CuGenDBv2

Gene ID	CmoCh20G002230
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Protein kinase domain-containing protein
Genome location	Cmo_Chr20:1073241..1075646
RNA-Seq Expression	CmoCh20G002230
Synteny	CmoCh20G002230
Gene Ontology terms	GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0005634 - nucleus (cellular component) GO:0004693 - cyclin-dependent protein serine/threonine kinase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008353 - RNA polymerase II CTD heptapeptide repeat kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570516.1 putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]

8.0e-29

98.53

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

KAG6570519.1 putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. sororia]

8.0e-29

98.53

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

KAG7010377.1 putative serine/threonine-protein kinase, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.0e-29

98.53

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

XP_022943708.1 probable serine/threonine-protein kinase At1g54610 [Cucurbita moschata]

8.0e-29

98.53

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

XP_023512991.1 probable serine/threonine-protein kinase At1g54610 [Cucurbita pepo subsp. pepo]

2.3e-28

97.06

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNN DKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BIS7 probable serine/threonine-protein kinase At1g54610 isoform X1

1.5e-25

89.55

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Query:  AYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        AYGTDMNKLYTSGP+LGPSNNLD+ILKE+DRQIQEYARQARH KA + QSKGSRATTGKHLMLSHGM
Subjt:  AYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

A0A1S3BK93 probable serine/threonine-protein kinase At1g54610 isoform X3

1.2e-25

86.96

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Query:  QFAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        + AYGTDMNKLYTSGP+LGPSNNLD+ILKE+DRQIQEYARQARH KA + QSKGSRATTGKHLMLSHGM
Subjt:  QFAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

A0A5D3C133 Putative serine/threonine-protein kinase

1.5e-25

89.55

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Query:  AYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        AYGTDMNKLYTSGP+LGPSNNLD+ILKE+DRQIQEYARQARH KA + QSKGSRATTGKHLMLSHGM
Subjt:  AYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

A0A6J1FXA7 probable serine/threonine-protein kinase At1g54610

3.9e-29

98.53

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

A0A6J1J676 probable serine/threonine-protein kinase At1g54610

2.5e-28

95.59

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Query:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM
        FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQE+ARQARHG+AANIQSKGSRATTGKHLMLSHG+
Subjt:  FAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGM

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G03740.1 Protein kinase superfamily protein

1.5e-04

48.72

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Query:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQA
        Y    +K+Y SGPLL   + +D++L+E DRQ+QE+ RQA
Subjt:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQA

AT1G53050.1 Protein kinase superfamily protein

1.6e-06

47.92

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Query:  VQFAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKA
        +   YG+  +K++ SGPL+ PS N+D++LK+ DR IQE  R+AR  KA
Subjt:  VQFAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKA

AT4G10010.1 Protein kinase superfamily protein

1.5e-04

44.44

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Query:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAA
        Y    N+++ SGPL+ P  N++ ILK+ +RQIQE  R++R  K+A
Subjt:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAA

AT5G44290.1 Protein kinase superfamily protein

1.5e-04

47.62

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Query:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQ-ARH
        Y +  NK+Y SGPLL     +D++L+E DRQ+Q++ RQ A+H
Subjt:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQ-ARH

AT5G44290.2 Protein kinase superfamily protein

1.5e-04

47.62

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Query:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQ-ARH
        Y +  NK+Y SGPLL     +D++L+E DRQ+Q++ RQ A+H
Subjt:  YGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQ-ARH

Sequences

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CDS sequence

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ATGAATGATGTTCTGCTGCCTGAGATGCTGATTTTTGTTCATTATGTGGTTCAGTTTGCTTATGGGACAGACATGAACAAGCTTTATACCTCTGGTCCACTCCTTGGTCC
ATCAAACAACTTGGATAAAATTCTAAAAGAGAAAGACCGTCAAATTCAAGAATATGCTCGACAAGCACGACACGGTAAAGCTGCTAACATTCAGTCAAAGGGTTCGAGAG
CAACAACTGGAAAACATCTCATGTTGAGCCATGGAATGCTGATAATTTGTACAGAAATAGCAACCATAGATTTGTTAGATTTCTTTACGGGAAAAAATCTCGATAGCCCA
TATTCGAAAGTGGACTTTTTTGTATTTAATAATATGGATTATGAGTGGAATGGGTCCCACGTGATAGGGGTCGATTACGATTATTTGGGCTATAAAATTTTAAAATTTCA
GCGACGTGTTCGACGAACAACCAGAGCAATGAAATCCAACGGAGAAAAATCAAGCTAG

mRNA sequence

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Protein sequence

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MNDVLLPEMLIFVHYVVQFAYGTDMNKLYTSGPLLGPSNNLDKILKEKDRQIQEYARQARHGKAANIQSKGSRATTGKHLMLSHGMLIICTEIATIDLLDFFTGKNLDSP
YSKVDFFVFNNMDYEWNGSHVIGVDYDYLGYKILKFQRRVRRTTRAMKSNGEKSS

CmoCh20G002230 (gene) of Cucurbita moschata (Rifu) v1 genome