; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G002370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G002370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:1157143..1158220
RNA-Seq ExpressionCmoCh20G002370
SyntenyCmoCh20G002370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570533.1 hypothetical protein SDJN03_29448, partial [Cucurbita argyrosperma subsp. sororia]4.8e-8092.47Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLK-------NVVKDAVGTINLVNLSRSTLKESISSSASITLEDVI
        MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLK       NVVK+AVG+INLVNLSRSTLKESISSSASITLEDVI
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLK-------NVVKDAVGTINLVNLSRSTLKESISSSASITLEDVI

Query:  SDLKNLEWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
        SDLK LEWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKS  KLRVLSE YSQEVE IDGVSSSCASKKPGSESQSKRKKTAA
Subjt:  SDLKNLEWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA

XP_022944661.1 uncharacterized protein LOC111449050 [Cucurbita moschata]4.1e-87100Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
        MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE

Query:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
        WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
Subjt:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA

XP_022986041.1 uncharacterized protein LOC111483895 [Cucurbita maxima]1.1e-8196.09Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
        MED RKQ AERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVK+AVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE

Query:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
        WQECSVTSVLNFSSWKQNNSD SPDRQEPTSASKKSGKKLRVLSE  SQEVE IDGVSSSCASKKPGSESQSKRKKTAA
Subjt:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA

XP_023512485.1 uncharacterized protein LOC111777222 [Cucurbita pepo subsp. pepo]3.9e-8295.53Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
        MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE

Query:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
        WQECSVTSVLNFSSW QNNSD SPDR+EPTSASKKSGKKLRV SE YSQEVE +DGVSSSCASKK GSESQSKRKKTAA
Subjt:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA

XP_038902525.1 uncharacterized protein LOC120089183 [Benincasa hispida]2.5e-6076.92Show/hide
Query:  MEDHRKQNAERLR-KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNL
        M+DH KQN ERLR KK NKISLEDYLDFFSS KQ FL V +L+QIIRMHGYMNIKG KNV+ DAV TI+L+NLSRSTLKESISSSA+I LE VISDL+NL
Subjt:  MEDHRKQNAERLR-KKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNL

Query:  EWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGS--ESQSKRKKTAA
        EWQEC VTSVLNF+SWKQNNSD SPD Q+PT ASKK  KKLR+  E   +E+E IDGVSSS ASKKPGS  E QSKRKKTAA
Subjt:  EWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGS--ESQSKRKKTAA

TrEMBL top hitse value%identityAlignment
A0A2I4DKW1 uncharacterized protein LOC1089811606.1e-2044.31Show/hide
Query:  RKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNI-KGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLN
        R+K  K++LE+Y+DFF S KQL L +  LNQ+I MHG   I +  K VV DAV T++L++ SR TL +++SS A + LEDVI+DL  L+WQEC VTS+  
Subjt:  RKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNI-KGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLN

Query:  FSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSC-ASKKPGSE-SQSKRKK
         +SWK +  D S  +Q P   S + G              E  DG SSSC    +PG +  +SKRK+
Subjt:  FSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSC-ASKKPGSE-SQSKRKK

A0A6A1VCA4 Uncharacterized protein1.4e-2144.57Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGL-KNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNL
        ME  R+    ++R KS+KISLE+Y++F  S KQL L   +LNQII MHG+  +  + KNV+ DAV T++LV+ SRSTL ES+SS   + LEDVI+DL +L
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGL-KNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNL

Query:  EWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSC--ASKKPGSESQ--SKRKKTAA
         WQEC VTS+    SW  + S   P+   P  +  K              EV   DG SSSC   SK  G   +  SKRK+T A
Subjt:  EWQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSC--ASKKPGSESQ--SKRKKTAA

A0A6J1D6A0 uncharacterized protein LOC1110180224.8e-4164.24Show/hide
Query:  NKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWK
        +KISLEDYLDFFSS+ QL L V YL QII+MHGY  I   K+V+++AV  I+L+N SRSTL+ES+SSSASI LEDVISDLK+L+W EC  TSV+ FSS  
Subjt:  NKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVLNFSSWK

Query:  QNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSE--SQSKRKKTAA
        QN+S  SPD QEPT ASKK  +KLR L ER  Q     DGVSSSCASK    +   QSKRKKTAA
Subjt:  QNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSE--SQSKRKKTAA

A0A6J1FV08 uncharacterized protein LOC1114490502.0e-87100Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
        MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE

Query:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
        WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
Subjt:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA

A0A6J1J9Y9 uncharacterized protein LOC1114838955.6e-8296.09Show/hide
Query:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
        MED RKQ AERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVK+AVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE
Subjt:  MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLE

Query:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA
        WQECSVTSVLNFSSWKQNNSD SPDRQEPTSASKKSGKKLRVLSE  SQEVE IDGVSSSCASKKPGSESQSKRKKTAA
Subjt:  WQECSVTSVLNFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06320.1 unknown protein2.5e-1840.48Show/hide
Query:  KISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGL-KNVVKDAVGTINLVNLSRSTLK---ESISSSASITLEDVISDLKNLEWQECSVTSVLNFS
        KI++E+Y++F +S   +   +AYLNQI+ +HG+  +  L K +V++AV +++L++LSRSTLK   +S  SS+S+TL++VISD++ L+WQEC  TS+   +
Subjt:  KISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGL-KNVVKDAVGTINLVNLSRSTLK---ESISSSASITLEDVISDLKNLEWQECSVTSVLNFS

Query:  SWKQNNSDTSPDRQEPTSASKKSGKK
        S +   S+ S  +Q+     K + KK
Subjt:  SWKQNNSDTSPDRQEPTSASKKSGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCACCGAAAACAGAACGCAGAACGGCTACGGAAGAAGAGTAATAAGATCTCTCTCGAGGACTACCTCGATTTCTTCTCCTCCGACAAGCAACTATTCCTCCC
CGTCGCTTATCTCAATCAGATCATTCGCATGCATGGCTACATGAATATCAAAGGTCTGAAGAATGTAGTGAAGGATGCCGTAGGTACAATTAATCTGGTCAATCTCTCTC
GTTCCACACTCAAAGAGAGCATCTCATCATCCGCGTCCATTACGCTTGAGGACGTAATCTCGGACCTCAAAAACCTCGAATGGCAAGAATGCAGTGTGACATCTGTTCTG
AATTTCAGTTCCTGGAAGCAGAATAACTCCGATACGAGTCCGGACCGCCAGGAGCCGACTAGTGCCTCAAAGAAGTCAGGAAAGAAATTACGAGTATTGAGTGAACGTTA
TAGTCAAGAAGTCGAGGAAATTGATGGAGTTTCCTCGTCCTGTGCCTCGAAGAAGCCGGGAAGTGAATCTCAGAGTAAGAGAAAGAAAACAGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATCACCGAAAACAGAACGCAGAACGGCTACGGAAGAAGAGTAATAAGATCTCTCTCGAGGACTACCTCGATTTCTTCTCCTCCGACAAGCAACTATTCCTCCC
CGTCGCTTATCTCAATCAGATCATTCGCATGCATGGCTACATGAATATCAAAGGTCTGAAGAATGTAGTGAAGGATGCCGTAGGTACAATTAATCTGGTCAATCTCTCTC
GTTCCACACTCAAAGAGAGCATCTCATCATCCGCGTCCATTACGCTTGAGGACGTAATCTCGGACCTCAAAAACCTCGAATGGCAAGAATGCAGTGTGACATCTGTTCTG
AATTTCAGTTCCTGGAAGCAGAATAACTCCGATACGAGTCCGGACCGCCAGGAGCCGACTAGTGCCTCAAAGAAGTCAGGAAAGAAATTACGAGTATTGAGTGAACGTTA
TAGTCAAGAAGTCGAGGAAATTGATGGAGTTTCCTCGTCCTGTGCCTCGAAGAAGCCGGGAAGTGAATCTCAGAGTAAGAGAAAGAAAACAGCTGCTTAAAAGTGGTGAG
AAAGATGG
Protein sequenceShow/hide protein sequence
MEDHRKQNAERLRKKSNKISLEDYLDFFSSDKQLFLPVAYLNQIIRMHGYMNIKGLKNVVKDAVGTINLVNLSRSTLKESISSSASITLEDVISDLKNLEWQECSVTSVL
NFSSWKQNNSDTSPDRQEPTSASKKSGKKLRVLSERYSQEVEEIDGVSSSCASKKPGSESQSKRKKTAA