCCCATCTGGGGTCTGCCCTGGTCGAGGCCGGTTCGCAGCAGTCCCGGTCCTGCCAGGTTCTCCGCCTCCCGGCCCGGCTA
GACGGCCTGAAGCTGGCCCACCATCGCAGTCGGTTCATCTCCGATGTGGCGAAGCGGGAGATGGTTCTAGATGCTAGTGTGGACATTGGGGGAATTGCGAAAGTGCTGTG
GTGGAATCACAGGTTCAAGGTGCACGTGGACAGCCATCTGACCGTTGATCCCGTCTTCCTGGATGTGCTTGATCAGGAAAATACTTCTCAACTTAAGCTGTTTCTTACAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGCGTAATTGGAGCTGGGGCTCCGCCCTCGTCGGAGCTGCGTCGGCGATTGCTGCGACGGCGATCATTTCCGCCAAGCCCAAGGACCCGACCTTCCACCT
GATCTCTATAAAGTTCACTTCCCTCAAGGTGAAGCCGCCGGTGGTGGACGCGGAGCTCATCCTGACCGTCCACGTTACCAACCCCAACGTGGCTCCTATCCACTACTCCT
CCACCGCCATGTCCATTTTCTACGACGGCTCCCATCTGGGGTCTGCCCTGGTCGAGGCCGGTTCGCAGCAGTCCCGGTCCTGCCAGGTTCTCCGCCTCCCGGCCCGGCTA
GACGGCCTGAAGCTGGCCCACCATCGCAGTCGGTTCATCTCCGATGTGGCGAAGCGGGAGATGGTTCTAGATGCTAGTGTGGACATTGGGGGAATTGCGAAAGTGCTGTG
GTGGAATCACAGGTTCAAGGTGCACGTGGACAGCCATCTGACCGTTGATCCCGTCTTCCTGGATGTGCTTGATCAGGAAAATACTTCTCAACTTAAGCTGTTTCTTACAT
GA
Protein sequenceShow/hide protein sequence
MEKKRNWSWGSALVGAASAIAATAIISAKPKDPTFHLISIKFTSLKVKPPVVDAELILTVHVTNPNVAPIHYSSTAMSIFYDGSHLGSALVEAGSQQSRSCQVLRLPARL
DGLKLAHHRSRFISDVAKREMVLDASVDIGGIAKVLWWNHRFKVHVDSHLTVDPVFLDVLDQENTSQLKLFLT