; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G002020 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G002020
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptioncytochrome-c oxidases;electron carriers
Genome locationCmo_Chr20:992134..997081
RNA-Seq ExpressionCmoCh20G002020
SyntenyCmoCh20G002020
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039296 - Predicted cytochrome c oxidase subunit VII
IPR039297 - Cytochrome c oxidase subunit VII


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646907.1 hypothetical protein Csa_021033 [Cucumis sativus]3.4e-3151.3Show/hide
Query:  PARNLLRSKNISRAFTSTLILKGQW--IRSLLLPFQL----------------LLQLHHCFLS-DEEFITCRTELERKNEK-----------KSSSIIHP
        P   L+  + I ++      LKG    I S+ +P  L                 + L H FL+ DEEF TCRTEL RKNEK             +  +  
Subjt:  PARNLLRSKNISRAFTSTLILKGQW--IRSLLLPFQL----------------LLQLHHCFLS-DEEFITCRTELERKNEK-----------KSSSIIHP

Query:  HQRHPSDRRF-LALLKGETSKFMMT---EQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        +   PS   F   +     +KF MT   EQPFRPREKLIERQK FQSI KHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  HQRHPSDRRF-LALLKGETSKFMMT---EQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

KAG6606001.1 hypothetical protein SDJN03_03318, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2840.51Show/hide
Query:  ISPEAGADGERRIEENFWRRPAMLLTVFRSLSFTAFGSRGFSFDIRQVLIVPSPSSAAASEETIYRSPSSQWRNNLLDPARNLLRSKNISRAFTSTLILK
        ++PEAGADG+ R EE+F   P MLLT+FRSLS TA GSRGF F                                      N L   N++          
Subjt:  ISPEAGADGERRIEENFWRRPAMLLTVFRSLSFTAFGSRGFSFDIRQVLIVPSPSSAAASEETIYRSPSSQWRNNLLDPARNLLRSKNISRAFTSTLILK

Query:  GQWIRSLLLPFQLLLQLHHCFLSDEEFITCRTELERKNEKKSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKG
                                                                              MTEQPFRPREKLIERQKYFQSI KHTYLKG
Subjt:  GQWIRSLLLPFQLLLQLHHCFLSDEEFITCRTELERKNEKKSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKG

Query:  PLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        P+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  PLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

KAG6606002.1 hypothetical protein SDJN03_03319, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3077.32Show/hide
Query:  KSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        KSSSII   QR  S++RFL +    +SKF M+E+PFRPREKLIE+QKYFQSI KHTYLKGP+DKVTSVAIP+ALAASSLYLIGRGIYNM+HGIGKKE
Subjt:  KSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

KAG7035952.1 hypothetical protein SDJN02_02752, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3078.35Show/hide
Query:  KSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        KSSSII   QR  S++RFL +    +SKF M+E+PFRPREKLIE+QKYFQSI KHTYLKGP+DKVTSVAIP+ALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  KSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

XP_022943457.1 uncharacterized protein LOC111448217 [Cucurbita moschata]1.6e-28100Show/hide
Query:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

TrEMBL top hitse value%identityAlignment
A0A6J1FT34 uncharacterized protein LOC1114482177.7e-29100Show/hide
Query:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1H2N1 uncharacterized protein LOC111459140 isoform X12.5e-2795.52Show/hide
Query:  MTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTEQPFRPREKLIERQKYFQSI KHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1J9Z9 uncharacterized protein LOC1114839067.7e-29100Show/hide
Query:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1K6C6 uncharacterized protein LOC111491558 isoform X22.5e-2795.52Show/hide
Query:  MTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTEQPFRPREKLIERQKYFQSI KHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1K8A8 uncharacterized protein LOC111491558 isoform X12.5e-2795.52Show/hide
Query:  MTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        MTEQPFRPREKLIERQKYFQSI KHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21105.1 cytochrome-c oxidases;electron carriers3.2e-2782.35Show/hide
Query:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        M+TE PFRPREKL+E+Q+ FQSIQ+HTYLKGP+DK+TSVAIPIALAASSLY+IG GIYNMS+GIGKKE
Subjt:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

AT4G21105.2 cytochrome-c oxidases;electron carriers7.7e-1373.81Show/hide
Query:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIP
        M+TE PFRPREKL+E+Q+ FQSIQ+HTYLKGP+DK+TS+ IP
Subjt:  MMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDKVTSVAIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAATTTGGTGGCTTAGGGAACCAACAACCAGTGGAGAGCGAGAAATCAGTCCGGAAGCTGGAGCGGATGGGGAAAGAAGAATCGAGGAGAACTTTTGGCGGAGGCC
TGCGATGCTGCTAACAGTGTTTCGCAGCTTGTCGTTTACCGCCTTCGGATCCCGCGGTTTTTCATTTGACATTCGCCAAGTCCTCATCGTTCCTTCGCCCTCATCTGCTG
CAGCTTCTGAAGAAACGATTTACCGCTCTCCATCGTCACAATGGCGGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATATTTCCAGAGCATTCACA
AGCACACTTATCTTAAAGGGCCAATGGATAAGGTCACTTCTGTTGCCATTCCAATTGCTTTTGCAGCTTCATCACTGTTTCTTATCGGACGAGGAATTTATAACATGTCG
AACGGAATTGGAAAGAAAGAATGAGAAGAAGTCATCGTCTATCATTCACCCCCATCAGCGGCACCCTTCGGATCGACGATTTCTCGCTCTCCTGAAAGGTGAAACCTCCA
AATTCATGATGACTGAACAGCCGTTTAGGCCGCGTGAGAAACTGATTGAAAGGCAAAAGTATTTCCAGAGCATCCAGAAGCACACATATCTTAAAGGGCCATTGGATAAG
GTCACCTCTGTTGCCATCCCAATTGCTTTGGCAGCTTCATCCTTGTATCTTATAGGACGAGGAATTTATAACATGTCTCATGGGATTGGGAAGAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAATTTGGTGGCTTAGGGAACCAACAACCAGTGGAGAGCGAGAAATCAGTCCGGAAGCTGGAGCGGATGGGGAAAGAAGAATCGAGGAGAACTTTTGGCGGAGGCC
TGCGATGCTGCTAACAGTGTTTCGCAGCTTGTCGTTTACCGCCTTCGGATCCCGCGGTTTTTCATTTGACATTCGCCAAGTCCTCATCGTTCCTTCGCCCTCATCTGCTG
CAGCTTCTGAAGAAACGATTTACCGCTCTCCATCGTCACAATGGCGGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATATTTCCAGAGCATTCACA
AGCACACTTATCTTAAAGGGCCAATGGATAAGGTCACTTCTGTTGCCATTCCAATTGCTTTTGCAGCTTCATCACTGTTTCTTATCGGACGAGGAATTTATAACATGTCG
AACGGAATTGGAAAGAAAGAATGAGAAGAAGTCATCGTCTATCATTCACCCCCATCAGCGGCACCCTTCGGATCGACGATTTCTCGCTCTCCTGAAAGGTGAAACCTCCA
AATTCATGATGACTGAACAGCCGTTTAGGCCGCGTGAGAAACTGATTGAAAGGCAAAAGTATTTCCAGAGCATCCAGAAGCACACATATCTTAAAGGGCCATTGGATAAG
GTCACCTCTGTTGCCATCCCAATTGCTTTGGCAGCTTCATCCTTGTATCTTATAGGACGAGGAATTTATAACATGTCTCATGGGATTGGGAAGAAAGAATGAGGGTGACA
CAGTCTCTCAGCATCTTAATTGCATAGAGGTTTTTAACTTCTGGACCTATGTTAATTTTGTTATTGAAGAAATGTTTGTCCAATAATTGCTTAGTTGCAGACCTCGGCTA
CCATTTGATTTGAATATCATTCTCAGATTCCTTGTTGTTTTCCCCACTTTTTGGGAAACTGTGCTGGTGCAAATAAGATTTGAGCAACATATCCAGAATAGTTCTTTTTC
TTACCGTCTATTGTGAAGTTCGGATGTTTGTACATAAGTTTTATAGAGCCCATGTCAAAATTTAAATTTAATTTTAT
Protein sequenceShow/hide protein sequence
MRIWWLREPTTSGEREISPEAGADGERRIEENFWRRPAMLLTVFRSLSFTAFGSRGFSFDIRQVLIVPSPSSAAASEETIYRSPSSQWRNNLLDPARNLLRSKNISRAFT
STLILKGQWIRSLLLPFQLLLQLHHCFLSDEEFITCRTELERKNEKKSSSIIHPHQRHPSDRRFLALLKGETSKFMMTEQPFRPREKLIERQKYFQSIQKHTYLKGPLDK
VTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE