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CmoCh20G002090 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G002090
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionProtochlorophyllide reductase B
Genome locationCmo_Chr20:1017197..1018771
RNA-Seq ExpressionCmoCh20G002090
SyntenyCmoCh20G002090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1896447.1 hypothetical protein Lal_00034145 [Lupinus albus]5.4e-1138.31Show/hide
Query:  CKSFPGFFFRYIALGDAFAPSKSPPSIMVELFRPFKPLASPLRSPRFA-------------------------FGGTFPANACEEEVTK--VISPNTEFK
        CK  P F    ++L  A APSK PPSIM E+F PFKP A+PL+SPR +                         F    PA+     V +  + +  T   
Subjt:  CKSFPGFFFRYIALGDAFAPSKSPPSIMVELFRPFKPLASPLRSPRFA-------------------------FGGTFPANACEEEVTK--VISPNTEFK

Query:  AFSARALAVARPSPEEAPVMITFPFLKVLFPSDGAWLISEIVAVWALMAPSGNL
          SARALA ARP+PEEAPV  T PFLKV  PS   ++ + +V   A  +P+  L
Subjt:  AFSARALAVARPSPEEAPVMITFPFLKVLFPSDGAWLISEIVAVWALMAPSGNL

TrEMBL top hitse value%identityAlignment
A0A0A9IE60 Protochlorophyllide reductase B1.5e-0675Show/hide
Query:  AFAPSKSPPSIMVELFRPFKPLASPLRSPRFAFGGTFPAN
        AFAPS SPPSI+ +   PF P ASP RSPRFAFGGTFPAN
Subjt:  AFAPSKSPPSIMVELFRPFKPLASPLRSPRFAFGGTFPAN

A0A6A5PF86 Uncharacterized protein2.6e-1138.31Show/hide
Query:  CKSFPGFFFRYIALGDAFAPSKSPPSIMVELFRPFKPLASPLRSPRFA-------------------------FGGTFPANACEEEVTK--VISPNTEFK
        CK  P F    ++L  A APSK PPSIM E+F PFKP A+PL+SPR +                         F    PA+     V +  + +  T   
Subjt:  CKSFPGFFFRYIALGDAFAPSKSPPSIMVELFRPFKPLASPLRSPRFA-------------------------FGGTFPANACEEEVTK--VISPNTEFK

Query:  AFSARALAVARPSPEEAPVMITFPFLKVLFPSDGAWLISEIVAVWALMAPSGNL
          SARALA ARP+PEEAPV  T PFLKV  PS   ++ + +V   A  +P+  L
Subjt:  AFSARALAVARPSPEEAPVMITFPFLKVLFPSDGAWLISEIVAVWALMAPSGNL

A0A7C9D475 Uncharacterized protein9.0e-0463.04Show/hide
Query:  ARALAVARPSPEEAPVMITFPFLKVLFPSDGAWLI-SEIVAVWALM
        ARALAVARPSP++APV+ T PFL V F S  A LI  ++V VWAL+
Subjt:  ARALAVARPSPEEAPVMITFPFLKVLFPSDGAWLI-SEIVAVWALM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGTATGATCTTGAAACAGTTTCACAAGCAGATATTTCTGAAGACATGGCTGACCTGTGCAAGTCGTTTCCCGGCTTCTTCTTCAGATACATAGCCCTTGGTGA
TGCCTTTGCTCCATCAAAATCTCCTCCATCTATCATGGTCGAGCTGTTCAGGCCATTCAAACCACTTGCTAGCCCTCTCAGATCACCCAGGTTTGCTTTTGGGGGCACAT
TCCCAGCCAATGCGTGTGAGGAGGAAGTGACCAAGGTGATTAGTCCCAACACTGAGTTCAAAGCCTTCAGCGCTAGAGCCTTGGCCGTGGCTAGACCCAGTCCCGAGGAA
GCTCCTGTAATGATAACATTTCCTTTCCTCAAGGTCTTGTTTCCTTCCGATGGCGCCTGGTTGATTTCTGAAATTGTTGCAGTCTGGGCTCTAATGGCTCCATCAGGTAA
TCTTCCTTGCTACATGTTCATGGATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGTATGATCTTGAAACAGTTTCACAAGCAGATATTTCTGAAGACATGGCTGACCTGTGCAAGTCGTTTCCCGGCTTCTTCTTCAGATACATAGCCCTTGGTGA
TGCCTTTGCTCCATCAAAATCTCCTCCATCTATCATGGTCGAGCTGTTCAGGCCATTCAAACCACTTGCTAGCCCTCTCAGATCACCCAGGTTTGCTTTTGGGGGCACAT
TCCCAGCCAATGCGTGTGAGGAGGAAGTGACCAAGGTGATTAGTCCCAACACTGAGTTCAAAGCCTTCAGCGCTAGAGCCTTGGCCGTGGCTAGACCCAGTCCCGAGGAA
GCTCCTGTAATGATAACATTTCCTTTCCTCAAGGTCTTGTTTCCTTCCGATGGCGCCTGGTTGATTTCTGAAATTGTTGCAGTCTGGGCTCTAATGGCTCCATCAGGTAA
TCTTCCTTGCTACATGTTCATGGATAGATAA
Protein sequenceShow/hide protein sequence
MAMYDLETVSQADISEDMADLCKSFPGFFFRYIALGDAFAPSKSPPSIMVELFRPFKPLASPLRSPRFAFGGTFPANACEEEVTKVISPNTEFKAFSARALAVARPSPEE
APVMITFPFLKVLFPSDGAWLISEIVAVWALMAPSGNLPCYMFMDR